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Carg28194 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28194
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr03:5251376..5252095
RNA-Seq ExpressionCarg28194
SyntenyCarg28194
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603959.1 hypothetical protein SDJN03_04568, partial [Cucurbita argyrosperma subsp. sororia]7.7e-6967.23Show/hide
Query:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS--------------------------------------------
        MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS                                            
Subjt:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS--------------------------------------------

Query:  --------------VKPNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAE------------------GEE
                       +PNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAE                  GEE
Subjt:  --------------VKPNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAE------------------GEE

Query:  LSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG
        LSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG
Subjt:  LSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG

KAG7033985.1 hypothetical protein SDJN02_03711, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-81100Show/hide
Query:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQISVKPNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSS
        MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQISVKPNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSS
Subjt:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQISVKPNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSS

Query:  GSEKLKLAWSEFGGGEFGRAEGEELSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG
        GSEKLKLAWSEFGGGEFGRAEGEELSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG
Subjt:  GSEKLKLAWSEFGGGEFGRAEGEELSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG

XP_022950349.1 uncharacterized protein LOC111453461 [Cucurbita moschata]5.5e-6766.81Show/hide
Query:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS--------------------------------------------
        MKTEEVEAMGLSDHLRTLLKF R TEVFAAMAFLVWTFSRLPLILRVSSDYISQIS                                            
Subjt:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS--------------------------------------------

Query:  -VK-------------PNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAE------------------GEE
         VK             PNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDF SGSEKLKLAWSEFGGGEFGRAE                  GEE
Subjt:  -VK-------------PNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAE------------------GEE

Query:  LSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG
        LSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG
Subjt:  LSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG

XP_022977278.1 uncharacterized protein LOC111477644 [Cucurbita maxima]2.1e-6665.55Show/hide
Query:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS--------------------------------------------
        MKTEEVEAMGLSDHLRTLLKFFR TEVFAAMA LVWTFSRLPLILRVSSDYISQIS                                            
Subjt:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS--------------------------------------------

Query:  --------------VKPNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAE------------------GEE
                       +PNGRLCSD+ELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEF RAE                  GEE
Subjt:  --------------VKPNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAE------------------GEE

Query:  LSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG
        LSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG
Subjt:  LSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG

XP_023543998.1 uncharacterized protein LOC111803706 [Cucurbita pepo subsp. pepo]1.5e-6464.29Show/hide
Query:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS--------------------------------------------
        MKTEEVEAMGLSDHLRTLLKF R TEV AAMAFLVWTFSRLPLILRVSSDYISQIS                                            
Subjt:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS--------------------------------------------

Query:  --------------VKPNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAE------------------GEE
                       +PNGRLCSDLELEEIAYEDKEVISEV STTAAAFTEEIEDFSSGSEKLKLAWSEFGGG FGRAE                  GEE
Subjt:  --------------VKPNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAE------------------GEE

Query:  LSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG
        LSNKEFERRIDAFIAREL+FRWEESGAVVLP+GSCLRG
Subjt:  LSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG

TrEMBL top hitse value%identityAlignment
A0A0A0KM84 Uncharacterized protein3.5e-4349.78Show/hide
Query:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS--------------------------------------------
        MKT EV+AMG+   L+ ++K FR TEV  AM FL+WTFSRLPL+LRVSSD+ISQIS                                            
Subjt:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS--------------------------------------------

Query:  ---------------VKPNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAE------------------GE
                        +PNGRLCSD E EEIAYEDKEVISEV+ST  A F+E++EDF   SEKLKL W E+GGGE  R +                  GE
Subjt:  ---------------VKPNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAE------------------GE

Query:  ELSNKEFERRIDAFIARELRFRWEESGAVVL
        ELSNKEFERRIDAFIARELRFRWEESGAVVL
Subjt:  ELSNKEFERRIDAFIARELRFRWEESGAVVL

A0A1S3B3G2 uncharacterized protein LOC1034853515.1e-4248.48Show/hide
Query:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS--------------------------------------------
        MKTE V+AMG+ + L++++K FR TEV  AM FL+WTFSRLPL+L+VSSD+ISQIS                                            
Subjt:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS--------------------------------------------

Query:  ---------------VKPNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAEG------------------E
                        +PNGRLCSD E E+IAYEDKEVISEV+ST AA FTE++E+F   SEKLKL W+EFGGGE  R +                   E
Subjt:  ---------------VKPNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAEG------------------E

Query:  ELSNKEFERRIDAFIARELRFRWEESGAVVL
        ELSN EF+RRIDAFIARELRFRWEESGAVVL
Subjt:  ELSNKEFERRIDAFIARELRFRWEESGAVVL

A0A5A7SYQ4 Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm65.1e-4248.48Show/hide
Query:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS--------------------------------------------
        MKTE V+AMG+ + L++++K FR TEV  AM FL+WTFSRLPL+L+VSSD+ISQIS                                            
Subjt:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS--------------------------------------------

Query:  ---------------VKPNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAEG------------------E
                        +PNGRLCSD E E+IAYEDKEVISEV+ST AA FTE++E+F   SEKLKL W+EFGGGE  R +                   E
Subjt:  ---------------VKPNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAEG------------------E

Query:  ELSNKEFERRIDAFIARELRFRWEESGAVVL
        ELSN EF+RRIDAFIARELRFRWEESGAVVL
Subjt:  ELSNKEFERRIDAFIARELRFRWEESGAVVL

A0A6J1GFJ2 uncharacterized protein LOC1114534612.7e-6766.81Show/hide
Query:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS--------------------------------------------
        MKTEEVEAMGLSDHLRTLLKF R TEVFAAMAFLVWTFSRLPLILRVSSDYISQIS                                            
Subjt:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS--------------------------------------------

Query:  -VK-------------PNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAE------------------GEE
         VK             PNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDF SGSEKLKLAWSEFGGGEFGRAE                  GEE
Subjt:  -VK-------------PNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAE------------------GEE

Query:  LSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG
        LSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG
Subjt:  LSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG

A0A6J1IPH9 uncharacterized protein LOC1114776441.0e-6665.55Show/hide
Query:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS--------------------------------------------
        MKTEEVEAMGLSDHLRTLLKFFR TEVFAAMA LVWTFSRLPLILRVSSDYISQIS                                            
Subjt:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS--------------------------------------------

Query:  --------------VKPNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAE------------------GEE
                       +PNGRLCSD+ELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEF RAE                  GEE
Subjt:  --------------VKPNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWSEFGGGEFGRAE------------------GEE

Query:  LSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG
        LSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG
Subjt:  LSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G66440.1 unknown protein4.2e-0432.14Show/hide
Query:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS
        +K E+ +A+   +    + +FFR  EV  A+ F+ WTFS+LP ++++S  ++ +I+
Subjt:  MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACAGAGGAAGTTGAAGCAATGGGACTCTCCGATCATCTCCGTACCTTACTGAAGTTTTTCCGGCTTACAGAGGTTTTTGCTGCGATGGCATTTCTCGTTTGGAC
GTTTAGTCGCCTCCCTTTGATTCTCAGAGTTTCGAGCGATTACATTTCTCAAATCTCCGTGAAGCCGAATGGGCGGCTCTGCTCTGACCTAGAGCTTGAGGAGATTGCGT
ACGAGGACAAAGAGGTAATTTCAGAGGTGAGCTCAACAACGGCAGCGGCCTTCACTGAAGAAATAGAGGATTTCAGTTCGGGATCGGAGAAATTGAAGCTAGCATGGAGC
GAATTCGGTGGAGGAGAGTTCGGGCGAGCAGAGGGGGAGGAGCTGAGCAATAAGGAGTTTGAGCGAAGGATCGACGCGTTCATTGCACGAGAGTTGAGGTTTCGCTGGGA
AGAATCCGGCGCCGTCGTCCTCCCAACTGGAAGTTGCCTCCGAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAACAGAGGAAGTTGAAGCAATGGGACTCTCCGATCATCTCCGTACCTTACTGAAGTTTTTCCGGCTTACAGAGGTTTTTGCTGCGATGGCATTTCTCGTTTGGAC
GTTTAGTCGCCTCCCTTTGATTCTCAGAGTTTCGAGCGATTACATTTCTCAAATCTCCGTGAAGCCGAATGGGCGGCTCTGCTCTGACCTAGAGCTTGAGGAGATTGCGT
ACGAGGACAAAGAGGTAATTTCAGAGGTGAGCTCAACAACGGCAGCGGCCTTCACTGAAGAAATAGAGGATTTCAGTTCGGGATCGGAGAAATTGAAGCTAGCATGGAGC
GAATTCGGTGGAGGAGAGTTCGGGCGAGCAGAGGGGGAGGAGCTGAGCAATAAGGAGTTTGAGCGAAGGATCGACGCGTTCATTGCACGAGAGTTGAGGTTTCGCTGGGA
AGAATCCGGCGCCGTCGTCCTCCCAACTGGAAGTTGCCTCCGAGGTTAA
Protein sequenceShow/hide protein sequence
MKTEEVEAMGLSDHLRTLLKFFRLTEVFAAMAFLVWTFSRLPLILRVSSDYISQISVKPNGRLCSDLELEEIAYEDKEVISEVSSTTAAAFTEEIEDFSSGSEKLKLAWS
EFGGGEFGRAEGEELSNKEFERRIDAFIARELRFRWEESGAVVLPTGSCLRG