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Carg28092 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28092
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGlyceraldehyde-3-phosphate dehydrogenase
Genome locationCarg_Chr15:613383..616305
RNA-Seq ExpressionCarg28092
SyntenyCarg28092
Gene Ontology termsGO:0006006 - glucose metabolic process (biological process)
GO:0009536 - plastid (cellular component)
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (molecular function)
GO:0050661 - NADP binding (molecular function)
GO:0051287 - NAD binding (molecular function)
InterPro domainsIPR020828 - Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
IPR020831 - Glyceraldehyde/Erythrose phosphate dehydrogenase family
IPR036291 - NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578391.1 Protoporphyrinogen oxidase 2, partial [Cucurbita argyrosperma subsp. sororia]1.6e-4768.71Show/hide
Query:  SSNHRDGLSCWKIYSLRMQAADL-----------------------------------GLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKT
        + NHRDGLS  K  +   +AADL                                   GLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKT
Subjt:  SSNHRDGLSCWKIYSLRMQAADL-----------------------------------GLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKT

Query:  LLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        LLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
Subjt:  LLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE

KAG6578399.1 Protoporphyrinogen oxidase 2, partial [Cucurbita argyrosperma subsp. sororia]1.6e-4768.71Show/hide
Query:  SSNHRDGLSCWKIYSLRMQAADL-----------------------------------GLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKT
        + NHRDGLS  K  +   +AADL                                   GLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKT
Subjt:  SSNHRDGLSCWKIYSLRMQAADL-----------------------------------GLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKT

Query:  LLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        LLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
Subjt:  LLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE

KAG7015971.1 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-85100Show/hide
Query:  GTLFSLHDVVQSRLQFKLMRDELKQIVTWISAQLLELKGSPLLSSNHRDGLSCWKIYSLRMQAADLGLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHD
        GTLFSLHDVVQSRLQFKLMRDELKQIVTWISAQLLELKGSPLLSSNHRDGLSCWKIYSLRMQAADLGLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHD
Subjt:  GTLFSLHDVVQSRLQFKLMRDELKQIVTWISAQLLELKGSPLLSSNHRDGLSCWKIYSLRMQAADLGLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHD

Query:  IKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        IKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
Subjt:  IKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE

XP_023551041.1 glyceraldehyde-3-phosphate dehydrogenase 1-like isoform X1 [Cucurbita pepo subsp. pepo]6.7e-4690.72Show/hide
Query:  LRMQAADLGLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        +++    +GLSNCWKNQ PASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
Subjt:  LRMQAADLGLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE

XP_023551048.1 glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like isoform X4 [Cucurbita pepo subsp. pepo]6.7e-4690.72Show/hide
Query:  LRMQAADLGLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        +++    +GLSNCWKNQ PASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
Subjt:  LRMQAADLGLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE

TrEMBL top hitse value%identityAlignment
A0A5P9VJ34 Glyceraldehyde-3-phosphate dehydrogenase7.0e-3394.44Show/hide
Query:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        TYMFKYD VHGQWKHHDIKVKDGKTLLFGEKAV VFGTRNPEEIPWGEAGAEYVVESTGVFTD+DKAAAHL+
Subjt:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE

A0A6J1FJL0 glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like1.4e-33100Show/hide
Query:  MFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        MFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
Subjt:  MFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE

A0A6J1JY24 glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like2.1e-3297.14Show/hide
Query:  MFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        MFKYD VHGQWKHHDIKVKDGKTLLFGEKAV VFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
Subjt:  MFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE

E5G6F3 Glyceraldehyde-3-phosphate dehydrogenase1.0e-3193.06Show/hide
Query:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        TYMFKYD VHGQWKHHDIKVKD KTLLFGEKAV VFG RNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHL+
Subjt:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE

E7CHF0 Glyceraldehyde-3-phosphate dehydrogenase (Fragment)1.0e-3193.06Show/hide
Query:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        TYMFKYD VHGQWKHHDIKVKD KTLLFGEKAV VFG RNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHL+
Subjt:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE

SwissProt top hitse value%identityAlignment
P26518 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic2.0e-3286.11Show/hide
Query:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        TYMFKYD VHGQWKHH++KVKD KTLLFGEK V VFG RNPEEIPWGE GAE+VVESTGVFTDKDKAAAHL+
Subjt:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE

P26520 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic1.2e-3281.82Show/hide
Query:  SIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        S+   TYMFKYD VHGQWKHH++K KD KTLLFGEK V VFG RNPEEIPWGEAGA+YVVESTGVFTDKDKAAAHL+
Subjt:  SIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE

P34921 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic8.9e-3388.89Show/hide
Query:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        TYMFKYD VHGQWKHHDIKVKD KTLLFGEKAV VFG RNPEEIPWG  GA+YVVESTGVFTDKDKAAAHL+
Subjt:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE

Q7FAH2 Glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic3.4e-3286.11Show/hide
Query:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        TYMFKYD VHGQWKHH++KVKD KTLLFGEK V VFG RNPEEIPWGE GAE+VVESTGVFTDKDKAAAHL+
Subjt:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE

Q9FX54 Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic5.7e-3284.72Show/hide
Query:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        TYMFKYD VHGQWKHH++KVKD KTLLFGEK V VFG RNPE+IPWGEAGA++VVESTGVFTDKDKAAAHL+
Subjt:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE

Arabidopsis top hitse value%identityAlignment
AT1G13440.1 glyceraldehyde-3-phosphate dehydrogenase C24.1e-3384.72Show/hide
Query:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        TYMFKYD VHGQWKHH++KVKD KTLLFGEK V VFG RNPE+IPWGEAGA++VVESTGVFTDKDKAAAHL+
Subjt:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE

AT1G13440.2 glyceraldehyde-3-phosphate dehydrogenase C24.1e-3384.72Show/hide
Query:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        TYMFKYD VHGQWKHH++KVKD KTLLFGEK V VFG RNPE+IPWGEAGA++VVESTGVFTDKDKAAAHL+
Subjt:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE

AT1G16300.1 glyceraldehyde-3-phosphate dehydrogenase of plastid 22.5e-1453.52Show/hide
Query:  YMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        YMFKYD  HG +K   I V D  TL    K V V   R+P EIPW + GAEYVVES+GVFT   +A++HL+
Subjt:  YMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE

AT1G79530.1 glyceraldehyde-3-phosphate dehydrogenase of plastid 13.3e-1453.52Show/hide
Query:  YMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        YM KYD  HG +K   I V D  TL    K V V   R+P EIPW + GA+YVVES+GVFT   KAA+HL+
Subjt:  YMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE

AT3G04120.1 glyceraldehyde-3-phosphate dehydrogenase C subunit 17.7e-3281.94Show/hide
Query:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE
        TYMFKYD VHGQWKH+++K+KD KTLLFGEK V VFG RNPE+IPW EAGA+YVVESTGVFTDKDKAAAHL+
Subjt:  TYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTACACTCTTTTCGCTCCATGATGTTGTCCAAAGTCGATTGCAATTCAAATTGATGAGGGATGAGCTGAAGCAAATTGTTACATGGATCTCAGCACAGTTGTTGGAGTT
GAAGGGGAGCCCACTTTTGTCAAGTAACCACAGGGATGGTTTGTCTTGTTGGAAAATCTATAGCCTCCGGATGCAAGCTGCTGATCTTGGACTCTCAAACTGTTGGAAGA
ATCAGCTTCCAGCATCCATTATCTGTCAAACCTACATGTTCAAATACGATGGTGTACACGGCCAGTGGAAGCACCACGATATTAAGGTTAAGGACGGCAAGACTCTTCTC
TTTGGAGAAAAAGCAGTCGCCGTTTTTGGTACTAGGAACCCGGAGGAGATCCCATGGGGAGAGGCTGGAGCTGAGTATGTGGTTGAATCCACTGGAGTTTTCACTGATAA
GGACAAGGCTGCTGCTCATTTGGAG
mRNA sequenceShow/hide mRNA sequence
GGTACACTCTTTTCGCTCCATGATGTTGTCCAAAGTCGATTGCAATTCAAATTGATGAGGGATGAGCTGAAGCAAATTGTTACATGGATCTCAGCACAGTTGTTGGAGTT
GAAGGGGAGCCCACTTTTGTCAAGTAACCACAGGGATGGTTTGTCTTGTTGGAAAATCTATAGCCTCCGGATGCAAGCTGCTGATCTTGGACTCTCAAACTGTTGGAAGA
ATCAGCTTCCAGCATCCATTATCTGTCAAACCTACATGTTCAAATACGATGGTGTACACGGCCAGTGGAAGCACCACGATATTAAGGTTAAGGACGGCAAGACTCTTCTC
TTTGGAGAAAAAGCAGTCGCCGTTTTTGGTACTAGGAACCCGGAGGAGATCCCATGGGGAGAGGCTGGAGCTGAGTATGTGGTTGAATCCACTGGAGTTTTCACTGATAA
GGACAAGGCTGCTGCTCATTTGGAG
Protein sequenceShow/hide protein sequence
GTLFSLHDVVQSRLQFKLMRDELKQIVTWISAQLLELKGSPLLSSNHRDGLSCWKIYSLRMQAADLGLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLL
FGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLE