; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg28114 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28114
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionoligouridylate binding protein 1B
Genome locationCarg_Chr14:9324851..9330209
RNA-Seq ExpressionCarg28114
SyntenyCarg28114
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018228.1 Oligouridylate-binding protein 1B [Cucurbita argyrosperma subsp. argyrosperma]5.9e-154100Show/hide
Query:  MPASEAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDR
        MPASEAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDR
Subjt:  MPASEAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDR

Query:  RSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLS
        RSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLS
Subjt:  RSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLS

Query:  GKWLGSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNYYCICGQSRPRGHST
        GKWLGSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNYYCICGQSRPRGHST
Subjt:  GKWLGSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNYYCICGQSRPRGHST

XP_022955787.1 oligouridylate-binding protein 1B-like isoform X1 [Cucurbita moschata]2.8e-11689.67Show/hide
Query:  SFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF
        + LQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF
Subjt:  SFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF

Query:  GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRVTGQQR
        GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARV  DQKTG  RGFGFVSFRNQQEAQSAINDLSGKWLGSKQIR     +
Subjt:  GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRVTGQQR

Query:  CWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY
             + KQSSDTK  VELSNGSSEDGKESVNNEAPE    Y
Subjt:  CWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY

XP_022980633.1 oligouridylate-binding protein 1B-like isoform X1 [Cucurbita maxima]1.1e-11589.26Show/hide
Query:  SFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF
        + LQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF
Subjt:  SFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF

Query:  GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRVTGQQR
        GQPIKVNWAYASSQREDTSGHFNIFVGDLS EVTDAMLFACFSAYSSCSDARV  DQKTG  RGFGFVSFRNQQEAQSAINDLSGKWLGSKQIR     +
Subjt:  GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRVTGQQR

Query:  CWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY
             + KQSSDTK  VELSNGSSEDGKESVNNEAPE    Y
Subjt:  CWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY

XP_022980635.1 oligouridylate-binding protein 1B-like isoform X3 [Cucurbita maxima]1.1e-11589.26Show/hide
Query:  SFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF
        + LQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF
Subjt:  SFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF

Query:  GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRVTGQQR
        GQPIKVNWAYASSQREDTSGHFNIFVGDLS EVTDAMLFACFSAYSSCSDARV  DQKTG  RGFGFVSFRNQQEAQSAINDLSGKWLGSKQIR     +
Subjt:  GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRVTGQQR

Query:  CWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY
             + KQSSDTK  VELSNGSSEDGKESVNNEAPE    Y
Subjt:  CWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY

XP_023527002.1 oligouridylate-binding protein 1B-like isoform X1 [Cucurbita pepo subsp. pepo]4.9e-11689.26Show/hide
Query:  SFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF
        + LQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF
Subjt:  SFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF

Query:  GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRVTGQQR
        GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARV  DQKTG  RGFGFVSFRNQQEAQSAINDLSGKWLGSKQIR     +
Subjt:  GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRVTGQQR

Query:  CWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY
             + KQSSDTK  VE+SNGSSEDGKESVNNEAPE    Y
Subjt:  CWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY

TrEMBL top hitse value%identityAlignment
A0A6J1GUK1 oligouridylate-binding protein 1B-like isoform X11.4e-11689.67Show/hide
Query:  SFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF
        + LQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF
Subjt:  SFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF

Query:  GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRVTGQQR
        GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARV  DQKTG  RGFGFVSFRNQQEAQSAINDLSGKWLGSKQIR     +
Subjt:  GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRVTGQQR

Query:  CWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY
             + KQSSDTK  VELSNGSSEDGKESVNNEAPE    Y
Subjt:  CWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY

A0A6J1GUZ4 oligouridylate-binding protein 1B-like isoform X29.9e-11589.26Show/hide
Query:  SFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF
        + LQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF
Subjt:  SFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF

Query:  GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRVTGQQR
        GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARV  DQKTG  RGFGFVSFRNQQEAQSAINDLSGKWLGSKQIR     +
Subjt:  GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRVTGQQR

Query:  CWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY
             + KQSSDTK  VELSNGSS DGKESVNNEAPE    Y
Subjt:  CWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY

A0A6J1IX01 oligouridylate-binding protein 1B-like isoform X35.2e-11689.26Show/hide
Query:  SFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF
        + LQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF
Subjt:  SFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF

Query:  GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRVTGQQR
        GQPIKVNWAYASSQREDTSGHFNIFVGDLS EVTDAMLFACFSAYSSCSDARV  DQKTG  RGFGFVSFRNQQEAQSAINDLSGKWLGSKQIR     +
Subjt:  GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRVTGQQR

Query:  CWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY
             + KQSSDTK  VELSNGSSEDGKESVNNEAPE    Y
Subjt:  CWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY

A0A6J1IZU2 oligouridylate-binding protein 1B-like isoform X23.8e-11488.84Show/hide
Query:  SFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF
        + LQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF
Subjt:  SFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF

Query:  GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRVTGQQR
        GQPIKVNWAYASSQREDTSGHFNIFVGDLS EVTDAMLFACFSAYSSCSDARV  DQKTG  RGFGFVSFRNQQEAQSAINDLSGKWLGSKQIR     +
Subjt:  GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRVTGQQR

Query:  CWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY
             + KQSSDTK  VELSNGSS DGKESVNNEAPE    Y
Subjt:  CWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY

A0A6J1IZV8 oligouridylate-binding protein 1B-like isoform X15.2e-11689.26Show/hide
Query:  SFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF
        + LQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF
Subjt:  SFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLF

Query:  GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRVTGQQR
        GQPIKVNWAYASSQREDTSGHFNIFVGDLS EVTDAMLFACFSAYSSCSDARV  DQKTG  RGFGFVSFRNQQEAQSAINDLSGKWLGSKQIR     +
Subjt:  GQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRVTGQQR

Query:  CWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY
             + KQSSDTK  VELSNGSSEDGKESVNNEAPE    Y
Subjt:  CWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY

SwissProt top hitse value%identityAlignment
Q6YZW2 RNA-binding protein 2082.9e-7961.24Show/hide
Query:  EQQPSFDAASSFLQQQSLYHPGLLAP------PQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDR
        +QQ         LQQQ  Y  G+LA        Q+EPI +GNLPPGFD STCRSVYVGN+H  VTE LL EVF S GLVE CKL+RKEKSS+GFV Y+DR
Subjt:  EQQPSFDAASSFLQQQSLYHPGLLAP------PQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDR

Query:  RSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLS
        RSAALAI++L+GRH+ GQ IKVNWAYAS+QREDTSGHF+IFVGDLS+EV DA L+ACFSAY SCSDARV  D KTG  RG+GFVSFRNQQEA++AI +++
Subjt:  RSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLS

Query:  GKWLGSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSS-----EDGKESVNNEAPE
        GKWLGS+QIR     +  +  + KQ +D    V L+NGSS     E  +++ + E PE
Subjt:  GKWLGSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSS-----EDGKESVNNEAPE

Q9LJH8 Oligouridylate-binding protein 1C1.2e-9870.08Show/hide
Query:  EAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAA
        + +QQ +     + +QQ SLYHPG+LAPPQ+EP+PSGNLPPGFD STCRSVYVGNIH QVTEPLLQE+F S G VE  KL+RK+KSSYGFVHYFDRRSAA
Subjt:  EAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAA

Query:  LAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWL
        LAILSLNGRHLFGQPIKVNWAYA+ QREDTS HFNIFVGDLS EVTDA L+  FS +SSCSDARV  DQKTG  RGFGFVSFRNQQ+AQ+AIN+++GKWL
Subjt:  LAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWL

Query:  GSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY
         S+QIR     +  +    K SSD K  VEL+ GSSEDGKE++N E PE    +
Subjt:  GSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY

