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Carg28173 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28173
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncucumber peeling cupredoxin-like
Genome locationCarg_Chr09:10178540..10180213
RNA-Seq ExpressionCarg28173
SyntenyCarg28173
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0046658 - anchored component of plasma membrane (cellular component)
GO:0009055 - electron transfer activity (molecular function)
InterPro domainsIPR003245 - Phytocyanin domain
IPR008972 - Cupredoxin
IPR039391 - Phytocyanin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025138.1 hypothetical protein SDJN02_13961, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-86100Show/hide
Query:  MSRITGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTL
        MSRITGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTL
Subjt:  MSRITGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTL

Query:  HNPPRRLYFVCTDGNHCNNGMKFSIDVLPKATTTPNMALKIDVFPLLLFITIMANMFFV
        HNPPRRLYFVCTDGNHCNNGMKFSIDVLPKATTTPNMALKIDVFPLLLFITIMANMFFV
Subjt:  HNPPRRLYFVCTDGNHCNNGMKFSIDVLPKATTTPNMALKIDVFPLLLFITIMANMFFV

XP_008463059.1 PREDICTED: umecyanin-like [Cucumis melo]1.9e-5163.19Show/hide
Query:  MSRITGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTL
        MSRI   + S+ CL FIG++  V+V +DH+VGGDFGWNLP TLTF+SEWARN TFF+ DRL+FI RANETHT++EA S+KD+D C++QGIVFD++II TL
Subjt:  MSRITGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTL

Query:  HN---PPRRLYFVCTDGNHCNNGMKFSIDVLPKATTTPNMALKIDVF-PLLLFITIMANMFFV
         N    PR  YF+CTDGNHCN GMKF+++VLP + T PN A+K  V  P+L FIT+MAN+FFV
Subjt:  HN---PPRRLYFVCTDGNHCNNGMKFSIDVLPKATTTPNMALKIDVF-PLLLFITIMANMFFV

XP_022930145.1 cucumber peeling cupredoxin-like [Cucurbita moschata]7.1e-8396.86Show/hide
Query:  MSRITGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTL
        MSRITGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLP  LTFFS+WARNTTFFVGDRLKFIPRANETHTY EAESQKDYDGCIEQGIVFDSTIILTL
Subjt:  MSRITGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTL

Query:  HNPPRRLYFVCTDGNHCNNGMKFSIDVLPKATTTPNMALKIDVFPLLLFITIMANMFFV
        HNPPRR YFVCTDGNHCNNGMKFSIDVLPKATTTPNMALKIDVFPLLLFITIMANMFFV
Subjt:  HNPPRRLYFVCTDGNHCNNGMKFSIDVLPKATTTPNMALKIDVFPLLLFITIMANMFFV

XP_022974069.1 cucumber peeling cupredoxin-like [Cucurbita maxima]3.6e-7993.75Show/hide
Query:  MSRITGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTL
        M+R  GSV SVACLL IGTLLPVIVAVDHEVGGDFGWNLP TLTFFSEWARNTTFFVGDRLKF+PRANETHTYAEAESQKDYDGCIEQGIVFDS+IILTL
Subjt:  MSRITGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTL

Query:  HNPPRRLYFVCTDGNHCNNGMKFSIDVLPK-ATTTPNMALKIDVFPLLLFITIMANMFFV
        HNPPRR YFVCTDGNHCNNGMKFSIDVLPK ATTTPNMALKIDVFPLLLFITIMANMFFV
Subjt:  HNPPRRLYFVCTDGNHCNNGMKFSIDVLPK-ATTTPNMALKIDVFPLLLFITIMANMFFV

XP_038884426.1 umecyanin-like [Benincasa hispida]2.8e-5569.48Show/hide
Query:  SVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTL-HNPPR
        ++ S+ CL   GT   V+VA+DHEVGGDFGWNLP TLTFFS+WARN TFFVGDRL+F PRANETHTYAEA+S+K++D C+EQGIVFD +IILTL +N   
Subjt:  SVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTL-HNPPR

