; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg28143 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28143
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description2-iminobutanoate/2-iminopropanoate deaminase-like
Genome locationCarg_Chr16:6107240..6108679
RNA-Seq ExpressionCarg28143
SyntenyCarg28143
Gene Ontology termsGO:1901565 - organonitrogen compound catabolic process (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0019239 - deaminase activity (molecular function)
InterPro domainsIPR006056 - RidA family
IPR006175 - YjgF/YER057c/UK114 family
IPR019897 - RidA, conserved site
IPR035959 - RutC-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577421.1 Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]8.5e-9698.92Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNR+MSFKCHAISKCRDII IETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV
        LISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV
Subjt:  LISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV

KAG7015495.1 Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-97100Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV
        LISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV
Subjt:  LISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV

XP_022932153.1 2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita moschata]3.4e-8991.35Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYC++++FQIPA+NVISRPRTVTPSVGA+VSLWRRPSSIPSISNR+MSFKCHAISKC DI  I T+EAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV
        LISDHVGDQT QAL+NIGAIL+AGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQ+GALPKNAKIEIDAIALV
Subjt:  LISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV

XP_022932162.1 2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita moschata]6.1e-9496.76Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNR+MSFKCHAISKCRDII IETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV
        LISDHVGDQ  QALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSE+PFPARSTFQ+GALPKNAKIEIDAIALV
Subjt:  LISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV

XP_023553271.1 2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita pepo subsp. pepo]6.3e-9194.05Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNR+MSFKCHAISKCRDII IET +APEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV
        LISD VG+QT QAL+NIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFS++PFPARSTFQ+GALPKNAKIEIDAIALV
Subjt:  LISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV

TrEMBL top hitse value%identityAlignment
A0A0A0L6A5 Plastid-lipid associated protein2.1e-6873.26Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPS-SIPSISNRDMSFKCHAISKC-RDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPET
        MA  +A++ QIPA+  I+R R++TPS   +VSLWRRPS +IPSIS+R MSFKCHAISKC  +II I T  APEALGPYSQGIIANN ++VSGSLGLIPET
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPS-SIPSISNRDMSFKCHAISKC-RDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPET

Query:  GELISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV
        G+LISD VG+QTEQAL+N+GAILRAGGADY+RV+KTTIMLA+VADF LVNEIY +YF   P PARSTF  GALPKNAKIEIDAIA++
Subjt:  GELISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV

A0A6J1EVW2 2-iminobutanoate/2-iminopropanoate deaminase-like2.9e-9496.76Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNR+MSFKCHAISKCRDII IETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV
        LISDHVGDQ  QALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSE+PFPARSTFQ+GALPKNAKIEIDAIALV
Subjt:  LISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV

A0A6J1F0U9 2-iminobutanoate/2-iminopropanoate deaminase-like1.7e-8991.35Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYC++++FQIPA+NVISRPRTVTPSVGA+VSLWRRPSSIPSISNR+MSFKCHAISKC DI  I T+EAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV
        LISDHVGDQT QAL+NIGAIL+AGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQ+GALPKNAKIEIDAIALV
Subjt:  LISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV

A0A6J1JD57 2-iminobutanoate/2-iminopropanoate deaminase-like1.6e-8789.73Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYC+A++FQIPA+NVISRPRTVTPSVGA+VSLWRRPSSIPSISNR+MSFKCHAISKC DI  IET EAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV
        LISDHVG+Q EQAL+NIGAIL+AGGADYNRVVKTTIMLADVADFALVN+IYARYFSE P PARSTFQ GALPKNAKIEIDAIA+V
Subjt:  LISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV

A0RZC7 Plastid-lipid associated protein7.3e-6973.26Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPS-SIPSISNRDMSFKCHAISKC-RDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPET
        MA  +A++ QIPA+  I+R R++TPS G +VSLWRRPS +IPSIS+  MSFKCHAISKC  +II I T  APEALGPYSQGIIANN ++VSGSLGLIPET
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPS-SIPSISNRDMSFKCHAISKC-RDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPET

Query:  GELISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV
        G+LISD VG+QTEQAL+N+GAILRAGGADY+RV+KTTIMLA+VADF LVNEIY +YF   P PARSTF  GALPKNAKIEIDAIA++
Subjt:  GELISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV

SwissProt top hitse value%identityAlignment
P52758 2-iminobutanoate/2-iminopropanoate deaminase2.0e-3149.18Show/hide
Query:  LIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPA
        +I T +AP A+GPYSQ ++ +  I++SG +G+ P +G+L+S  V ++ +QAL+N+G IL+A G D+  VVKTT++LAD+ DF  VNEIY +YF    FPA
Subjt:  LIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPA

Query:  RSTFQIGALPKNAKIEIDAIAL
        R+ +Q+ ALPK ++IEI+A+A+
Subjt:  RSTFQIGALPKNAKIEIDAIAL

P80601 2-iminobutanoate/2-iminopropanoate deaminase4.9e-3047.54Show/hide
Query:  LIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPA
        +I T +AP A+GPYSQ ++ +  I++SG LG+ P +G+L+   V ++ +QAL NIG IL+A G D+  VVK T++LAD+ DF+ VN++Y +YF +  FPA
Subjt:  LIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPA

Query:  RSTFQIGALPKNAKIEIDAIAL
        R+ +Q+ ALPK  ++EI+AIA+
Subjt:  RSTFQIGALPKNAKIEIDAIAL

Q10121 RutC family protein C23G10.25.3e-3252.46Show/hide
Query:  LIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPA
        +I +  AP A+GPYSQ + A N I++SGSLGL P+TG+L  + V +QT Q+L+N+G +L+A GADY  VVKTT++L ++ADFA VNE+Y +YF + P+PA
Subjt:  LIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPA

Query:  RSTFQIGALPKNAKIEIDAIAL
        R+ +Q+ ALPK   +EI+A+A+
Subjt:  RSTFQIGALPKNAKIEIDAIAL

Q3T114 2-iminobutanoate/2-iminopropanoate deaminase2.2e-3047.54Show/hide
Query:  LIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPA
        +I T +AP A+GPYSQ ++ +  I++SG LG+ P +G+L+   V ++ +QAL NIG IL+A G D+  VVK T++LAD+ DF+ VN++Y +YF +  FPA
Subjt:  LIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTEQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPA

Query:  RSTFQIGALPKNAKIEIDAIAL
        R+ +Q+ ALPK  ++EI+AIA+
Subjt:  RSTFQIGALPKNAKIEIDAIAL

Q94JQ4 Reactive Intermediate Deaminase A, chloroplastic6.2e-4158.06Show/hide
Query:  ASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTEQALRNIGAILRAGGADY
        A VSL+R  S  P  ++  +S    ++ K     ++ T++AP ALGPYSQ I ANN +F+SG LGLIPETG+ +S+ V DQTEQ L+N+G IL+A GADY
Subjt:  ASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTEQALRNIGAILRAGGADY

Query:  NRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIA
        + VVKTTIMLAD+ADF  VNEIYA+YF   P PARST+Q+ ALP NAKIEI+ IA
Subjt:  NRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIA

Arabidopsis top hitse value%identityAlignment
AT3G20390.1 endoribonuclease L-PSP family protein4.4e-4258.06Show/hide
Query:  ASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTEQALRNIGAILRAGGADY
        A VSL+R  S  P  ++  +S    ++ K     ++ T++AP ALGPYSQ I ANN +F+SG LGLIPETG+ +S+ V DQTEQ L+N+G IL+A GADY
Subjt:  ASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTEQALRNIGAILRAGGADY

Query:  NRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIA
        + VVKTTIMLAD+ADF  VNEIYA+YF   P PARST+Q+ ALP NAKIEI+ IA
Subjt:  NRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTACTGCTCAGCAAACAGCTTCCAAATCCCGGCCACCAACGTCATTTCACGGCCGCGCACTGTCACTCCCTCTGTCGGCGCCTCCGTCTCCTTGTGGCGCCGCCC
TTCTTCTATTCCATCTATTTCAAACCGCGACATGTCCTTCAAATGCCATGCCATTTCCAAGTGTCGTGATATCATACTTATTGAAACCAAAGAGGCTCCAGAAGCATTAG
GGCCATATTCTCAAGGCATCATTGCCAACAACTTTATATTTGTGTCTGGCTCCCTGGGTCTGATTCCCGAGACAGGAGAATTAATTTCTGACCATGTTGGAGACCAAACC
GAGCAGGCCCTCAGAAATATAGGTGCAATATTGAGAGCTGGAGGTGCAGACTATAATAGAGTGGTTAAGACAACTATTATGCTGGCTGATGTAGCAGACTTTGCATTAGT
GAATGAAATTTATGCTCGATACTTCTCCGAAAAACCTTTTCCAGCTCGGTCAACATTTCAGATTGGAGCGTTGCCCAAAAATGCCAAGATCGAAATCGATGCAATAGCTT
TGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTACTGCTCAGCAAACAGCTTCCAAATCCCGGCCACCAACGTCATTTCACGGCCGCGCACTGTCACTCCCTCTGTCGGCGCCTCCGTCTCCTTGTGGCGCCGCCC
TTCTTCTATTCCATCTATTTCAAACCGCGACATGTCCTTCAAATGCCATGCCATTTCCAAGTGTCGTGATATCATACTTATTGAAACCAAAGAGGCTCCAGAAGCATTAG
GGCCATATTCTCAAGGCATCATTGCCAACAACTTTATATTTGTGTCTGGCTCCCTGGGTCTGATTCCCGAGACAGGAGAATTAATTTCTGACCATGTTGGAGACCAAACC
GAGCAGGCCCTCAGAAATATAGGTGCAATATTGAGAGCTGGAGGTGCAGACTATAATAGAGTGGTTAAGACAACTATTATGCTGGCTGATGTAGCAGACTTTGCATTAGT
GAATGAAATTTATGCTCGATACTTCTCCGAAAAACCTTTTCCAGCTCGGTCAACATTTCAGATTGGAGCGTTGCCCAAAAATGCCAAGATCGAAATCGATGCAATAGCTT
TGGTTTAA
Protein sequenceShow/hide protein sequence
MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRDMSFKCHAISKCRDIILIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQT
EQALRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEIDAIALV