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Carg28127 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28127
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPPM-type phosphatase domain-containing protein
Genome locationCarg_Chr01:6707108..6707795
RNA-Seq ExpressionCarg28127
SyntenyCarg28127
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607600.1 hypothetical protein SDJN03_00942, partial [Cucurbita argyrosperma subsp. sororia]2.1e-6199.13Show/hide
Query:  SGNLRVGDWWRYINMSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRD
        +GNLRVGDWWRYINMSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRD
Subjt:  SGNLRVGDWWRYINMSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRD

Query:  LVRDWNFDEVVVVQH
        LVRDWNFDEVVVVQH
Subjt:  LVRDWNFDEVVVVQH

KAG7037221.1 hypothetical protein SDJN02_00844, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-71100Show/hide
Query:  MYGTMTSFVYDLLRGSGNLRVGDWWRYINMSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRM
        MYGTMTSFVYDLLRGSGNLRVGDWWRYINMSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRM
Subjt:  MYGTMTSFVYDLLRGSGNLRVGDWWRYINMSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRM

Query:  DGNPRLVRSRAVRRDLVRDWNFDEVVVVQH
        DGNPRLVRSRAVRRDLVRDWNFDEVVVVQH
Subjt:  DGNPRLVRSRAVRRDLVRDWNFDEVVVVQH

XP_022932115.1 uncharacterized protein LOC111438425 [Cucurbita moschata]2.2e-5098.02Show/hide
Query:  MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRDLVRDWNFDEVVVVQ
        MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYA SAKVTPHPNIVISDRMDGNP LVRSRAVRRDLVRDWNFDEVVVVQ
Subjt:  MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRDLVRDWNFDEVVVVQ

Query:  H
        H
Subjt:  H

XP_022972939.1 uncharacterized protein LOC111471444 [Cucurbita maxima]3.9e-4793.07Show/hide
Query:  MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRDLVRDWNFDEVVVVQ
        MSL CLVCNSVESPSHS RSYSVSSSDNEGRC+SMANCLIWRPSFPPTHHPSYA SAKVTPHPNIVISDRMDG PRLVRSRAVRRDLVRDWNFD VVVV+
Subjt:  MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRDLVRDWNFDEVVVVQ

Query:  H
        H
Subjt:  H

XP_023522659.1 uncharacterized protein LOC111786655 [Cucurbita pepo subsp. pepo]4.5e-5199.01Show/hide
Query:  MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRDLVRDWNFDEVVVVQ
        MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYA SAKVTPHPNIVISDRMDGNPRLVRSRAVRRDLVRDWNFDEVVVVQ
Subjt:  MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRDLVRDWNFDEVVVVQ

Query:  H
        H
Subjt:  H

TrEMBL top hitse value%identityAlignment
A0A0A0K7X5 Uncharacterized protein2.3e-4590.1Show/hide
Query:  MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRDLVRDWNFDEVVVVQ
        MSLACLVCNSVESPSHSFRSYSVSSSDNEGRC++MANCLIWRPSFPPTHHPSYA SAKVTP P +  SD MDG PRLVRSRAVRRDLVRDWNFDEVVVVQ
Subjt:  MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRDLVRDWNFDEVVVVQ

Query:  H
        H
Subjt:  H

A0A1S4E3A0 uncharacterized protein LOC1035000458.8e-4589.11Show/hide
Query:  MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRDLVRDWNFDEVVVVQ
        MSLACLVCNSVESPSHSFRSYSVSSSDNEGRC++MANCLIWRPSFPPTHHPSYA SAKVTP P I  S+ MDG PRLVRSRAV+RDLVRDWNFDEVVVVQ
Subjt:  MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRDLVRDWNFDEVVVVQ

Query:  H
        H
Subjt:  H

A0A6J1C1C6 uncharacterized protein LOC1110074771.4e-4285.29Show/hide
Query:  MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPT-HHPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRDLVRDWNFDEVVVV
        MSLAC+VCNSVESPSHSFRSYSVSSSDNEGRC++MANCL+WRPSFPPT HHPSYA SAKVTP P I  S+ +DG PRLVRSRAVRRDLVRDWNFDEV VV
Subjt:  MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPT-HHPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRDLVRDWNFDEVVVV

Query:  QH
        QH
Subjt:  QH

A0A6J1F1B0 uncharacterized protein LOC1114384251.1e-5098.02Show/hide
Query:  MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRDLVRDWNFDEVVVVQ
        MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYA SAKVTPHPNIVISDRMDGNP LVRSRAVRRDLVRDWNFDEVVVVQ
Subjt:  MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRDLVRDWNFDEVVVVQ

Query:  H
        H
Subjt:  H

A0A6J1ID21 uncharacterized protein LOC1114714441.9e-4793.07Show/hide
Query:  MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRDLVRDWNFDEVVVVQ
        MSL CLVCNSVESPSHS RSYSVSSSDNEGRC+SMANCLIWRPSFPPTHHPSYA SAKVTPHPNIVISDRMDG PRLVRSRAVRRDLVRDWNFD VVVV+
Subjt:  MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRDLVRDWNFDEVVVVQ

Query:  H
        H
Subjt:  H

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G71865.1 unknown protein4.8e-2762.89Show/hide
Query:  MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTH-HPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRDLVRDWNFDEV
        MS ACLVC+SVESPSHSFRSYSVSSSDNEGRC+ +A+CL  +        +P  A S+KVTP PN    +    +PRLVRSRAVRRD+VRDWNF+E+
Subjt:  MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTH-HPSYAESAKVTPHPNIVISDRMDGNPRLVRSRAVRRDLVRDWNFDEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGGAACAATGACGAGCTTCGTTTACGATTTGCTTCGTGGTTCTGGGAACTTGAGAGTAGGAGATTGGTGGAGGTATATAAATATGAGCCTGGCATGTCTTGTATG
CAATAGTGTAGAGAGCCCTTCACACTCTTTTCGGAGCTATTCAGTTTCGAGTTCAGACAACGAGGGAAGATGTAACTCGATGGCTAACTGTCTAATTTGGAGACCATCTT
TCCCTCCAACACACCACCCATCATATGCAGAATCAGCCAAGGTAACTCCCCATCCAAACATTGTGATCAGTGACAGAATGGATGGTAACCCAAGGCTGGTGCGGAGCCGA
GCAGTAAGAAGGGACCTGGTACGGGACTGGAACTTCGACGAGGTGGTTGTAGTTCAGCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATGGAACAATGACGAGCTTCGTTTACGATTTGCTTCGTGGTTCTGGGAACTTGAGAGTAGGAGATTGGTGGAGGTATATAAATATGAGCCTGGCATGTCTTGTATG
CAATAGTGTAGAGAGCCCTTCACACTCTTTTCGGAGCTATTCAGTTTCGAGTTCAGACAACGAGGGAAGATGTAACTCGATGGCTAACTGTCTAATTTGGAGACCATCTT
TCCCTCCAACACACCACCCATCATATGCAGAATCAGCCAAGGTAACTCCCCATCCAAACATTGTGATCAGTGACAGAATGGATGGTAACCCAAGGCTGGTGCGGAGCCGA
GCAGTAAGAAGGGACCTGGTACGGGACTGGAACTTCGACGAGGTGGTTGTAGTTCAGCATTAGTAAGTTTGATGAGAGTAGTAGGGTTTTGAAATGGGTGGTTATGGCCT
GCAAAGATGGGGCTTCCTATGTACTTATGTTTTCTTGTGGTTACAACTGAACTCACACTTCCATTGGAAGAGTTTGCACATTTGTAAGCACCAGAAAATGGGATTTAGAA
CTT
Protein sequenceShow/hide protein sequence
MYGTMTSFVYDLLRGSGNLRVGDWWRYINMSLACLVCNSVESPSHSFRSYSVSSSDNEGRCNSMANCLIWRPSFPPTHHPSYAESAKVTPHPNIVISDRMDGNPRLVRSR
AVRRDLVRDWNFDEVVVVQH