Q9LQI9 Oligouridylate-binding protein 1B1.5e-10473.62Show/hide
Query:  EAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAA
        + +QQ       + +QQQSLYHPGLLAPPQIEPIPSGNLPPGFD STCRSVYVGNIH+QVTEPLLQEVF   G VE CKL+RKEKSSYGFVHYFDRRSA 
Subjt:  EAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAA

Query:  LAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWL
        LAILSLNGRHLFGQPIKVNWAYAS QREDTS HFNIFVGDLS EVTDAMLF CFS Y +CSDARV  DQKTG  RGFGFVSFRNQQ+AQ+AI++++GKWL
Subjt:  LAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWL

Query:  GSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY
        GS+QIR     +  +  + KQSSD+K  VEL++G SEDGK++ N EAPE    Y
Subjt:  GSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY

Q9M427 Oligouridylate-binding protein 11.9e-9973.52Show/hide
Query:  EQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALA
        +QQ         L QQSLYHPGLLAPPQIEPI SGNLPPGFD+STCRSVYVGNIH QVTEPLLQEVF S G +EGCKL+RK+KSSYGFV YFDRRSAALA
Subjt:  EQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALA

Query:  ILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGS
        I++LNGRHLFGQPIKVNWAYAS+QREDTS H+NIFVGDLS EVTDA LFACFS Y+SCSDARV  DQKTG  RGFGFVSFRNQQEAQSAINDL+GKWLGS
Subjt:  ILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGS

Query:  KQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKES-VNNEAPETTFNY
        +QIR     +    +  +Q+SD K  VEL++G+S+DG+E  VN +APE    Y
Subjt:  KQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKES-VNNEAPETTFNY

Q9SYG4 Oligouridylate-binding protein 1A4.6e-9366.27Show/hide
Query:  EAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAA
        + + Q +    +   Q  SLYHPG++APPQ+EP+PSGNLPPGFD +TCRSVY GNIH QVTE LLQE+F S G +E CKL+RK+KSSYGFVHYFDRR A+
Subjt:  EAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAA

Query:  LAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWL
        +AI++LNGRH+FGQP+KVNWAYA+ QREDTS HFNIFVGDLS EVTDA LF  FSA++SCSDARV  DQKTG  RGFGFVSFRNQQ+AQ+AIN+++GKW+
Subjt:  LAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWL

Query:  GSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPE
         S+QIR     +  +  + K SSD K  VEL+NGSSEDG+E  N +APE
Subjt:  GSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPE

Arabidopsis top hitse value%identityAlignment
AT1G17370.1 oligouridylate binding protein 1B1.1e-10573.62Show/hide
Query:  EAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAA
        + +QQ       + +QQQSLYHPGLLAPPQIEPIPSGNLPPGFD STCRSVYVGNIH+QVTEPLLQEVF   G VE CKL+RKEKSSYGFVHYFDRRSA 
Subjt:  EAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAA

Query:  LAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWL
        LAILSLNGRHLFGQPIKVNWAYAS QREDTS HFNIFVGDLS EVTDAMLF CFS Y +CSDARV  DQKTG  RGFGFVSFRNQQ+AQ+AI++++GKWL
Subjt:  LAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWL

Query:  GSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY
        GS+QIR     +  +  + KQSSD+K  VEL++G SEDGK++ N EAPE    Y
Subjt:  GSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY

AT1G17370.2 oligouridylate binding protein 1B2.3e-10372.83Show/hide
Query:  EAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAA
        + +QQ       + +QQQSLYHPGLLAPPQIEPIPSGNLPPGFD STCRSVYVGNIH+QVTEPLLQEVF   G VE CKL+RKEKSSYGFVHYFDRRSA 
Subjt:  EAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAA

Query:  LAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWL
        LAILSLNGRHLFGQPIKVNWAYAS QREDTS HFNIFVGDLS EVTDAMLF CFS Y +CSDARV  DQKTG  RGFGFVSFRNQQ+AQ+AI++++GKWL
Subjt:  LAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWL

Query:  GSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY
        GS+QIR     +  +  + KQSSD+K  VEL++G   DGK++ N EAPE    Y
Subjt:  GSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY

AT1G54080.1 oligouridylate-binding protein 1A3.3e-9466.27Show/hide
Query:  EAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAA
        + + Q +    +   Q  SLYHPG++APPQ+EP+PSGNLPPGFD +TCRSVY GNIH QVTE LLQE+F S G +E CKL+RK+KSSYGFVHYFDRR A+
Subjt:  EAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAA

Query:  LAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWL
        +AI++LNGRH+FGQP+KVNWAYA+ QREDTS HFNIFVGDLS EVTDA LF  FSA++SCSDARV  DQKTG  RGFGFVSFRNQQ+AQ+AIN+++GKW+
Subjt:  LAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWL

Query:  GSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPE
         S+QIR     +  +  + K SSD K  VEL+NGSSEDG+E  N +APE
Subjt:  GSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPE

AT1G54080.2 oligouridylate-binding protein 1A1.8e-9265.22Show/hide
Query:  EAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAA
        + + Q +    +   Q  SLYHPG++APPQ+EP+PSGNLPPGFD +TCRSVY GNIH QVTE LLQE+F S G +E CKL+RK+KSSYGFVHYFDRR A+
Subjt:  EAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAA

Query:  LAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCS----DARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLS
        +AI++LNGRH+FGQP+KVNWAYA+ QREDTS HFNIFVGDLS EVTDA LF  FSA++SCS    DARV  DQKTG  RGFGFVSFRNQQ+AQ+AIN+++
Subjt:  LAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCS----DARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLS

Query:  GKWLGSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPE
        GKW+ S+QIR     +  +  + K SSD K  VEL+NGSSEDG+E  N +APE
Subjt:  GKWLGSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPE

AT3G14100.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.9e-10070.08Show/hide
Query:  EAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAA
        + +QQ +     + +QQ SLYHPG+LAPPQ+EP+PSGNLPPGFD STCRSVYVGNIH QVTEPLLQE+F S G VE  KL+RK+KSSYGFVHYFDRRSAA
Subjt:  EAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAA

Query:  LAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWL
        LAILSLNGRHLFGQPIKVNWAYA+ QREDTS HFNIFVGDLS EVTDA L+  FS +SSCSDARV  DQKTG  RGFGFVSFRNQQ+AQ+AIN+++GKWL
Subjt:  LAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWL

Query:  GSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY
         S+QIR     +  +    K SSD K  VEL+ GSSEDGKE++N E PE    +
Subjt:  GSKQIRVTGQQRCWSEMKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGCATCAGAGGCTGAGCAGCAGCCAAGCTTTGATGCAGCAAGCTCTTTTCTTCAGCAGCAGTCTCTCTATCACCCTGGCCTCCTAGCTCCTCCGCAGATTGAGCC
AATTCCTAGCGGAAATCTACCTCCTGGTTTTGATGCAAGCACTTGCCGCAGTGTATATGTTGGAAACATCCACGTACAAGTTACAGAACCACTTCTTCAAGAGGTTTTTG
GTAGTATTGGTCTCGTTGAAGGTTGTAAGCTTGTAAGGAAGGAGAAGTCATCCTATGGCTTTGTCCACTACTTCGATCGTAGGTCAGCTGCCCTGGCTATTTTGTCACTC
AATGGGAGGCATTTATTTGGGCAGCCTATCAAAGTTAACTGGGCATATGCTAGTAGCCAGAGGGAGGACACATCGGGTCATTTCAACATTTTTGTTGGCGATCTTAGCGC
TGAAGTCACTGATGCTATGTTGTTTGCATGCTTTTCTGCTTACTCCAGTTGCTCAGATGCAAGAGTTTATGTGGATCAAAAGACTGGGGCGCTCAGAGGGTTTGGATTTG
TTTCCTTCCGAAACCAGCAGGAAGCTCAAAGTGCAATAAATGACTTATCTGGTAAGTGGCTTGGGAGTAAACAGATACGTGTAACTGGGCAGCAAAGGTGCTGGAGTGAA
ATGAAGATAAAACAGAGCTCAGATACCAAAGTGTGGGTAGAACTATCAAATGGCTCATCTGAAGATGGTAAAGAGTCTGTAAATAATGAGGCTCCGGAGACAACCTTCAA
TTACTACTGTATATGTGGGCAATCTCGCCCCAGAGGTCACTCAACTTGA
mRNA sequenceShow/hide mRNA sequence
TAACTTCCTCAAGCTCTCTCTCTTCCCCGTTTTGGAGGTCGTTGACACGATCTTCGTTCCAGACCAGTGCCCTAATCTTTCGCTTTGTCGGAAAATTAGACTTACTGCAA
TTTAAGAGCATAAATCCGAGCGGGCAGAAACCAAAAAAATGCCAGCATCAGAGGCTGAGCAGCAGCCAAGCTTTGATGCAGCAAGCTCTTTTCTTCAGCAGCAGTCTCTC
TATCACCCTGGCCTCCTAGCTCCTCCGCAGATTGAGCCAATTCCTAGCGGAAATCTACCTCCTGGTTTTGATGCAAGCACTTGCCGCAGTGTATATGTTGGAAACATCCA
CGTACAAGTTACAGAACCACTTCTTCAAGAGGTTTTTGGTAGTATTGGTCTCGTTGAAGGTTGTAAGCTTGTAAGGAAGGAGAAGTCATCCTATGGCTTTGTCCACTACT
TCGATCGTAGGTCAGCTGCCCTGGCTATTTTGTCACTCAATGGGAGGCATTTATTTGGGCAGCCTATCAAAGTTAACTGGGCATATGCTAGTAGCCAGAGGGAGGACACA
TCGGGTCATTTCAACATTTTTGTTGGCGATCTTAGCGCTGAAGTCACTGATGCTATGTTGTTTGCATGCTTTTCTGCTTACTCCAGTTGCTCAGATGCAAGAGTTTATGT
GGATCAAAAGACTGGGGCGCTCAGAGGGTTTGGATTTGTTTCCTTCCGAAACCAGCAGGAAGCTCAAAGTGCAATAAATGACTTATCTGGTAAGTGGCTTGGGAGTAAAC
AGATACGTGTAACTGGGCAGCAAAGGTGCTGGAGTGAAATGAAGATAAAACAGAGCTCAGATACCAAAGTGTGGGTAGAACTATCAAATGGCTCATCTGAAGATGGTAAA
GAGTCTGTAAATAATGAGGCTCCGGAGACAACCTTCAATTACTACTGTATATGTGGGCAATCTCGCCCCAGAGGTCACTCAACTTGATCTACATCGCCATTTTCATTCTC
TTGGTGCTGGGGTCATTGAGGAAGTTCGAACTCACGGGATAAAGGATTTGTTTTTGTGAGCGTTAATACTCATGCTGAGGCAGCTCTGGCAATTCAAATGGGAAATACTC
GTCTTTTCTCTGTGGAAGACAAAATAAAGGTATTGTTCTGCTTTATATGGTGAAGCTACTCTCTTACTGCTAAATGTTATATTGTCCATATTCCATAATGGTCTGAACTG
ATGTATTATGCCACCTGGAAATAAATTGAAGGTGCATAAGTCTTGAAATTGGACAGATTGGCTCCGTTTTGGGTGCATAGTCACTTCCTTTTCTTTACAATTTCATATAC
GTAAATGCATCCTCATCCACTGATGGAGAAAAGTTAAAAGTTTACTCTCAATGGTCAATTAAGCGTCAATTGCTCTCGTTTATTTCAACTTGCAACTGTCGAATTCCAAG
TT
Protein sequenceShow/hide protein sequence
MPASEAEQQPSFDAASSFLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSL
NGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVYVDQKTGALRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRVTGQQRCWSE
MKIKQSSDTKVWVELSNGSSEDGKESVNNEAPETTFNYYCICGQSRPRGHST