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Carg28129 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28129
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTranslocase subunit seca
Genome locationCarg_Chr04:15158225..15159592
RNA-Seq ExpressionCarg28129
SyntenyCarg28129
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601783.1 hypothetical protein SDJN03_07016, partial [Cucurbita argyrosperma subsp. sororia]2.5e-9499.42Show/hide
Query:  MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
        MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSS TQLASSPPYLCGTPPSRVAN
Subjt:  MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN

Query:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

KAG7032498.1 hypothetical protein SDJN02_06547 [Cucurbita argyrosperma subsp. argyrosperma]5.1e-95100Show/hide
Query:  MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
        MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
Subjt:  MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN

Query:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

XP_022923501.1 uncharacterized protein LOC111431174 [Cucurbita moschata]7.4e-9498.84Show/hide
Query:  MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
        MNQVAVQRNVFSVREEM RAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLF KGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
Subjt:  MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN

Query:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

XP_022971782.1 uncharacterized protein LOC111470460 [Cucurbita maxima]1.1e-9297.11Show/hide
Query:  MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
        MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLIN T NDNPFRHRFDS+AANDALDLLF KGGCDLENF SSSTQLASSPPYLCGTPPSRVAN
Subjt:  MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN

Query:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

XP_023538993.1 uncharacterized protein LOC111799757 [Cucurbita pepo subsp. pepo]1.4e-9297.69Show/hide
Query:  MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
        MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLF K GCDLENFNS+STQLASSPPYLCGTPPSRVAN
Subjt:  MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN

Query:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        PLIQDARFG EKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

TrEMBL top hitse value%identityAlignment
A0A0A0KRF1 Uncharacterized protein7.8e-6581.01Show/hide
Query:  EMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKM
        E M+ A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DALDLLFLKGGC LENFNSS+ QLASSPPY CG+PPSRVANPLIQDARFG+EKPK+
Subjt:  EMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKM

Query:  LPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        LP+FSP  A PP SPPPS  R GG VR NFG  PAVRIEGFDCRLDRERRNRSIPALA
Subjt:  LPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

A0A1S3CR46 uncharacterized protein LOC1035033855.1e-6480.38Show/hide
Query:  EMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKM
        E MR+A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DA+DLLFLKGGC LE FNSS+TQLASS PY CG+PPSRVANPLIQDARFG+EKPK+
Subjt:  EMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKM

Query:  LPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        LP+FS   A PP SPPPS  R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Subjt:  LPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

A0A5D3C147 Uncharacterized protein8.6e-6480.77Show/hide
Query:  MRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLP
        MR+A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DA+DLLFLKGGC LE FNSS+TQLASS PY CG+PPSRVANPLIQDARFG+EKPK+LP
Subjt:  MRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLP

Query:  VFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        +FS   A PP SPPPS  R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Subjt:  VFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

A0A6J1E6Z2 uncharacterized protein LOC1114311743.6e-9498.84Show/hide
Query:  MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
        MNQVAVQRNVFSVREEM RAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLF KGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
Subjt:  MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN

Query:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

A0A6J1I2X1 uncharacterized protein LOC1114704605.2e-9397.11Show/hide
Query:  MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
        MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLIN T NDNPFRHRFDS+AANDALDLLF KGGCDLENF SSSTQLASSPPYLCGTPPSRVAN
Subjt:  MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN

Query:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13390.1 unknown protein1.2e-2240Show/hide
Query:  MNQVAVQRNVFSVREEMMR-AADTDRRERLVCPKPRRLGLINTTVNDN---PFRHRF---DSVAANDALDLLFLKGGCDLENFNSSSTQLASSPP-YLCG
        MN   +Q+N F   EEM R AA +DRR+ ++CPKPRR+G +N   + +      H+    +S + ++ LD +  KGG          T+   +PP +  G
Subjt:  MNQVAVQRNVFSVREEMMR-AADTDRRERLVCPKPRRLGLINTTVNDN---PFRHRF---DSVAANDALDLLFLKGGCDLENFNSSSTQLASSPP-YLCG

Query:  TPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYS--PPPSTDRNGGWV--RPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        +PPSRV+NPL +D+ F  E   +L V SP  + P  +   PPS+ RNG  V    +FGN P VR+ GFDC  DR   NRSI  LA
Subjt:  TPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYS--PPPSTDRNGGWV--RPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

AT1G13390.2 unknown protein1.2e-2240Show/hide
Query:  MNQVAVQRNVFSVREEMMR-AADTDRRERLVCPKPRRLGLINTTVNDN---PFRHRF---DSVAANDALDLLFLKGGCDLENFNSSSTQLASSPP-YLCG
        MN   +Q+N F   EEM R AA +DRR+ ++CPKPRR+G +N   + +      H+    +S + ++ LD +  KGG          T+   +PP +  G
Subjt:  MNQVAVQRNVFSVREEMMR-AADTDRRERLVCPKPRRLGLINTTVNDN---PFRHRF---DSVAANDALDLLFLKGGCDLENFNSSSTQLASSPP-YLCG

Query:  TPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYS--PPPSTDRNGGWV--RPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        +PPSRV+NPL +D+ F  E   +L V SP  + P  +   PPS+ RNG  V    +FGN P VR+ GFDC  DR   NRSI  LA
Subjt:  TPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYS--PPPSTDRNGGWV--RPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

AT1G68490.1 unknown protein9.5e-3146.28Show/hide
Query:  MNQVAVQRNVFS----VREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNP-----FRHRF---DSVAANDALDLLFLKGGCDLENFNSSSTQLASSP-
        MN  AVQ N F+    +R   +   + D +  +VCPKPRR+GL N   + +      F H+    +S A  D LD++  K G   E  N    Q+  SP 
Subjt:  MNQVAVQRNVFS----VREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNP-----FRHRF---DSVAANDALDLLFLKGGCDLENFNSSSTQLASSP-

Query:  PYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVA-PPPYSPPPSTDRNGGW-VRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        P+LCG+PPSRVANPL QDARF +E   +  V  P++  PP  SP  S+ R GG  VR NFGN P VR+EGFDC LDR+ RN SIPALA
Subjt:  PYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVA-PPPYSPPPSTDRNGGW-VRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

AT3G02555.1 unknown protein4.7e-2242.37Show/hide
Query:  MNQVAVQRNVFSVREEMMRAAD--TDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCD-LENFNSSSTQLASSPPYLCGTPPSR
        MN  ++Q+N F  REE        +   + +VCPKPRR    N  +   PFR  F    A+D  D    K G D L+ F    +  + SPP+  G+PPSR
Subjt:  MNQVAVQRNVFSVREEMMRAAD--TDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCD-LENFNSSSTQLASSPPYLCGTPPSR

Query:  VANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPA-VRIEGFDCRLDRERRNRSIPALA
         ANPL QDARFG+EK   L   SP ++P     P ++    G  R  FG  PA VR+EGFDC L+R+R N SIPA+A
Subjt:  VANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPA-VRIEGFDCRLDRERRNRSIPALA

AT5G16110.1 unknown protein2.6e-2844.92Show/hide
Query:  MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDL-------ENFNSSSTQLASSPPYLCGT
        MN   +Q+N F  REEMM     DR++ +VCPKPRR+GL+   V   P R      AA    DL   K G +L       E+  +    L+SSPPY  G+
Subjt:  MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDL-------ENFNSSSTQLASSPPYLCGT

Query:  PPSRVANPLIQDARFGNEKPKMLPVFSPEVAP------PPYSPPPSTDRNGGWVRPNFG-NIPAVRIEGFDCRLDRERRNRSIPALA
        PPSR ANPL QDARF +EK   +   SP + P      P  S   S+  + G VR  FG N PAVR+EGFDC L+R+R+N SIPA+A
Subjt:  PPSRVANPLIQDARFGNEKPKMLPVFSPEVAP------PPYSPPPSTDRNGGWVRPNFG-NIPAVRIEGFDCRLDRERRNRSIPALA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAGGTGGCGGTTCAACGGAACGTGTTTTCAGTGCGTGAAGAGATGATGAGAGCTGCAGACACCGACCGCCGTGAACGACTGGTTTGCCCAAAGCCTCGCCGTCT
CGGACTCATTAACACCACCGTCAACGACAACCCATTTAGACATCGTTTTGATTCCGTAGCTGCTAATGATGCTTTGGATCTTCTCTTCTTGAAGGGAGGTTGTGATTTGG
AGAATTTTAACAGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTATTTATGTGGGACGCCGCCCAGCAGAGTAGCTAACCCATTAATCCAAGACGCTAGATTTGGGAAC
GAGAAGCCAAAGATGCTCCCCGTGTTCTCGCCGGAAGTGGCTCCTCCTCCGTATTCGCCGCCACCATCAACCGATCGGAATGGCGGCTGGGTTCGACCAAACTTCGGAAA
CATCCCAGCGGTGAGAATCGAGGGGTTCGATTGCCGTCTGGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATCTTATAACACGCTCCTCGTCTCCTTCCCCTTCCTTCCTCCCCTTTTTCTCTTTCCGCTCAACATTTTCTCGGGAAAATTCATCTCTGCTTACACTCCCTTTCCCTTCA
GAGAGAAAAAAAGAATCAAAAAGGAAGAAGATGAACCAGGTGGCGGTTCAACGGAACGTGTTTTCAGTGCGTGAAGAGATGATGAGAGCTGCAGACACCGACCGCCGTGA
ACGACTGGTTTGCCCAAAGCCTCGCCGTCTCGGACTCATTAACACCACCGTCAACGACAACCCATTTAGACATCGTTTTGATTCCGTAGCTGCTAATGATGCTTTGGATC
TTCTCTTCTTGAAGGGAGGTTGTGATTTGGAGAATTTTAACAGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTATTTATGTGGGACGCCGCCCAGCAGAGTAGCTAAC
CCATTAATCCAAGACGCTAGATTTGGGAACGAGAAGCCAAAGATGCTCCCCGTGTTCTCGCCGGAAGTGGCTCCTCCTCCGTATTCGCCGCCACCATCAACCGATCGGAA
TGGCGGCTGGGTTCGACCAAACTTCGGAAACATCCCAGCGGTGAGAATCGAGGGGTTCGATTGCCGTCTGGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTT
AATAAAAACGTAACCGATTTGAGGGGAGCCGATCCAATGATATGGATGAAGAAGAAAAAAAAACATTTTTTCCTACAAATTAAAAAAATTGAAATTTAGAAAAAGGAAGG
TTTTTGAGAAAAACACCATTATTGTATATAACGTGGAAAGGAAATGAAAGTAAATATTATGTGAAGGAAAAGAGGGCGTTGTTAGGTTTGTGTCTATTTAGATGAGTTGA
GGGTTGATTGAGAGAGAGAGAGAGAGAG
Protein sequenceShow/hide protein sequence
MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGN
EKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA