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Carg28181 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28181
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCytochrome c
Genome locationCarg_Chr06:5297126..5300623
RNA-Seq ExpressionCarg28181
SyntenyCarg28181
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process)
GO:0010336 - gibberellic acid homeostasis (biological process)
GO:0005758 - mitochondrial intermembrane space (cellular component)
GO:0070469 - respirasome (cellular component)
GO:0009055 - electron transfer activity (molecular function)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002327 - Cytochrome c, class IA/ IB
IPR009056 - Cytochrome c-like domain
IPR036909 - Cytochrome c-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028447.1 hypothetical protein SDJN02_09628 [Cucurbita argyrosperma subsp. argyrosperma]3.5e-54100Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKRRIV
        MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKRRIV
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKRRIV

Query:  PTLLLI
        PTLLLI
Subjt:  PTLLLI

XP_022930036.1 cytochrome c [Cucurbita moschata]1.3e-4898.96Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
        MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK

XP_022932892.1 cytochrome c [Cucurbita moschata]3.4e-49100Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
        MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK

XP_022973349.1 cytochrome c-like [Cucurbita maxima]9.9e-4998.96Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
        MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGR+SGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK

XP_038893188.1 cytochrome c [Benincasa hispida]1.3e-4898.96Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
        MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK

TrEMBL top hitse value%identityAlignment
A0A1S3TS68 cytochrome c1.1e-4897.92Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
        MASFDEAPPGNSK+GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYS ANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK

A0A6J1EPS9 cytochrome c6.3e-4998.96Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
        MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK

A0A6J1EY20 cytochrome c1.6e-49100Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
        MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK

A0A6J1IEB6 cytochrome c-like4.8e-4998.96Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
        MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGR+SGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK

A0A6J1JWC5 cytochrome c6.3e-4998.96Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
        MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK

SwissProt top hitse value%identityAlignment
A2Y4S9 Cytochrome c3.5e-4994.79Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
        MASF EAPPGN KAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYS ANKNMAVIWEE TLYDYLLNPKKYIPGTKMVFPGLKK
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK

P00051 Cytochrome c4.2e-5097.89Show/hide
Query:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
        ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAANKN AVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
Subjt:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK

P00052 Cytochrome c1.4e-5097.89Show/hide
Query:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
        ASFDEAPPGNSK+GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYS ANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
Subjt:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK

P62772 Cytochrome c7.1e-5097.89Show/hide
Query:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
        ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKN AV WEEKTLYDYLLNPKKYIPGTKMVFPGLKK
Subjt:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK

P62773 Cytochrome c7.1e-5097.89Show/hide
Query:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
        ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKN AV WEEKTLYDYLLNPKKYIPGTKMVFPGLKK
Subjt:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK

Arabidopsis top hitse value%identityAlignment
AT1G22840.1 CYTOCHROME C-12.8e-4992.71Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
        MASFDEAPPGN+KAGEKIF+TKCAQCHTV+ GAGHKQGPNLNGLFGRQSGTTAGYSYSAANKN AV WEEK LYDYLLNPKKYIPGTKMVFPGLKK
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK

AT1G22840.2 CYTOCHROME C-11.8e-4089.29Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYI
        MASFDEAPPGN+KAGEKIF+TKCAQCHTV+ GAGHKQGPNLNGLFGRQSGTTAGYSYSAANKN AV WEEK LYDYLLNPKK +
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYI

AT4G10040.1 cytochrome c-27.3e-5093.75Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK
        MASFDEAPPGN KAGEKIF+TKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTT GYSYSAANK+MAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKK
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGCTTTGACGAAGCCCCTCCCGGCAATTCCAAAGCTGGAGAGAAGATTTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAGGGTGCTGGTCACAAGCA
AGGTCCCAATTTGAATGGGCTATTTGGACGGCAATCTGGCACAACTGCTGGATACTCTTATTCTGCTGCCAACAAGAATATGGCCGTGATATGGGAAGAAAAGACCTTGT
ATGACTACTTGCTTAACCCCAAGAAGTATATTCCTGGAACAAAGATGGTTTTCCCAGGGCTGAAGAAACGCAGGATCGTGCCGACCTTATTGCTTATCTGA
mRNA sequenceShow/hide mRNA sequence
CGAGAAACATTGCGAGCCCTAGCCCTCAGATCTGAACAACATCTCATTCCAACGCCATGGCCAGCTTTGACGAAGCCCCTCCCGGCAATTCCAAAGCTGGAGAGAAGATT
TTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAGGGTGCTGGTCACAAGCAAGGTCCCAATTTGAATGGGCTATTTGGACGGCAATCTGGCACAACTGCTGGATA
CTCTTATTCTGCTGCCAACAAGAATATGGCCGTGATATGGGAAGAAAAGACCTTGTATGACTACTTGCTTAACCCCAAGAAGTATATTCCTGGAACAAAGATGGTTTTCC
CAGGGCTGAAGAAACGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAAGCAACTGCTTAATTGCATAATATATGGTTGATGCTTCTTCCAATCTACAATTTTTTTG
CTATCATTTTCCCCATCATCGTTAAAATAAGAACATTGAGAGGAGAGGAACTTAGAGATGAAAAGTTGGAGGTGGTTCACACACACAGACTTTTTTTTTTTTTCTTTTTC
ATTAAAAAATTCTTACTTCCCTTCCTTCGCTACACTCATTTGCAGAGTTCACCCATTTGTAGCTTACATTATTGTTATGTGAACATAACTGCTACAATTTTTTTGGCCAC
CCGGTTCTGCCAACTTATTTTCTCATAATAAATGTCACGCTGTTAGAGACT
Protein sequenceShow/hide protein sequence
MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKRRIVPTLLLI