; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg28228 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28228
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function, DUF584
Genome locationCarg_Chr12:6885848..6886330
RNA-Seq ExpressionCarg28228
SyntenyCarg28228
Gene Ontology termsNA
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586019.1 hypothetical protein SDJN03_18752, partial [Cucurbita argyrosperma subsp. sororia]9.0e-86100Show/hide
Query:  MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGGGVSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIENRRDRFE
        MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGGGVSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIENRRDRFE
Subjt:  MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGGGVSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIENRRDRFE

Query:  EEANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
        EEANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
Subjt:  EEANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED

XP_022938325.1 uncharacterized protein LOC111444460 [Cucurbita moschata]5.8e-8599.38Show/hide
Query:  MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGGGVSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIENRRDRFE
        MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGGGVSKTRISK ISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIENRRDRFE
Subjt:  MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGGGVSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIENRRDRFE

Query:  EEANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
        EEANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
Subjt:  EEANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED

XP_022969594.1 uncharacterized protein LOC111468572 [Cucurbita maxima]2.5e-8095.06Show/hide
Query:  MATGKSYFSRSKFRFLPASEVPNHR--TGCGDFVFEIDESDLFNSPRGGGVSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIENRRDR
        MATGKSY SRSKFRFLPASEVPNHR  TGCGDFVFEIDESDLFNSPRG GVSKTRISKRISAKVVDA DGSVTT AALPVNIPDWSKILRNEYIENRRDR
Subjt:  MATGKSYFSRSKFRFLPASEVPNHR--TGCGDFVFEIDESDLFNSPRGGGVSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIENRRDR

Query:  FEEEANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
        FEEEANCGDELE DRFR+PPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
Subjt:  FEEEANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED

XP_023536989.1 uncharacterized protein LOC111798210 [Cucurbita pepo subsp. pepo]8.7e-6594.81Show/hide
Query:  TGCGDFVFEIDESDLFNSPRGGGVSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIENRRDRFEEEANCGDELENDRFRVPPHEFVART
        TG   FVFEIDESDLFNS RGGGVSK RISKRISAKVVDAGDGSVTT AALPVNIPDWSKILRNEYIENRRDRFEEEANCGDELE+DRFRVPPHEFVART
Subjt:  TGCGDFVFEIDESDLFNSPRGGGVSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIENRRDRFEEEANCGDELENDRFRVPPHEFVART

Query:  RMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
        RMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
Subjt:  RMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED

XP_038894808.1 uncharacterized protein LOC120083221 [Benincasa hispida]1.3e-5571.26Show/hide
Query:  MATGKSYFSRSKFRFLPASEVPNHRTGC-GDFVFEIDESDLFNSPRGG-------GVSKTRISKRISAKVVDAGDGSVTTV--AALPVNIPDWSKILRNE
        MATG+SYFSRSKFRFLPA + P+H   C GD VF+ DESDLFNSP  G         +KTRISKRIS  VVDAGD +VTTV  A+LPVNIPDWSKILRNE
Subjt:  MATGKSYFSRSKFRFLPASEVPNHRTGC-GDFVFEIDESDLFNSPRGG-------GVSKTRISKRISAKVVDAGDGSVTTV--AALPVNIPDWSKILRNE

Query:  YIENRRDRF----EEEANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
        YIENRRD F    +E+ + GD+ E  RFRVPPHEF+A+TR+ASFSV EGIGRTLKGRDLSRVRDAIW KTGFED
Subjt:  YIENRRDRF----EEEANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED

TrEMBL top hitse value%identityAlignment
A0A0A0LSF7 Uncharacterized protein2.8e-5370.18Show/hide
Query:  MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGG-------GVSKTRISKRISAKVVDAGDGSVTTV--AALPVNIPDWSKILRNEY
        MATGKSYFSRSKFRFL   + P+H     D  F+ DESDLFNSP  G         SK+RISKRIS   VD GD SVTTV  A+LPVNIPDWSKILRNEY
Subjt:  MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGG-------GVSKTRISKRISAKVVDAGDGSVTTV--AALPVNIPDWSKILRNEY

Query:  IENRRDRFEEE--ANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
        I+NRRD FE+E   + GDE+E  RFRVPPHEF+A+TR+ASFSV EGIGRTLKGRDLSRVRDAIW KTGFED
Subjt:  IENRRDRFEEE--ANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED

A0A1S3CH53 uncharacterized protein LOC1035008468.8e-5572.09Show/hide
Query:  MATGKSYFSRSKFRFLPASEVPNHRTGC-GDFVFEIDESDLFNSPRGG-------GVSKTRISKRISAKVVDAGDGSVTTV--AALPVNIPDWSKILRNE
        MATGKSYFSRSKFRFLPA + P+H   C  D  F+ DESDLFNSP  G         SK+RISKRIS   VD GD SVTTV  A+LPVNIPDWSKILRNE
Subjt:  MATGKSYFSRSKFRFLPASEVPNHRTGC-GDFVFEIDESDLFNSPRGG-------GVSKTRISKRISAKVVDAGDGSVTTV--AALPVNIPDWSKILRNE

Query:  YIENRRDRFEEE--ANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
        YIENRRD FE+E   + GDE E  RFRVPPHEF+A+TR+ASFSV EGIGRTLKGRDLSRVRDAIW KTGFED
Subjt:  YIENRRDRFEEE--ANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED

A0A6J1FJG2 uncharacterized protein LOC1114444602.8e-8599.38Show/hide
Query:  MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGGGVSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIENRRDRFE
        MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGGGVSKTRISK ISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIENRRDRFE
Subjt:  MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGGGVSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIENRRDRFE

Query:  EEANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
        EEANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
Subjt:  EEANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED

A0A6J1I330 uncharacterized protein LOC1114685721.2e-8095.06Show/hide
Query:  MATGKSYFSRSKFRFLPASEVPNHR--TGCGDFVFEIDESDLFNSPRGGGVSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIENRRDR
        MATGKSY SRSKFRFLPASEVPNHR  TGCGDFVFEIDESDLFNSPRG GVSKTRISKRISAKVVDA DGSVTT AALPVNIPDWSKILRNEYIENRRDR
Subjt:  MATGKSYFSRSKFRFLPASEVPNHR--TGCGDFVFEIDESDLFNSPRGGGVSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIENRRDR

Query:  FEEEANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
        FEEEANCGDELE DRFR+PPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
Subjt:  FEEEANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED

A0A6J1I3L6 uncharacterized protein LOC1114693362.4e-5267.23Show/hide
Query:  MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGG-------GVSKTRISKRISAKVVDAGDGSVTTV--AALPVNIPDWSKILRNEY
        MATG +YFSRSKFRFLP ++ P+HR    D VFE+DESDLFNSPR          VSK+RISKRISA  VD  D SV TV  A+LPVNIPDWSKILRNEY
Subjt:  MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGG-------GVSKTRISKRISAKVVDAGDGSVTTV--AALPVNIPDWSKILRNEY

Query:  IENRRDRFEEEANCGDE--------LENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
        IENRRD F+++ +  DE         E+ RFRVPPHEF+A+TR+ASFSV EG+GRTLKGRDLSRVRDAIW KTGFED
Subjt:  IENRRDRFEEEANCGDE--------LENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G28400.1 Protein of unknown function, DUF5841.0e-2645.56Show/hide
Query:  MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGGGVSKTRISKRISA------KVVDAGDGSVTTVAALPVNIPDWSKILRNEYIEN
        MAT K Y+ R   RF    +   H T   D  FE+DE DLFN+      S +     I++      + +  G  S    ++LPVN+PDWSKIL +E    
Subjt:  MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGGGVSKTRISKRISA------KVVDAGDGSVTTVAALPVNIPDWSKILRNEYIEN

Query:  RRDRFEEEANCGDEL---ENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
        R+   EEE + GDE+   E  R RVPPHE +A  RMASFSV EG GRTLKGRDLSRVR+ I+   G ED
Subjt:  RRDRFEEEANCGDEL---ENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED

AT3G45210.1 Protein of unknown function, DUF5843.8e-2645.91Show/hide
Query:  ATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGGGVSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIENRRDRFEE
        AT KSY+ R   RFLP     N     GD  FE DESDL+ S R       R     + K   A   + T  ++LP+N+ +WSKIL  E     R   E 
Subjt:  ATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGGGVSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIENRRDRFEE

Query:  EANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
        + + G+       ++PPHE++A+TRMASFSV EGIGRTLKGRD+SRVR+AI  KTGF D
Subjt:  EANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED

AT4G04630.1 Protein of unknown function, DUF5843.2e-1747.19Show/hide
Query:  AALPVNIPDWSKILRNEYIENRRDRFEEEANCGDELENDRFRVPPHEFV----ARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGF
        ++ P+N+PDWSK+  +     R       A   D+ ++D   VPPHE+V    ART+++SFS+ EG+GRTLKGRDLS+VR+A+  KTGF
Subjt:  AALPVNIPDWSKILRNEYIENRRDRFEEEANCGDELENDRFRVPPHEFV----ARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGF

AT5G03230.1 Protein of unknown function, DUF5841.5e-2539.43Show/hide
Query:  MATGKSYFSRSKFRF-LPASEVPNHRTGCGDFVFEIDESDL-----------FNSPRGGGVSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILR
        MA+ K +F + K+ +  P  E+ +        VFE DESD+           F++ R   +S+ R   R   K  D+G+  +T   +LPVNIPDWSKIL+
Subjt:  MATGKSYFSRSKFRF-LPASEVPNHRTGCGDFVFEIDESDL-----------FNSPRGGGVSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILR

Query:  NEYIENR---RDRFEEEANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
        +EY  +     D  +++ +  D  +  R  +PPHE++AR R +SF+V EGIG T KGRDL R+R+AIW K GF+D
Subjt:  NEYIENR---RDRFEEEANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED

AT5G60680.1 Protein of unknown function, DUF5841.0e-3449.1Show/hide
Query:  MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGGG-------VSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIE
        MATGKSY++R  +RFL  ++ P++ T   D   E DESDLFN              S  R  K+ S +   +   S    ++LPVN+PDWSKILR EY +
Subjt:  MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGGG-------VSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIE

Query:  NRRDRFEEEANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED
        NRR   E+  +  D+ E+    +PPHEF+A+TRMASFSV EG+GRTLKGRDLSRVR+AI+ K GF+D
Subjt:  NRRDRFEEEANCGDELENDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGGTAAGAGCTATTTCTCTCGCTCCAAGTTCCGCTTTCTTCCCGCTAGCGAAGTACCCAACCACCGTACCGGCTGCGGCGACTTCGTCTTCGAAATCGACGA
ATCCGACCTCTTCAACTCCCCGCGCGGCGGCGGAGTTTCCAAAACGCGAATCTCCAAGCGGATATCGGCGAAGGTAGTGGACGCTGGAGACGGAAGCGTAACGACAGTGG
CGGCGTTGCCGGTTAACATCCCGGACTGGTCGAAGATCCTGAGAAACGAGTACATCGAGAATCGGAGAGATAGGTTCGAGGAAGAGGCGAACTGCGGCGATGAGTTGGAG
AACGATCGATTTAGGGTTCCGCCGCACGAGTTTGTGGCGAGGACGAGGATGGCGTCGTTTTCCGTTGAGGAAGGGATTGGAAGAACGTTGAAAGGGAGAGATCTGAGTAG
AGTTCGAGATGCGATTTGGCTAAAAACTGGATTCGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACTGGTAAGAGCTATTTCTCTCGCTCCAAGTTCCGCTTTCTTCCCGCTAGCGAAGTACCCAACCACCGTACCGGCTGCGGCGACTTCGTCTTCGAAATCGACGA
ATCCGACCTCTTCAACTCCCCGCGCGGCGGCGGAGTTTCCAAAACGCGAATCTCCAAGCGGATATCGGCGAAGGTAGTGGACGCTGGAGACGGAAGCGTAACGACAGTGG
CGGCGTTGCCGGTTAACATCCCGGACTGGTCGAAGATCCTGAGAAACGAGTACATCGAGAATCGGAGAGATAGGTTCGAGGAAGAGGCGAACTGCGGCGATGAGTTGGAG
AACGATCGATTTAGGGTTCCGCCGCACGAGTTTGTGGCGAGGACGAGGATGGCGTCGTTTTCCGTTGAGGAAGGGATTGGAAGAACGTTGAAAGGGAGAGATCTGAGTAG
AGTTCGAGATGCGATTTGGCTAAAAACTGGATTCGAAGATTGA
Protein sequenceShow/hide protein sequence
MATGKSYFSRSKFRFLPASEVPNHRTGCGDFVFEIDESDLFNSPRGGGVSKTRISKRISAKVVDAGDGSVTTVAALPVNIPDWSKILRNEYIENRRDRFEEEANCGDELE
NDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED