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Carg28115 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28115
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr20:14021..16758
RNA-Seq ExpressionCarg28115
SyntenyCarg28115
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010204.1 hypothetical protein SDJN02_26996, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-107100Show/hide
Query:  MMLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGALLINLVIALNVSSKQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYME
        MMLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGALLINLVIALNVSSKQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYME
Subjt:  MMLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGALLINLVIALNVSSKQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYME

Query:  TPVPREADYDLRNIRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSC
        TPVPREADYDLRNIRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSC
Subjt:  TPVPREADYDLRNIRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSC

Query:  R
        R
Subjt:  R

XP_004149633.1 uncharacterized protein LOC101215314 isoform X1 [Cucumis sativus]2.2e-7369.36Show/hide
Query:  MLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGA-----LLINLVIAL----------------------------------------NVSS
        MLCNSLRDRLRPWLRDY RLQSFA+ILIYIQIGCALIGSLGA     LLINL IAL                                        N+SS
Subjt:  MLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGA-----LLINLVIAL----------------------------------------NVSS

Query:  KQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKC
        KQYGPLFTFSVK TLAMQ IGF+VRLSSSLLWIQIYR GISYMET VPREADYDLRN          +RQPSGSDDMIGGSIYDPT  SS+FEDG DSKC
Subjt:  KQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKC

Query:  LSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADND
        LSGISHFGNGDN STSGPDVSRSKLSRHFQVAD++
Subjt:  LSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADND

XP_011653507.1 uncharacterized protein LOC101215314 isoform X2 [Cucumis sativus]3.8e-7369.66Show/hide
Query:  MLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGA-----LLINLVIAL----------------------------------------NVSS
        MLCNSLRDRLRPWLRDY RLQSFA+ILIYIQIGCALIGSLGA     LLINL IAL                                        N+SS
Subjt:  MLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGA-----LLINLVIAL----------------------------------------NVSS

Query:  KQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKC
        KQYGPLFTFSVK TLAMQ IGF+VRLSSSLLWIQIYR GISYMET VPREADYDLRN          +RQPSGSDDMIGGSIYDPT  SS+FEDG DSKC
Subjt:  KQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKC

Query:  LSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADN
        LSGISHFGNGDN STSGPDVSRSKLSRHFQVAD+
Subjt:  LSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADN

XP_022944299.1 uncharacterized protein LOC111448786 isoform X1 [Cucurbita moschata]3.1e-7590.85Show/hide
Query:  LVIALNVSSKQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSV
        L I  NVSSKQYGPLFTFSVK TLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN          +RQPSGSDDMIGGSIYDPTSCSSV
Subjt:  LVIALNVSSKQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSV

Query:  FEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCR
        FEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCR
Subjt:  FEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCR

XP_022944300.1 uncharacterized protein LOC111448786 isoform X2 [Cucurbita moschata]2.4e-7591.36Show/hide
Query:  IALNVSSKQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSVFE
        I+ NVSSKQYGPLFTFSVK TLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN          +RQPSGSDDMIGGSIYDPTSCSSVFE
Subjt:  IALNVSSKQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSVFE

Query:  DGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCR
        DGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCR
Subjt:  DGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCR

TrEMBL top hitse value%identityAlignment
A0A0A0KWY7 Uncharacterized protein1.1e-7369.36Show/hide
Query:  MLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGA-----LLINLVIAL----------------------------------------NVSS
        MLCNSLRDRLRPWLRDY RLQSFA+ILIYIQIGCALIGSLGA     LLINL IAL                                        N+SS
Subjt:  MLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGA-----LLINLVIAL----------------------------------------NVSS

Query:  KQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKC
        KQYGPLFTFSVK TLAMQ IGF+VRLSSSLLWIQIYR GISYMET VPREADYDLRN          +RQPSGSDDMIGGSIYDPT  SS+FEDG DSKC
Subjt:  KQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKC

Query:  LSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADND
        LSGISHFGNGDN STSGPDVSRSKLSRHFQVAD++
Subjt:  LSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADND

A0A1S3BP27 uncharacterized protein LOC103491645 isoform X24.5e-7268.94Show/hide
Query:  MLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGA-----LLINLVIAL----------------------------------------NVSS
        MLCNSLRDRLRP LRDY RLQSFA+ILIYIQIGCALIGSLGA     LLINL IAL                                        N+SS
Subjt:  MLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGA-----LLINLVIAL----------------------------------------NVSS

Query:  KQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKC
        +QYGPLFTFSVK TLAMQ IGF+VRLSSSLLWIQIYR GISYMET VPREADYDLRN          +RQPSGSDDMIGGSIYDPT  SS+FEDG DSKC
Subjt:  KQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKC

Query:  LSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADND
        LSGISHFGNGDN STSGPDVSRSKLSRHFQVAD D
Subjt:  LSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADND

A0A1S4DXR6 uncharacterized protein LOC103491645 isoform X31.5e-7271.88Show/hide
Query:  MLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGA-----LLINLVIAL-------------------------------NVSSKQYGPLFTF
        MLCNSLRDRLRP LRDY RLQSFA+ILIYIQIGCALIGSLGA     LLINL IAL                               N+SS+QYGPLFTF
Subjt:  MLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGA-----LLINLVIAL-------------------------------NVSSKQYGPLFTF

Query:  SVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGN
        SVK TLAMQ IGF+VRLSSSLLWIQIYR GISYMET VPREADYDLRN          +RQPSGSDDMIGGSIYDPT  SS+FEDG DSKCLSGISHFGN
Subjt:  SVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGN

Query:  GDNSSTSGPDVSRSKLSRHFQVAD
        GDN STSGPDVSRSKLSRHFQVAD
Subjt:  GDNSSTSGPDVSRSKLSRHFQVAD

A0A6J1FWG5 uncharacterized protein LOC111448786 isoform X11.5e-7590.85Show/hide
Query:  LVIALNVSSKQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSV
        L I  NVSSKQYGPLFTFSVK TLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN          +RQPSGSDDMIGGSIYDPTSCSSV
Subjt:  LVIALNVSSKQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSV

Query:  FEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCR
        FEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCR
Subjt:  FEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCR

A0A6J1FYK8 uncharacterized protein LOC111448786 isoform X21.1e-7591.36Show/hide
Query:  IALNVSSKQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSVFE
        I+ NVSSKQYGPLFTFSVK TLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN          +RQPSGSDDMIGGSIYDPTSCSSVFE
Subjt:  IALNVSSKQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSVFE

Query:  DGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCR
        DGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCR
Subjt:  DGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55535.1 unknown protein4.5e-4044.74Show/hide
Query:  MMLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGA-----LLINLVIAL----------------------------------------NVS
        MMLC SLRDR+ PWLRDYV+LQS A+ LIY QIGCALIGSLGA     LLINL IAL                                        ++S
Subjt:  MMLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGA-----LLINLVIAL----------------------------------------NVS

Query:  SKQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSVFEDGH---
        ++ YG  F FSVK T+AM+ IGF VRLSSSLLW QIYR G + ++T +PRE D DLRN           RQ SG+++++GGSIYDP   +S+FE+     
Subjt:  SKQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSVFEDGH---

Query:  DSKCLSGISHFGNGDNSSTSGPDVSRSK
        +S   + ++H+  G+N S S  + S  K
Subjt:  DSKCLSGISHFGNGDNSSTSGPDVSRSK

AT1G55535.2 unknown protein4.5e-4044.74Show/hide
Query:  MMLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGA-----LLINLVIAL----------------------------------------NVS
        MMLC SLRDR+ PWLRDYV+LQS A+ LIY QIGCALIGSLGA     LLINL IAL                                        ++S
Subjt:  MMLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGA-----LLINLVIAL----------------------------------------NVS

Query:  SKQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSVFEDGH---
        ++ YG  F FSVK T+AM+ IGF VRLSSSLLW QIYR G + ++T +PRE D DLRN           RQ SG+++++GGSIYDP   +S+FE+     
Subjt:  SKQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------IRQPSGSDDMIGGSIYDPTSCSSVFEDGH---

Query:  DSKCLSGISHFGNGDNSSTSGPDVSRSK
        +S   + ++H+  G+N S S  + S  K
Subjt:  DSKCLSGISHFGNGDNSSTSGPDVSRSK

AT3G13420.1 unknown protein4.6e-2941.31Show/hide
Query:  MLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGAL-----LINLVIAL----------------------------------------NVSS
        MLC SLR+R+  WLRDYVRLQS  LILIY QIGCALIGSLGAL     LINL IAL                                        N+SS
Subjt:  MLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGAL-----LINLVIAL----------------------------------------NVSS

Query:  KQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------------------------IRQPSGSDDMIGGSI
          Y   + FSVK TLAM+  GF VRLSSSLLW QIYR G S +++P PR++D DLRN                             +Q S SD+++  SI
Subjt:  KQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRN----------------------------IRQPSGSDDMIGGSI

Query:  YDPTSCSSVFEDG
         +P S + + + G
Subjt:  YDPTSCSSVFEDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTTTGCAATTCATTGAGAGATCGACTTCGGCCATGGCTTCGTGATTATGTTAGGCTTCAGTCTTTCGCACTCATTCTCATTTATATCCAGATCGGGTGCGCATT
GATTGGATCCCTAGGGGCATTGCTTATAAATTTGGTGATCGCATTGAACGTTTCATCCAAGCAATATGGACCCCTTTTTACCTTTTCAGTGAAGCATACTCTGGCTATGC
AAAATATTGGTTTTGCTGTTAGACTATCGTCTTCACTACTGTGGATTCAAATTTACAGATCGGGGATTTCATATATGGAAACTCCAGTTCCCCGAGAGGCAGATTATGAT
TTGAGAAATATTAGACAACCCTCAGGTTCTGATGATATGATAGGGGGCTCTATCTATGATCCAACTTCTTGCTCGTCCGTATTCGAAGATGGTCATGATAGTAAATGTTT
GTCTGGGATCTCCCATTTCGGTAATGGTGATAATAGTTCTACTTCTGGGCCAGATGTATCTCGATCAAAGCTGTCCAGACATTTCCAAGTAGCTGATAATGATGGAACAA
ACTTGGCTGGTGATAAGGCTTTGATCTTTACGCATGATCTCACATCCTGTCGC
mRNA sequenceShow/hide mRNA sequence
CTTCCCATTTCAAAGAAAACCATATGATGCTTTGCAATTCATTGAGAGATCGACTTCGGCCATGGCTTCGTGATTATGTTAGGCTTCAGTCTTTCGCACTCATTCTCATT
TATATCCAGATCGGGTGCGCATTGATTGGATCCCTAGGGGCATTGCTTATAAATTTGGTGATCGCATTGAACGTTTCATCCAAGCAATATGGACCCCTTTTTACCTTTTC
AGTGAAGCATACTCTGGCTATGCAAAATATTGGTTTTGCTGTTAGACTATCGTCTTCACTACTGTGGATTCAAATTTACAGATCGGGGATTTCATATATGGAAACTCCAG
TTCCCCGAGAGGCAGATTATGATTTGAGAAATATTAGACAACCCTCAGGTTCTGATGATATGATAGGGGGCTCTATCTATGATCCAACTTCTTGCTCGTCCGTATTCGAA
GATGGTCATGATAGTAAATGTTTGTCTGGGATCTCCCATTTCGGTAATGGTGATAATAGTTCTACTTCTGGGCCAGATGTATCTCGATCAAAGCTGTCCAGACATTTCCA
AGTAGCTGATAATGATGGAACAAACTTGGCTGGTGATAAGGCTTTGATCTTTACGCATGATCTCACATCCTGTCGC
Protein sequenceShow/hide protein sequence
MMLCNSLRDRLRPWLRDYVRLQSFALILIYIQIGCALIGSLGALLINLVIALNVSSKQYGPLFTFSVKHTLAMQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYD
LRNIRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCR