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Carg28215 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28215
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein NRT1/ PTR FAMILY 6.3-like
Genome locationCarg_Chr15:8095314..8097901
RNA-Seq ExpressionCarg28215
SyntenyCarg28215
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579420.1 Protein NRT1/ PTR FAMILY 6.3, partial [Cucurbita argyrosperma subsp. sororia]3.1e-07100Show/hide
Query:  MSILPETTHEKTLSDAWDYTGKPAIKAKTG
        MSILPETTHEKTLSDAWDYTGKPAIKAKTG
Subjt:  MSILPETTHEKTLSDAWDYTGKPAIKAKTG

KAG7016896.1 hypothetical protein SDJN02_22007, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-127100Show/hide
Query:  MSILPETTHEKTLSDAWDYTGKPAIKAKTGCNSFNHLHHNSKSPAAKMFTGALTNSMHSGGQQAAGNSPHSTILNGTRTGGLKNRAFRGSPIGLRNWSVA
        MSILPETTHEKTLSDAWDYTGKPAIKAKTGCNSFNHLHHNSKSPAAKMFTGALTNSMHSGGQQAAGNSPHSTILNGTRTGGLKNRAFRGSPIGLRNWSVA
Subjt:  MSILPETTHEKTLSDAWDYTGKPAIKAKTGCNSFNHLHHNSKSPAAKMFTGALTNSMHSGGQQAAGNSPHSTILNGTRTGGLKNRAFRGSPIGLRNWSVA

Query:  YDNRAVFVAAWRKRGWNLPSIPGVVTIGRVDGAGKKKAESLAAARFSFWIGSIKDEEIGWMVVTSGFINPKSIEEPYIDEHWKIISNSGALPHAFLVASI
        YDNRAVFVAAWRKRGWNLPSIPGVVTIGRVDGAGKKKAESLAAARFSFWIGSIKDEEIGWMVVTSGFINPKSIEEPYIDEHWKIISNSGALPHAFLVASI
Subjt:  YDNRAVFVAAWRKRGWNLPSIPGVVTIGRVDGAGKKKAESLAAARFSFWIGSIKDEEIGWMVVTSGFINPKSIEEPYIDEHWKIISNSGALPHAFLVASI

Query:  LVYRLDHTTNFIANSINDLKEAHKG
        LVYRLDHTTNFIANSINDLKEAHKG
Subjt:  LVYRLDHTTNFIANSINDLKEAHKG

KAG7016898.1 Protein NRT1/ PTR FAMILY 6.3, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-07100Show/hide
Query:  MSILPETTHEKTLSDAWDYTGKPAIKAKTG
        MSILPETTHEKTLSDAWDYTGKPAIKAKTG
Subjt:  MSILPETTHEKTLSDAWDYTGKPAIKAKTG

XP_022922301.1 protein NRT1/ PTR FAMILY 6.3-like [Cucurbita moschata]3.1e-07100Show/hide
Query:  MSILPETTHEKTLSDAWDYTGKPAIKAKTG
        MSILPETTHEKTLSDAWDYTGKPAIKAKTG
Subjt:  MSILPETTHEKTLSDAWDYTGKPAIKAKTG

XP_023550325.1 protein NRT1/ PTR FAMILY 6.3-like [Cucurbita pepo subsp. pepo]3.1e-07100Show/hide
Query:  MSILPETTHEKTLSDAWDYTGKPAIKAKTG
        MSILPETTHEKTLSDAWDYTGKPAIKAKTG
Subjt:  MSILPETTHEKTLSDAWDYTGKPAIKAKTG

TrEMBL top hitse value%identityAlignment
A0A0A0KMV3 Uncharacterized protein1.2e-0486.21Show/hide
Query:  SILPETTHEKTLSDAWDYTGKPAIKAKTG
        S+LPET  EKTL DAWDYTGKPAIKAKTG
Subjt:  SILPETTHEKTLSDAWDYTGKPAIKAKTG

A0A1S3ATS1 LOW QUALITY PROTEIN: protein NRT1/ PTR FAMILY 6.3-like2.6e-0482.76Show/hide
Query:  SILPETTHEKTLSDAWDYTGKPAIKAKTG
        S+LPET  EKTL DAWDYTGKPAIK+KTG
Subjt:  SILPETTHEKTLSDAWDYTGKPAIKAKTG

A0A5A7T897 Protein NRT1/ PTR FAMILY 6.3-like2.6e-0482.76Show/hide
Query:  SILPETTHEKTLSDAWDYTGKPAIKAKTG
        S+LPET  EKTL DAWDYTGKPAIK+KTG
Subjt:  SILPETTHEKTLSDAWDYTGKPAIKAKTG

A0A6J1E3S2 protein NRT1/ PTR FAMILY 6.3-like1.5e-07100Show/hide
Query:  MSILPETTHEKTLSDAWDYTGKPAIKAKTG
        MSILPETTHEKTLSDAWDYTGKPAIKAKTG
Subjt:  MSILPETTHEKTLSDAWDYTGKPAIKAKTG

A0A6J1I186 protein NRT1/ PTR FAMILY 6.3-like7.4e-0793.33Show/hide
Query:  MSILPETTHEKTLSDAWDYTGKPAIKAKTG
        MSILP+TTHEKT+SDAWDYTGKPAIKAKTG
Subjt:  MSILPETTHEKTLSDAWDYTGKPAIKAKTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATTCTCCCAGAAACAACTCATGAAAAAACCCTCTCAGATGCCTGGGACTACACCGGCAAGCCTGCCATTAAGGCCAAAACCGGGTGTAACTCTTTTAACCATCT
CCACCATAATTCCAAGTCTCCGGCCGCCAAAATGTTCACCGGGGCTCTCACCAACTCCATGCATTCCGGCGGACAGCAAGCAGCTGGCAATTCTCCACACAGCACTATAC
TTAACGGCACTCGCACCGGTGGCCTTAAAAATCGAGCGTTTCGGGGATCGCCGATCGGTTTAAGAAATTGGTCGGTAGCGTATGACAATCGCGCCGTGTTCGTTGCAGCA
TGGAGGAAGAGAGGTTGGAATTTGCCCTCGATCCCTGGCGTTGTAACAATCGGACGCGTCGATGGAGCTGGGAAGAAGAAAGCAGAAAGTTTGGCCGCAGCAAGGTTCAG
TTTTTGGATAGGCAGCATCAAGGATGAAGAAATAGGTTGGATGGTTGTAACAAGTGGATTTATCAACCCTAAAAGCATTGAGGAACCATATATTGACGAACATTGGAAAA
TCATTTCAAATTCCGGAGCGCTTCCTCATGCCTTCTTAGTTGCTAGCATCCTCGTATACCGTCTCGATCATACGACCAACTTCATCGCCAATAGCATCAACGATTTGAAG
GAAGCCCACAAGGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATTCTCCCAGAAACAACTCATGAAAAAACCCTCTCAGATGCCTGGGACTACACCGGCAAGCCTGCCATTAAGGCCAAAACCGGGTGTAACTCTTTTAACCATCT
CCACCATAATTCCAAGTCTCCGGCCGCCAAAATGTTCACCGGGGCTCTCACCAACTCCATGCATTCCGGCGGACAGCAAGCAGCTGGCAATTCTCCACACAGCACTATAC
TTAACGGCACTCGCACCGGTGGCCTTAAAAATCGAGCGTTTCGGGGATCGCCGATCGGTTTAAGAAATTGGTCGGTAGCGTATGACAATCGCGCCGTGTTCGTTGCAGCA
TGGAGGAAGAGAGGTTGGAATTTGCCCTCGATCCCTGGCGTTGTAACAATCGGACGCGTCGATGGAGCTGGGAAGAAGAAAGCAGAAAGTTTGGCCGCAGCAAGGTTCAG
TTTTTGGATAGGCAGCATCAAGGATGAAGAAATAGGTTGGATGGTTGTAACAAGTGGATTTATCAACCCTAAAAGCATTGAGGAACCATATATTGACGAACATTGGAAAA
TCATTTCAAATTCCGGAGCGCTTCCTCATGCCTTCTTAGTTGCTAGCATCCTCGTATACCGTCTCGATCATACGACCAACTTCATCGCCAATAGCATCAACGATTTGAAG
GAAGCCCACAAGGGCTAA
Protein sequenceShow/hide protein sequence
MSILPETTHEKTLSDAWDYTGKPAIKAKTGCNSFNHLHHNSKSPAAKMFTGALTNSMHSGGQQAAGNSPHSTILNGTRTGGLKNRAFRGSPIGLRNWSVAYDNRAVFVAA
WRKRGWNLPSIPGVVTIGRVDGAGKKKAESLAAARFSFWIGSIKDEEIGWMVVTSGFINPKSIEEPYIDEHWKIISNSGALPHAFLVASILVYRLDHTTNFIANSINDLK
EAHKG