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Carg28155 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28155
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCOP9 signalosome complex subunit 8-like
Genome locationCarg_Chr19:2794437..2799125
RNA-Seq ExpressionCarg28155
SyntenyCarg28155
Gene Ontology termsGO:0000338 - protein deneddylation (biological process)
GO:0010387 - COP9 signalosome assembly (biological process)
GO:0050896 - response to stimulus (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008180 - COP9 signalosome (cellular component)
InterPro domainsIPR033205 - COP9 signalosome, subunit CSN8
IPR033464 - CSN8/PSMD8/EIF3K


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571729.1 COP9 signalosome complex subunit 8, partial [Cucurbita argyrosperma subsp. sororia]3.3e-6884.05Show/hide
Query:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVS
        AAAEGVDY DEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV                         RRMFQLLVS
Subjt:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVS

Query:  AYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        AYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
Subjt:  AYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY

KAG7011450.1 COP9 signalosome complex subunit 8, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-73100Show/hide
Query:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVRRMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYV
        AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVRRMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYV
Subjt:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVRRMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYV

Query:  TRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        TRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
Subjt:  TRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY

XP_022963990.1 COP9 signalosome complex subunit 8-like [Cucurbita moschata]2.6e-6581.6Show/hide
Query:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVS
        AAAEGVDY DEWPYVIHFLGYLYVDDINSARFFWKSIPST+KE+RPELVAVWKIAQKLWIQDHRGV                         RRMFQLLVS
Subjt:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVS

Query:  AYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        AYSTISIHDAAHFLGMN EEAKNYVT RGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
Subjt:  AYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY

XP_022967528.1 COP9 signalosome complex subunit 8-like [Cucurbita maxima]7.5e-6580.37Show/hide
Query:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVS
        AAAEGVDY DEWPYVIHFLG+LYVDDINSARF WKSIPST+KE+RPELVAVWKIAQ+LWIQDHRGV                         RRMFQLLVS
Subjt:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVS

Query:  AYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        AYSTISIHDAAHFLGMNEEE KNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
Subjt:  AYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY

XP_023553641.1 COP9 signalosome complex subunit 8-like [Cucurbita pepo subsp. pepo]5.2e-6682.21Show/hide
Query:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVS
        AAAEGVDY DEWPYVIHFLGYLYVDDINSARFFWKSIPST+KE+RPELVAVWKIAQKLWIQDHRGV                         RRMFQLLVS
Subjt:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVS

Query:  AYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        AYSTISI DAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
Subjt:  AYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY

TrEMBL top hitse value%identityAlignment
A0A1S3BMN0 COP9 signalosome complex subunit 8 isoform X12.6e-5569.33Show/hide
Query:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVS
        AAAEG+ Y DEWPY IHFLGY YVDDINSARF WK+IPST+KE+RPELVAVWKI QKLW +DHRGV                         RRMFQLLVS
Subjt:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVS

Query:  AYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        AYSTIS+HD A  LGMNEEEAK YVT++GWIVD+AS+M TVKKQE+  EQKLDSSKLQRLTEY
Subjt:  AYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY

A0A6J1EJA8 COP9 signalosome complex subunit 8-like4.3e-5871.78Show/hide
Query:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVS
        AAAEG+ Y DEWPY IHFLGY YVDDINSARF WK+IPST+KE+RPELVAVWKI QKLWI+DH GV                         +RMFQLLVS
Subjt:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVS

Query:  AYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        AYSTISIHD AHFLGMNEEEAKNYVT +GWIVDVAS+M TVKKQ+I  EQKLDSSKLQRLTEY
Subjt:  AYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY

A0A6J1HJJ3 COP9 signalosome complex subunit 8-like1.3e-6581.6Show/hide
Query:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVS
        AAAEGVDY DEWPYVIHFLGYLYVDDINSARFFWKSIPST+KE+RPELVAVWKIAQKLWIQDHRGV                         RRMFQLLVS
Subjt:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVS

Query:  AYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        AYSTISIHDAAHFLGMN EEAKNYVT RGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
Subjt:  AYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY

A0A6J1HVB2 COP9 signalosome complex subunit 8-like3.6e-6580.37Show/hide
Query:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVS
        AAAEGVDY DEWPYVIHFLG+LYVDDINSARF WKSIPST+KE+RPELVAVWKIAQ+LWIQDHRGV                         RRMFQLLVS
Subjt:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVS

Query:  AYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        AYSTISIHDAAHFLGMNEEE KNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
Subjt:  AYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY

A0A6J1JQ49 COP9 signalosome complex subunit 8-like2.1e-5771.78Show/hide
Query:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVS
        AAAEG+ Y DEWPY IHFLGYLYVDDINSARF WK+IPST+KE+RPELVAVWKI QKLWI+D+ GV                         +RMFQLLVS
Subjt:  AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVS

Query:  AYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        AYSTISIHD AHFLGMNEEEAKNYVT +GWIVDVAS+M TVKKQ+I  EQKLDSSKLQRLTEY
Subjt:  AYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY

SwissProt top hitse value%identityAlignment
P43255 COP9 signalosome complex subunit 85.6e-4756.17Show/hide
Query:  AAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVSA
        A+EG++YHD+WPY IH LGY YVDD +SARF WK IP+ +KE +PE+VA W I QKLW  D+ GV                         +RMFQLL+SA
Subjt:  AAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVSA

Query:  YSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        YSTI+IHD A FLGM E++A  YV   GW VD AS+M +VKKQ + REQK+DSSKLQRLTEY
Subjt:  YSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY

Q6GQA6 COP9 signalosome complex subunit 82.8e-1432.64Show/hide
Query:  YLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVSAYSTISIHDAAHFLGMNEEE
        YL  +D+N+AR+ WK IPS +K    EL  +W++ QK+W +D  G+                         +R F L+  AY++IS  D A F+G+  EE
Subjt:  YLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVSAYSTISIHDAAHFLGMNEEE

Query:  AKNYVTRRGWIVDVASEMLTVKKQEIGREQKL-DSSKLQRLTEY
        A   V  +GW  D A+ M+  KK +      + +  +L RLT+Y
Subjt:  AKNYVTRRGWIVDVASEMLTVKKQEIGREQKL-DSSKLQRLTEY

Q6P637 COP9 signalosome complex subunit 87.4e-1532.64Show/hide
Query:  YLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVSAYSTISIHDAAHFLGMNEEE
        YL  +D+N+AR+ WK IP  +K    EL  +W++ QK+W +D  G+                         RR F L+  AY++IS  D A F+G++ EE
Subjt:  YLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVSAYSTISIHDAAHFLGMNEEE

Query:  AKNYVTRRGWIVDVASEMLTVKKQEIGREQKL-DSSKLQRLTEY
        A   V  +GW  D+A+ M+  KK +      + +  +L RLT+Y
Subjt:  AKNYVTRRGWIVDVASEMLTVKKQEIGREQKL-DSSKLQRLTEY

Q7ZUZ0 COP9 signalosome complex subunit 81.4e-1330.56Show/hide
Query:  YLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVSAYSTISIHDAAHFLGMNEEE
        YL  +D+N+AR+ WK IP  +K   PE+ A+W + Q++W +D  G+                         RR + L+  AY++IS  D A F+G + EE
Subjt:  YLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVSAYSTISIHDAAHFLGMNEEE

Query:  AKNYVTRRGWIVDVASEMLTVKKQEIGREQKL-DSSKLQRLTEY
        A   V   GW  D  + M+  +K +      + +  +L RLT+Y
Subjt:  AKNYVTRRGWIVDVASEMLTVKKQEIGREQKL-DSSKLQRLTEY

Q8VBV7 COP9 signalosome complex subunit 87.7e-1230.71Show/hide
Query:  YLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVSAYSTISIHDAAHFLGMNEEE
        YL  +D+N+AR+ WK IP  +K    EL  +W + Q++W +D  G+                         RR F L+  AY++I   D A F+G+  EE
Subjt:  YLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVSAYSTISIHDAAHFLGMNEEE

Query:  AKNYVTRRGWIVDVASEMLTVKKQEIG
        A   V  +GW  D  + M+  +K   G
Subjt:  AKNYVTRRGWIVDVASEMLTVKKQEIG

Arabidopsis top hitse value%identityAlignment
AT4G14110.1 COP9 signalosome, subunit CSN84.0e-4856.17Show/hide
Query:  AAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVSA
        A+EG++YHD+WPY IH LGY YVDD +SARF WK IP+ +KE +PE+VA W I QKLW  D+ GV                         +RMFQLL+SA
Subjt:  AAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGV-------------------------RRMFQLLVSA

Query:  YSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        YSTI+IHD A FLGM E++A  YV   GW VD AS+M +VKKQ + REQK+DSSKLQRLTEY
Subjt:  YSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTGCAGCCGAGGGCGTTGATTATCATGATGAATGGCCTTACGTGATCCATTTTCTTGGCTACCTTTACGTCGATGACATCAATAGTGCTCGATTTTTCTGGAAATCAAT
ACCTTCCACTATGAAAGAACACCGACCAGAACTGGTTGCCGTTTGGAAAATTGCCCAAAAGCTATGGATTCAGGACCATAGGGGCGTAAGGAGAATGTTTCAGTTGCTGG
TGTCTGCATATTCTACAATAAGCATCCATGATGCAGCTCACTTCTTGGGAATGAATGAGGAAGAAGCCAAAAATTATGTAACAAGGCGAGGATGGATTGTTGATGTTGCT
TCTGAAATGTTGACTGTGAAGAAACAAGAAATTGGGAGAGAGCAGAAGTTAGATTCCAGTAAATTGCAGCGCTTGACCGAATAT
mRNA sequenceShow/hide mRNA sequence
GCTGCAGCCGAGGGCGTTGATTATCATGATGAATGGCCTTACGTGATCCATTTTCTTGGCTACCTTTACGTCGATGACATCAATAGTGCTCGATTTTTCTGGAAATCAAT
ACCTTCCACTATGAAAGAACACCGACCAGAACTGGTTGCCGTTTGGAAAATTGCCCAAAAGCTATGGATTCAGGACCATAGGGGCGTAAGGAGAATGTTTCAGTTGCTGG
TGTCTGCATATTCTACAATAAGCATCCATGATGCAGCTCACTTCTTGGGAATGAATGAGGAAGAAGCCAAAAATTATGTAACAAGGCGAGGATGGATTGTTGATGTTGCT
TCTGAAATGTTGACTGTGAAGAAACAAGAAATTGGGAGAGAGCAGAAGTTAGATTCCAGTAAATTGCAGCGCTTGACCGAATAT
Protein sequenceShow/hide protein sequence
AAAEGVDYHDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVRRMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVA
SEMLTVKKQEIGREQKLDSSKLQRLTEY