; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg28082 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28082
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncoiled-coil domain-containing protein SCD2 isoform X2
Genome locationCarg_Chr12:10781530..10783539
RNA-Seq ExpressionCarg28082
SyntenyCarg28082
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021132.1 Coiled-coil domain-containing protein SCD2, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-2573.91Show/hide
Query:  SGGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPT
        +GGIGLAGGRSV+            EP  SGHVGLG    +TVNHMEQPMSARTALGQRPSRSDTNAEQAP+TRTST  RPSQLPNSVEQPT
Subjt:  SGGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPT

KAG7021170.1 hypothetical protein SDJN02_17858 [Cucurbita argyrosperma subsp. argyrosperma]4.3e-52100Show/hide
Query:  MAHHARSGGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPTCY
        MAHHARSGGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPTCY
Subjt:  MAHHARSGGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPTCY

Query:  SYSIS
        SYSIS
Subjt:  SYSIS

XP_023537927.1 coiled-coil domain-containing protein SCD2 isoform X1 [Cucurbita pepo subsp. pepo]2.6e-2573.91Show/hide
Query:  SGGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPT
        +GGIGLAGGRSV+            EP  SGHVGLG    +TVNHMEQPMSARTALGQRPSRSDTNAEQAP+TRTST+ RPSQLPNSVEQPT
Subjt:  SGGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPT

XP_023537930.1 coiled-coil domain-containing protein SCD2 isoform X2 [Cucurbita pepo subsp. pepo]2.6e-2573.91Show/hide
Query:  SGGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPT
        +GGIGLAGGRSV+            EP  SGHVGLG    +TVNHMEQPMSARTALGQRPSRSDTNAEQAP+TRTST+ RPSQLPNSVEQPT
Subjt:  SGGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPT

XP_023537931.1 coiled-coil domain-containing protein SCD2 isoform X3 [Cucurbita pepo subsp. pepo]2.6e-2573.91Show/hide
Query:  SGGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPT
        +GGIGLAGGRSV+            EP  SGHVGLG    +TVNHMEQPMSARTALGQRPSRSDTNAEQAP+TRTST+ RPSQLPNSVEQPT
Subjt:  SGGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPT

TrEMBL top hitse value%identityAlignment
A0A5D3D4B6 Coiled-coil domain-containing protein SCD2 isoform X22.3e-1149Show/hide
Query:  SGGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQ-PTCYSYSIS
        +G IGLA GRSV+            E    GHVG      +TVN +EQ +S R+ LG RP+ SD N EQ P+TRTST  R SQL NS+EQ P+  S SIS
Subjt:  SGGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQ-PTCYSYSIS

A0A6J1FI09 coiled-coil domain-containing protein SCD2 isoform X12.1e-2573.91Show/hide
Query:  SGGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPT
        +GGIGLAGGRSV+            EP  SGHVGLG    +TVNHMEQPMSARTALGQRPSRSDTNAEQAP+TRTST  RPSQLPNSVEQPT
Subjt:  SGGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPT

A0A6J1FIV2 coiled-coil domain-containing protein SCD2 isoform X22.1e-2573.91Show/hide
Query:  SGGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPT
        +GGIGLAGGRSV+            EP  SGHVGLG    +TVNHMEQPMSARTALGQRPSRSDTNAEQAP+TRTST  RPSQLPNSVEQPT
Subjt:  SGGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPT

A0A6J1HKU2 coiled-coil domain-containing protein SCD2-like isoform X15.9e-2371.43Show/hide
Query:  GGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPT
        G IGLA GRSV+            EP  SGHVGLG    +TVNHMEQPMSARTALGQRPSRSDTNAEQAP+TRTST  RPSQL NSVEQPT
Subjt:  GGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPT

A0A6J1HPI8 coiled-coil domain-containing protein SCD2-like isoform X25.9e-2371.43Show/hide
Query:  GGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPT
        G IGLA GRSV+            EP  SGHVGLG    +TVNHMEQPMSARTALGQRPSRSDTNAEQAP+TRTST  RPSQL NSVEQPT
Subjt:  GGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACACCATGCGCGATCAGGGGGCATTGGATTAGCAGGTGGAAGATCAGTTCAGATCCCGCTCTCCTATGCCGTCTGCTCGTACTGTTCAGAACCTAACTTCTCTGG
ACATGTGGGATTGGGGGTCGACCATCTCAAAACTGTAAATCATATGGAGCAACCAATGTCGGCTCGTACAGCGCTAGGACAACGACCATCTCGTTCTGATACTAATGCTG
AACAAGCACCATTAACTCGCACTTCAACGCTAGTTCGACCATCCCAGCTTCCCAACTCCGTAGAGCAACCTACATGCTACTCGTACAGCATCAGTTAG
mRNA sequenceShow/hide mRNA sequence
AAAGAACAAACAGATTCGCATTGCGTTACTTGATTCCGTCGTCTTTTCTCAAACCTCCTCCGTGTTCGTGTTGGACTCTTTCCATTTCGTTACTTGCTTCGATTTCCAGC
AAACGACATTAGCAATCCATTTTCGCTATCATGGAGGTTTAATCGGGAGAAGTTTGTTTTTCCAATCTGTACGTCGAGATTCAATGTCGCTGAATATGAATTAGTTAGTG
AGTCGATTGCAACGGACGATCTGATTTTTCGAATCCACTGCTCGAAGATCACAAAGGAGCTATGGATCGGATTAAACCAGTATACACTCGACAGAAAAAGTAACGCTGGC
ACCCCACTGGGACCAGCGTCGCCATTGCGTACAACCGTACAAATGGCACACCATGCGCGATCAGGGGGCATTGGATTAGCAGGTGGAAGATCAGTTCAGATCCCGCTCTC
CTATGCCGTCTGCTCGTACTGTTCAGAACCTAACTTCTCTGGACATGTGGGATTGGGGGTCGACCATCTCAAAACTGTAAATCATATGGAGCAACCAATGTCGGCTCGTA
CAGCGCTAGGACAACGACCATCTCGTTCTGATACTAATGCTGAACAAGCACCATTAACTCGCACTTCAACGCTAGTTCGACCATCCCAGCTTCCCAACTCCGTAGAGCAA
CCTACATGCTACTCGTACAGCATCAGTTAG
Protein sequenceShow/hide protein sequence
MAHHARSGGIGLAGGRSVQIPLSYAVCSYCSEPNFSGHVGLGVDHLKTVNHMEQPMSARTALGQRPSRSDTNAEQAPLTRTSTLVRPSQLPNSVEQPTCYSYSIS