Query:  RLYFVCTDGNHCNNGMKFSIDVLPKATTTPNMALKID-VFPLLLFITIMANMFF
        R YF+CTDGNHCN GMKF+IDVLP + TTPN A+KID + P+LLFI  MAN+FF
Subjt:  RLYFVCTDGNHCNNGMKFSIDVLPKATTTPNMALKID-VFPLLLFITIMANMFF

TrEMBL top hitse value%identityAlignment
A0A0A0LZE7 Phytocyanin domain-containing protein5.0e-4259.24Show/hide
Query:  TGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTLHNPP
        T  V  +A  LFI  LLP + AVD++VGGDFGWNLP T TFFSEWA N TFFVGDRL+F   ANETH YA   SQ + DGC++ GIVF   +   L  P 
Subjt:  TGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTLHNPP

Query:  RRLYFVCTDGNHCNNGMKFSIDVLP-KATTTPNMALKIDVFP-LLLFITIMANMFFV
        RR YF+C  GNHCN GMKF+IDV+P   +  PN ALKID FP LLLFIT++ N  F+
Subjt:  RRLYFVCTDGNHCNNGMKFSIDVLP-KATTTPNMALKIDVFP-LLLFITIMANMFFV

A0A1S3CJX2 umecyanin-like9.1e-5263.19Show/hide
Query:  MSRITGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTL
        MSRI   + S+ CL FIG++  V+V +DH+VGGDFGWNLP TLTF+SEWARN TFF+ DRL+FI RANETHT++EA S+KD+D C++QGIVFD++II TL
Subjt:  MSRITGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTL

Query:  HN---PPRRLYFVCTDGNHCNNGMKFSIDVLPKATTTPNMALKIDVF-PLLLFITIMANMFFV
         N    PR  YF+CTDGNHCN GMKF+++VLP + T PN A+K  V  P+L FIT+MAN+FFV
Subjt:  HN---PPRRLYFVCTDGNHCNNGMKFSIDVLPKATTTPNMALKIDVF-PLLLFITIMANMFFV

A0A6J1E367 umecyanin-like5.5e-4962.18Show/hide
Query:  SVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTLHNPPRR
        +  S+ CL FIG LL V+V VD+++GGDFGWNLP TLTFFSEWARN+TFFVGD L+FIPRANETHT+AE++SQ ++DGC+++G+VFDSTI +TL  P RR
Subjt:  SVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTLHNPPRR

Query:  LYFVCTDGNHCNNGMKFSIDVLPKA---TTTPNMALKIDVFPLLLFITI-MANMFF
         YF+ TDGNHCN GMKF+IDV  ++   T  PN A+K+   P+L F T+ MA +FF
Subjt:  LYFVCTDGNHCNNGMKFSIDVLPKA---TTTPNMALKIDVFPLLLFITI-MANMFF

A0A6J1EW61 cucumber peeling cupredoxin-like3.4e-8396.86Show/hide
Query:  MSRITGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTL
        MSRITGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLP  LTFFS+WARNTTFFVGDRLKFIPRANETHTY EAESQKDYDGCIEQGIVFDSTIILTL
Subjt:  MSRITGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTL

Query:  HNPPRRLYFVCTDGNHCNNGMKFSIDVLPKATTTPNMALKIDVFPLLLFITIMANMFFV
        HNPPRR YFVCTDGNHCNNGMKFSIDVLPKATTTPNMALKIDVFPLLLFITIMANMFFV
Subjt:  HNPPRRLYFVCTDGNHCNNGMKFSIDVLPKATTTPNMALKIDVFPLLLFITIMANMFFV

A0A6J1IGG2 cucumber peeling cupredoxin-like1.8e-7993.75Show/hide
Query:  MSRITGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTL
        M+R  GSV SVACLL IGTLLPVIVAVDHEVGGDFGWNLP TLTFFSEWARNTTFFVGDRLKF+PRANETHTYAEAESQKDYDGCIEQGIVFDS+IILTL
Subjt:  MSRITGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTL

Query:  HNPPRRLYFVCTDGNHCNNGMKFSIDVLPK-ATTTPNMALKIDVFPLLLFITIMANMFFV
        HNPPRR YFVCTDGNHCNNGMKFSIDVLPK ATTTPNMALKIDVFPLLLFITIMANMFFV
Subjt:  HNPPRRLYFVCTDGNHCNNGMKFSIDVLPK-ATTTPNMALKIDVFPLLLFITIMANMFFV

SwissProt top hitse value%identityAlignment
O82081 Uclacyanin 12.3e-1234.96Show/hide
Query:  TLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGC--IEQGIVFDSTIILTLHNPPRRLYFVCTDGNH
        TL+ + VA DH +GG  GW +  +L     WA   TF VGD L F   A   H   E  ++ ++D C  ++  I F +   L     P + YF+C    H
Subjt:  TLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGC--IEQGIVFDSTIILTLHNPPRRLYFVCTDGNH

Query:  CNNGMKFSIDVLPKATTTPNMAL
        C+ GMK  ++V+P AT  P   L
Subjt:  CNNGMKFSIDVLPKATTTPNMAL

P29602 Cucumber peeling cupredoxin2.1e-1334.62Show/hide
Query:  HEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGC----IEQGIVFDSTIILTLHNPPRRLYFVCTDGNHCNNGMKFS
        H VG + GW++P +  F+S+WA   TF VGD L+F   AN  H   E E+++ +D C     +  +   S +I  L       YFVCT G HC+NG K S
Subjt:  HEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGC----IEQGIVFDSTIILTLHNPPRRLYFVCTDGNHCNNGMKFS

Query:  IDVL---------PKATTTPNMALKIDVFP
        I+V+         P +++ P+  +   V P
Subjt:  IDVL---------PKATTTPNMALKIDVFP

P42849 Umecyanin2.4e-0933.98Show/hide
Query:  DHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTI--ILTLHNPPRRLYFVCTDGNHCNNGMKFSI
        D++VGGD  W  P    F+  WA   TF VGD L+F   A   H  A   ++  +D C ++  +   T   +  + N     Y++CT G+HC  G K SI
Subjt:  DHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTI--ILTLHNPPRRLYFVCTDGNHCNNGMKFSI

Query:  DVL
        +V+
Subjt:  DVL

Q07488 Blue copper protein7.5e-1133.63Show/hide
Query:  VIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTI--ILTLHNPPRRLYFVCTDGNHCNNG
        V+ A D++VG D  W  P+   F++ WA   TF VGD L+F   A   H  A   S+  ++ C ++  +   T+  +  + N     YF+CT G+HC  G
Subjt:  VIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTI--ILTLHNPPRRLYFVCTDGNHCNNG

Query:  MKFSIDVLPKATT
         K SI V+    T
Subjt:  MKFSIDVLPKATT

Arabidopsis top hitse value%identityAlignment
AT2G32300.1 uclacyanin 11.7e-1334.96Show/hide
Query:  TLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGC--IEQGIVFDSTIILTLHNPPRRLYFVCTDGNH
        TL+ + VA DH +GG  GW +  +L     WA   TF VGD L F   A   H   E  ++ ++D C  ++  I F +   L     P + YF+C    H
Subjt:  TLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGC--IEQGIVFDSTIILTLHNPPRRLYFVCTDGNH

Query:  CNNGMKFSIDVLPKATTTPNMAL
        C+ GMK  ++V+P AT  P   L
Subjt:  CNNGMKFSIDVLPKATTTPNMAL

AT3G17675.1 Cupredoxin superfamily protein2.0e-0630.1Show/hide
Query:  DHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYD-GCIEQGIVFDSTIILTLHNPPRRLYFVCTDGNHCNNGMKFSID
        +H VG   GW L    T ++ W +   F VGD L F  ++++ H   +  S    D G      +F       + +   +L+F+C   +HC NG K SI+
Subjt:  DHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYD-GCIEQGIVFDSTIILTLHNPPRRLYFVCTDGNHCNNGMKFSID

Query:  VLP
        V P
Subjt:  VLP

AT3G18590.1 early nodulin-like protein 52.6e-0624.43Show/hide
Query:  VACLLFIGT--LLPVIVAVDHEVGGDFGWNLPLTLTF---FSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGC--IEQGIVFDSTIILTLHNP
        +  ++F+ T  +   + + + EVGG+ GW +P + T    F++WA +  F VGD L+F      T       S+++Y  C   +  +  ++   +   + 
Subjt:  VACLLFIGT--LLPVIVAVDHEVGGDFGWNLPLTLTF---FSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGC--IEQGIVFDSTIILTLHNP

Query:  PRRLYFVCTDGNHCNNGMKFSIDVLPKATTT
        P   YF+     HC  G K  + V+   ++T
Subjt:  PRRLYFVCTDGNHCNNGMKFSIDVLPKATTT

AT3G20570.1 early nodulin-like protein 97.4e-0624.79Show/hide
Query:  AVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQG----IVFDSTIILTLHNPPRRLYFVCTDGNHCNNGM
        A +  VGG  GW +P     +S+WA  + F +GD L F+ ++N+        ++  YD C             T +   H+ P   YF+  + ++C    
Subjt:  AVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQG----IVFDSTIILTLHNPPRRLYFVCTDGNHCNNGM

Query:  KFSIDVLPKATTTPNMA
        K  + V+   +   N A
Subjt:  KFSIDVLPKATTTPNMA

AT5G20230.1 blue-copper-binding protein5.3e-1233.63Show/hide
Query:  VIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTI--ILTLHNPPRRLYFVCTDGNHCNNG
        V+ A D++VG D  W  P+   F++ WA   TF VGD L+F   A   H  A   S+  ++ C ++  +   T+  +  + N     YF+CT G+HC  G
Subjt:  VIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTI--ILTLHNPPRRLYFVCTDGNHCNNG

Query:  MKFSIDVLPKATT
         K SI V+    T
Subjt:  MKFSIDVLPKATT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGAATTACGGGTTCGGTTGGTTCGGTTGCTTGCCTCTTGTTTATTGGAACTCTCTTACCCGTCATTGTTGCTGTTGACCACGAGGTTGGAGGTGATTTTGGTTG
GAACTTGCCTCTGACGCTCACCTTCTTCTCTGAATGGGCTCGTAATACCACGTTTTTTGTCGGTGACAGGCTAAAATTCATACCACGAGCCAACGAGACACACACATACG
CCGAAGCCGAATCTCAAAAGGATTATGATGGATGCATAGAACAAGGAATAGTGTTTGATTCCACCATTATTTTAACCCTACACAATCCTCCTCGTCGTCTTTACTTTGTG
TGCACTGATGGTAACCATTGCAACAATGGCATGAAATTTTCCATTGATGTCTTACCCAAAGCAACAACAACGCCCAATATGGCACTCAAAATTGATGTCTTCCCCTTGCT
TCTCTTCATCACTATCATGGCTAATATGTTCTTTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGAATTACGGGTTCGGTTGGTTCGGTTGCTTGCCTCTTGTTTATTGGAACTCTCTTACCCGTCATTGTTGCTGTTGACCACGAGGTTGGAGGTGATTTTGGTTG
GAACTTGCCTCTGACGCTCACCTTCTTCTCTGAATGGGCTCGTAATACCACGTTTTTTGTCGGTGACAGGCTAAAATTCATACCACGAGCCAACGAGACACACACATACG
CCGAAGCCGAATCTCAAAAGGATTATGATGGATGCATAGAACAAGGAATAGTGTTTGATTCCACCATTATTTTAACCCTACACAATCCTCCTCGTCGTCTTTACTTTGTG
TGCACTGATGGTAACCATTGCAACAATGGCATGAAATTTTCCATTGATGTCTTACCCAAAGCAACAACAACGCCCAATATGGCACTCAAAATTGATGTCTTCCCCTTGCT
TCTCTTCATCACTATCATGGCTAATATGTTCTTTGTTTGA
Protein sequenceShow/hide protein sequence
MSRITGSVGSVACLLFIGTLLPVIVAVDHEVGGDFGWNLPLTLTFFSEWARNTTFFVGDRLKFIPRANETHTYAEAESQKDYDGCIEQGIVFDSTIILTLHNPPRRLYFV
CTDGNHCNNGMKFSIDVLPKATTTPNMALKIDVFPLLLFITIMANMFFV