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Carg28238 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28238
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontwo-component response regulator ORR26-like
Genome locationCarg_Chr04:16037805..16038563
RNA-Seq ExpressionCarg28238
SyntenyCarg28238
Gene Ontology termsGO:0000160 - phosphorelay signal transduction system (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032530.1 hypothetical protein SDJN02_06579 [Cucurbita argyrosperma subsp. argyrosperma]5.1e-133100Show/hide
Query:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQKQQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLRMLDHNFQHVA
        MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQKQQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLRMLDHNFQHVA
Subjt:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQKQQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLRMLDHNFQHVA

Query:  SNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLLNVLEDDPPDF
        SNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLLNVLEDDPPDF
Subjt:  SNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLLNVLEDDPPDF

Query:  GSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEINQ
        GSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEINQ
Subjt:  GSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEINQ

XP_022952584.1 putative two-component response regulator-like APRR6 isoform X1 [Cucurbita moschata]1.4e-10682.21Show/hide
Query:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLR
        +++GRKNKL P MEASKF+ SV TQLPP VQ+          QQNHEANKSTQQNHETNKST GGSTSLSGGKRFRLIAPKP  NPRLLVSANFVNHGLR
Subjt:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLR

Query:  MLDHNFQHVASNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLL
        MLDHNFQHVASNYNSVPY+INKTTP+VTS R FDEIQF DIHQ D AQQLEAMEF GTSEGIQLMSKNIALP STNLDN+AANF NEG QQQ AEYDYLL
Subjt:  MLDHNFQHVASNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLL

Query:  NVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEIN
        NVLEDDP DF +DF LSDVDKYSEWLRNTILE+ SG DSFIND AENF VEIN
Subjt:  NVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEIN

XP_022952593.1 putative two-component response regulator-like APRR6 isoform X2 [Cucurbita moschata]1.4e-10682.21Show/hide
Query:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLR
        +++GRKNKL P MEASKF+ SV TQLPP VQ+          QQNHEANKSTQQNHETNKST GGSTSLSGGKRFRLIAPKP  NPRLLVSANFVNHGLR
Subjt:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLR

Query:  MLDHNFQHVASNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLL
        MLDHNFQHVASNYNSVPY+INKTTP+VTS R FDEIQF DIHQ D AQQLEAMEF GTSEGIQLMSKNIALP STNLDN+AANF NEG QQQ AEYDYLL
Subjt:  MLDHNFQHVASNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLL

Query:  NVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEIN
        NVLEDDP DF +DF LSDVDKYSEWLRNTILE+ SG DSFIND AENF VEIN
Subjt:  NVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEIN

XP_022952602.1 putative two-component response regulator-like APRR6 isoform X3 [Cucurbita moschata]1.4e-10682.21Show/hide
Query:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLR
        +++GRKNKL P MEASKF+ SV TQLPP VQ+          QQNHEANKSTQQNHETNKST GGSTSLSGGKRFRLIAPKP  NPRLLVSANFVNHGLR
Subjt:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLR

Query:  MLDHNFQHVASNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLL
        MLDHNFQHVASNYNSVPY+INKTTP+VTS R FDEIQF DIHQ D AQQLEAMEF GTSEGIQLMSKNIALP STNLDN+AANF NEG QQQ AEYDYLL
Subjt:  MLDHNFQHVASNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLL

Query:  NVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEIN
        NVLEDDP DF +DF LSDVDKYSEWLRNTILE+ SG DSFIND AENF VEIN
Subjt:  NVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEIN

XP_022990810.1 two-component response regulator ORR26-like [Cucurbita maxima]7.5e-10881.89Show/hide
Query:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLR
        +K+G+KNKL P MEASKF+ SV+TQLPPLV +          QQNHEANKSTQQNHE NKST GGSTSLSGGKRFRLIAPKP  NPRLLVSANFVNHGLR
Subjt:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLR

Query:  MLDHNFQHVASNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLL
        MLDHNFQHVASNYNSVPYSINKTTP+VTS R FDEIQF D+HQ DVAQQLEAMEF GTSEGIQLMSKNIALPDSTNLDN+AANF NEGSQQQ AEYDYLL
Subjt:  MLDHNFQHVASNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLL

Query:  NVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEINQ
        NVLEDDP D  +DF LSDVDKYSEWLRNT+LENGS  DS INDN ENF V+INQ
Subjt:  NVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEINQ

TrEMBL top hitse value%identityAlignment
A0A6J1GKU9 putative two-component response regulator-like APRR6 isoform X36.8e-10782.21Show/hide
Query:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLR
        +++GRKNKL P MEASKF+ SV TQLPP VQ+          QQNHEANKSTQQNHETNKST GGSTSLSGGKRFRLIAPKP  NPRLLVSANFVNHGLR
Subjt:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLR

Query:  MLDHNFQHVASNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLL
        MLDHNFQHVASNYNSVPY+INKTTP+VTS R FDEIQF DIHQ D AQQLEAMEF GTSEGIQLMSKNIALP STNLDN+AANF NEG QQQ AEYDYLL
Subjt:  MLDHNFQHVASNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLL

Query:  NVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEIN
        NVLEDDP DF +DF LSDVDKYSEWLRNTILE+ SG DSFIND AENF VEIN
Subjt:  NVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEIN

A0A6J1GL19 putative two-component response regulator-like APRR6 isoform X26.8e-10782.21Show/hide
Query:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLR
        +++GRKNKL P MEASKF+ SV TQLPP VQ+          QQNHEANKSTQQNHETNKST GGSTSLSGGKRFRLIAPKP  NPRLLVSANFVNHGLR
Subjt:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLR

Query:  MLDHNFQHVASNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLL
        MLDHNFQHVASNYNSVPY+INKTTP+VTS R FDEIQF DIHQ D AQQLEAMEF GTSEGIQLMSKNIALP STNLDN+AANF NEG QQQ AEYDYLL
Subjt:  MLDHNFQHVASNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLL

Query:  NVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEIN
        NVLEDDP DF +DF LSDVDKYSEWLRNTILE+ SG DSFIND AENF VEIN
Subjt:  NVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEIN

A0A6J1GM46 putative two-component response regulator-like APRR6 isoform X16.8e-10782.21Show/hide
Query:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLR
        +++GRKNKL P MEASKF+ SV TQLPP VQ+          QQNHEANKSTQQNHETNKST GGSTSLSGGKRFRLIAPKP  NPRLLVSANFVNHGLR
Subjt:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLR

Query:  MLDHNFQHVASNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLL
        MLDHNFQHVASNYNSVPY+INKTTP+VTS R FDEIQF DIHQ D AQQLEAMEF GTSEGIQLMSKNIALP STNLDN+AANF NEG QQQ AEYDYLL
Subjt:  MLDHNFQHVASNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLL

Query:  NVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEIN
        NVLEDDP DF +DF LSDVDKYSEWLRNTILE+ SG DSFIND AENF VEIN
Subjt:  NVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEIN

A0A6J1GRD9 two-component response regulator ORR26-like isoform X14.9e-8167.46Show/hide
Query:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQKQQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLRMLDHNFQHVA
        MK+GR+NKL P  E SKFNFSVRTQLPP +  +Q H+         E N ST GGSTS  GG+RFRLIAP+PVPNP L VSANF NHGL MLD NF+HV 
Subjt:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQKQQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLRMLDHNFQHVA

Query:  SNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQ---------LEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLLN
        SNY SVPY IN+TTP+VTSS VFD  QFSD +  DV QQ          EAME +GTSEGIQLMS N+A P STNLDN+AANF NEGSQQQ AEYDYLLN
Subjt:  SNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQ---------LEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLLN

Query:  VLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEIN
         LEDDP DF SD +LSDVDKYSEWL+NT+LEN SGPDSF+ DN ENF +  N
Subjt:  VLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEIN

A0A6J1JR42 two-component response regulator ORR26-like3.6e-10881.89Show/hide
Query:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLR
        +K+G+KNKL P MEASKF+ SV+TQLPPLV +          QQNHEANKSTQQNHE NKST GGSTSLSGGKRFRLIAPKP  NPRLLVSANFVNHGLR
Subjt:  MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQK----------QQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLR

Query:  MLDHNFQHVASNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLL
        MLDHNFQHVASNYNSVPYSINKTTP+VTS R FDEIQF D+HQ DVAQQLEAMEF GTSEGIQLMSKNIALPDSTNLDN+AANF NEGSQQQ AEYDYLL
Subjt:  MLDHNFQHVASNYNSVPYSINKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLL

Query:  NVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEINQ
        NVLEDDP D  +DF LSDVDKYSEWLRNT+LENGS  DS INDN ENF V+INQ
Subjt:  NVLEDDPPDFGSDFDLSDVDKYSEWLRNTILENGSGPDSFINDNAENFQVEINQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGGGGGAGAAAAAATAAATTAGTTCCATGGATGGAAGCATCCAAATTCAATTTCTCAGTCCGGACTCAACTTCCTCCGTTGGTGCAAAAGCAGCAGAATCATGA
GGCAAACAAATCTACACAGCAGAATCATGAGACAAACAAATCTACACACGGAGGTTCAACCTCTCTTTCAGGAGGGAAAAGATTCCGACTTATTGCTCCTAAGCCTGTGC
CTAATCCTAGACTGCTTGTTAGCGCCAACTTTGTAAATCATGGTCTCAGAATGCTTGACCACAATTTTCAGCATGTTGCTTCAAACTACAATTCAGTTCCATATAGCATC
AATAAGACGACTCCAAAGGTAACTTCTTCTCGTGTATTTGATGAAATTCAGTTCTCAGATATACATCAAGCTGATGTAGCTCAGCAGCTAGAAGCAATGGAATTTAGTGG
CACATCAGAAGGGATTCAGTTGATGTCAAAGAACATTGCTTTACCTGATTCAACCAACTTGGACAATGTTGCTGCAAATTTTGTAAATGAAGGAAGCCAACAACAATTAG
CAGAATATGATTATCTCTTAAATGTTTTAGAAGACGATCCACCCGACTTTGGCAGCGACTTTGATCTGAGTGATGTAGATAAATACAGCGAGTGGCTAAGGAACACTATT
CTGGAAAACGGAAGCGGTCCAGATAGCTTTATCAATGACAATGCAGAAAACTTTCAAGTTGAAATCAATCAATAA
mRNA sequenceShow/hide mRNA sequence
AAATACAAAGCACAAGTAGAGTCCATGAAAAGGGGGAGAAAAAATAAATTAGTTCCATGGATGGAAGCATCCAAATTCAATTTCTCAGTCCGGACTCAACTTCCTCCGTT
GGTGCAAAAGCAGCAGAATCATGAGGCAAACAAATCTACACAGCAGAATCATGAGACAAACAAATCTACACACGGAGGTTCAACCTCTCTTTCAGGAGGGAAAAGATTCC
GACTTATTGCTCCTAAGCCTGTGCCTAATCCTAGACTGCTTGTTAGCGCCAACTTTGTAAATCATGGTCTCAGAATGCTTGACCACAATTTTCAGCATGTTGCTTCAAAC
TACAATTCAGTTCCATATAGCATCAATAAGACGACTCCAAAGGTAACTTCTTCTCGTGTATTTGATGAAATTCAGTTCTCAGATATACATCAAGCTGATGTAGCTCAGCA
GCTAGAAGCAATGGAATTTAGTGGCACATCAGAAGGGATTCAGTTGATGTCAAAGAACATTGCTTTACCTGATTCAACCAACTTGGACAATGTTGCTGCAAATTTTGTAA
ATGAAGGAAGCCAACAACAATTAGCAGAATATGATTATCTCTTAAATGTTTTAGAAGACGATCCACCCGACTTTGGCAGCGACTTTGATCTGAGTGATGTAGATAAATAC
AGCGAGTGGCTAAGGAACACTATTCTGGAAAACGGAAGCGGTCCAGATAGCTTTATCAATGACAATGCAGAAAACTTTCAAGTTGAAATCAATCAATAA
Protein sequenceShow/hide protein sequence
MKRGRKNKLVPWMEASKFNFSVRTQLPPLVQKQQNHEANKSTQQNHETNKSTHGGSTSLSGGKRFRLIAPKPVPNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSI
NKTTPKVTSSRVFDEIQFSDIHQADVAQQLEAMEFSGTSEGIQLMSKNIALPDSTNLDNVAANFVNEGSQQQLAEYDYLLNVLEDDPPDFGSDFDLSDVDKYSEWLRNTI
LENGSGPDSFINDNAENFQVEINQ