CuGenDBv2

Gene ID	Carg28180
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ring/U-Box superfamily protein
Genome location	Carg_Chr04:11628500..11629876
RNA-Seq Expression	Carg28180
Synteny	Carg28180
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7035972.1 hypothetical protein SDJN02_02772, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.5e-69

82.07

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Query:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL
        ENNVPN ++RELL RRSVST LSS   ESLDQL RSYIDR+G STSNGDLDE +SPYTSAE       QTAGQAGS  SHPL LPLPPAM  RQLW+HEL
Subjt:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL

Query:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP
        SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRT+GSE  IFEDSL   +P
Subjt:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP

XP_022957802.1 uncharacterized protein LOC111459234 [Cucurbita moschata]

2.5e-69

82.07

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Query:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL
        ENNVPN ++RELL RRSVST LSS   ESLDQL RSYIDR+G STSNGDLDE +SPYTSAE       QTAGQAGS  SHPL LPLPPAM  RQLW+HEL
Subjt:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL

Query:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP
        SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRT+GSE  IFEDSL   +P
Subjt:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP

XP_022996393.1 uncharacterized protein LOC111491630 isoform X1 [Cucurbita maxima]

2.3e-67

80.98

Show/hide

Query:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL
        ENNV N ++RELL RRSVST LSS   ESLD+L RSYIDRRG STSNGDLDE MSPYTS E       QT GQAGS  SHPL LPLPPAM PRQLW+HEL
Subjt:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL

Query:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP
        SHDSWSR DFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVS ALNRT GSE EIFEDSL   +P
Subjt:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP

XP_022996395.1 uncharacterized protein LOC111491630 isoform X2 [Cucurbita maxima]

2.3e-67

80.98

Show/hide

Query:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL
        ENNV N ++RELL RRSVST LSS   ESLD+L RSYIDRRG STSNGDLDE MSPYTS E       QT GQAGS  SHPL LPLPPAM PRQLW+HEL
Subjt:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL

Query:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP
        SHDSWSR DFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVS ALNRT GSE EIFEDSL   +P
Subjt:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP

XP_023541427.1 uncharacterized protein LOC111801613 [Cucurbita pepo subsp. pepo]

2.9e-70

82.61

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Query:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL
        ENN PN ++RELL RRSVST LSS   ESLDQL RSYIDR+G STSNGDLDE MSPYTSAE       QT GQAGSV SHPL LPLPPAM PRQLW+HEL
Subjt:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL

Query:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP
        SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRT+GSE  IFEDSL   +P
Subjt:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CG48 uncharacterized protein LOC111011121 isoform X3

2.1e-58

72.83

Show/hide

Query:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL
        ++NV + ++RELL RRSVST LSS   ESLDQL +SYIDR+GQSTSN DLDE + PYTSAE       Q+ GQA SV S   ALPLPP +  RQLW+HEL
Subjt:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL

Query:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP
        S+DSWSR DFRQQFGADWEI+NDLRIDMSRLQQRMSNLQRMLE CMDMQLELQRSIKQEVSSALNR  GSE +IFEDSL   +P
Subjt:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP

A0A6J1CGY0 uncharacterized protein LOC111011121 isoform X1

2.1e-58

72.83

Show/hide

Query:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL
        ++NV + ++RELL RRSVST LSS   ESLDQL +SYIDR+GQSTSN DLDE + PYTSAE       Q+ GQA SV S   ALPLPP +  RQLW+HEL
Subjt:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL

Query:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP
        S+DSWSR DFRQQFGADWEI+NDLRIDMSRLQQRMSNLQRMLE CMDMQLELQRSIKQEVSSALNR  GSE +IFEDSL   +P
Subjt:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP

A0A6J1H1A5 uncharacterized protein LOC111459234

1.2e-69

82.07

Show/hide

Query:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL
        ENNVPN ++RELL RRSVST LSS   ESLDQL RSYIDR+G STSNGDLDE +SPYTSAE       QTAGQAGS  SHPL LPLPPAM  RQLW+HEL
Subjt:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL

Query:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP
        SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRT+GSE  IFEDSL   +P
Subjt:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP

A0A6J1K6N1 uncharacterized protein LOC111491630 isoform X2

1.1e-67

80.98

Show/hide

Query:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL
        ENNV N ++RELL RRSVST LSS   ESLD+L RSYIDRRG STSNGDLDE MSPYTS E       QT GQAGS  SHPL LPLPPAM PRQLW+HEL
Subjt:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL

Query:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP
        SHDSWSR DFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVS ALNRT GSE EIFEDSL   +P
Subjt:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP

A0A6J1KAM9 uncharacterized protein LOC111491630 isoform X1

1.1e-67

80.98

Show/hide

Query:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL
        ENNV N ++RELL RRSVST LSS   ESLD+L RSYIDRRG STSNGDLDE MSPYTS E       QT GQAGS  SHPL LPLPPAM PRQLW+HEL
Subjt:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAE-------QTAGQAGSVASHPLALPLPPAMSPRQLWEHEL

Query:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP
        SHDSWSR DFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVS ALNRT GSE EIFEDSL   +P
Subjt:  SHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G27950.1 Ring/U-Box superfamily protein

4.4e-32

48.54

Show/hide

Query:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYT-----SAEQTAGQAG-----SVASHPLALPLPP-AMSPRQLW
        + N  N+++REL  RR VS  L S   E+L QL +SY+DRR Q+  + +  ET S +T     + +Q   Q+G     +V S PL LP P   + PR  W
Subjt:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLDETMSPYT-----SAEQTAGQAG-----SVASHPLALPLPP-AMSPRQLW

Query:  EHELSHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRT
        +H+ SH +W   D  Q  G DW+ INDLR+DM R+QQRM NLQRMLE CM+MQLELQRSI+QEVS+A++R+
Subjt:  EHELSHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRT

AT5G04460.1 RING/U-box superfamily protein

1.1e-30

46.99

Show/hide

Query:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLD---ETMSPYTSAEQTAGQAGSVASHPL-------ALPLPPAMSPRQLWE
        ++NV ++++RELL RRSVS  L S   ESLDQL +SY +RRG +  + DL    +T  P +    T  Q      + L        LP PPA  P+ +W 
Subjt:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLD---ETMSPYTSAEQTAGQAGSVASHPL-------ALPLPPAMSPRQLWE

Query:  HELSHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSE---AEIFED
         +L H SWSR    +    +WE++NDLR D++RLQQ MS +QRMLE CMDMQLELQRS++QEVS+ALNR+ G +   AE  ED
Subjt:  HELSHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSE---AEIFED

AT5G04460.2 RING/U-box superfamily protein

1.1e-30

46.99

Show/hide

Query:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLD---ETMSPYTSAEQTAGQAGSVASHPL-------ALPLPPAMSPRQLWE
        ++NV ++++RELL RRSVS  L S   ESLDQL +SY +RRG +  + DL    +T  P +    T  Q      + L        LP PPA  P+ +W 
Subjt:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLD---ETMSPYTSAEQTAGQAGSVASHPL-------ALPLPPAMSPRQLWE

Query:  HELSHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSE---AEIFED
         +L H SWSR    +    +WE++NDLR D++RLQQ MS +QRMLE CMDMQLELQRS++QEVS+ALNR+ G +   AE  ED
Subjt:  HELSHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSE---AEIFED

AT5G04460.3 RING/U-box superfamily protein

1.1e-30

46.99

Show/hide

Query:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLD---ETMSPYTSAEQTAGQAGSVASHPL-------ALPLPPAMSPRQLWE
        ++NV ++++RELL RRSVS  L S   ESLDQL +SY +RRG +  + DL    +T  P +    T  Q      + L        LP PPA  P+ +W 
Subjt:  ENNVPNVKMRELLIRRSVSTFLSS---ESLDQLNRSYIDRRGQSTSNGDLD---ETMSPYTSAEQTAGQAGSVASHPL-------ALPLPPAMSPRQLWE

Query:  HELSHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSE---AEIFED
         +L H SWSR    +    +WE++NDLR D++RLQQ MS +QRMLE CMDMQLELQRS++QEVS+ALNR+ G +   AE  ED
Subjt:  HELSHDSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSE---AEIFED

Sequences

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CDS sequence

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ATGCCCCTGGAGCTTCACATGAAAATGTTATCATTGTGGAGGATGTGCCTAATTGAGAATAATGTGCCTAATGTGAAAATGAGAGAACTTTTAATTAGGAGAAGTGTCTC
TACTTTTCTTAGTAGTGAAAGTCTTGACCAGTTAAATCGATCTTACATAGACAGGCGAGGTCAAAGTACCAGTAATGGGGATCTAGACGAGACGATGTCCCCTTACACGT
CTGCAGAACAAACTGCAGGTCAAGCGGGTTCTGTTGCGAGCCATCCACTTGCTTTGCCTCTGCCACCTGCAATGTCCCCTCGGCAACTTTGGGAACATGAATTGAGTCAT
GATAGTTGGTCAAGACGTGATTTCCGTCAGCAGTTTGGAGCTGACTGGGAGATCATTAATGATTTGAGGATCGACATGTCTAGGTTGCAGCAGAGGATGAGCAACCTACA
GAGAATGTTGGAGACATGCATGGACATGCAACTTGAGCTGCAGCGCTCAATTAAGCAAGAAGTTTCTTCTGCACTGAACCGAACAAATGGTTCAGAAGCAGAGATATTTG
AAGACAGTTTGGCAATGAGAGACCCAATTGGGACTGAGTAA

mRNA sequence

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Protein sequence

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MPLELHMKMLSLWRMCLIENNVPNVKMRELLIRRSVSTFLSSESLDQLNRSYIDRRGQSTSNGDLDETMSPYTSAEQTAGQAGSVASHPLALPLPPAMSPRQLWEHELSH
DSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRTNGSEAEIFEDSLAMRDPIGTE

Carg28180 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome