; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg28239 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28239
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontwo-component response regulator ORR26-like
Genome locationCarg_Chr04:16038658..16039556
RNA-Seq ExpressionCarg28239
SyntenyCarg28239
Gene Ontology termsGO:0000160 - phosphorelay signal transduction system (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032531.1 hypothetical protein SDJN02_06580, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-56100Show/hide
Query:  MANVSMPDMDSFSFLHVLLEMNIALSGSYVFSDELEGSYESIGRRSKPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVGRPKLILKLMNE
        MANVSMPDMDSFSFLHVLLEMNIALSGSYVFSDELEGSYESIGRRSKPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVGRPKLILKLMNE
Subjt:  MANVSMPDMDSFSFLHVLLEMNIALSGSYVFSDELEGSYESIGRRSKPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVGRPKLILKLMNE

Query:  PCLTLRQVANHLQ
        PCLTLRQVANHLQ
Subjt:  PCLTLRQVANHLQ

XP_022953944.1 two-component response regulator ORR26-like isoform X1 [Cucurbita moschata]3.0e-03100Show/hide
Query:  RPKLILKLMNEPCLTLRQVANHLQ
        RPKLILKLMNEPCLTLRQVANHLQ
Subjt:  RPKLILKLMNEPCLTLRQVANHLQ

XP_022953944.1 two-component response regulator ORR26-like isoform X1 [Cucurbita moschata]1.9e-2163.92Show/hide
Query:  MANVSMPDMDSFSFLHVLLEMNIALSGSYVFSD---ELEGSYESIGRRS-----KPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVG
        MANVSMPDMDSFSFLHVLL+MNIA+    +F      L+ + +++   +     KPVSKDDLKYVWQH+YR NINIAKLTH ANCV+KAKSG+E VG
Subjt:  MANVSMPDMDSFSFLHVLLEMNIALSGSYVFSD---ELEGSYESIGRRS-----KPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVG

XP_022953954.1 two-component response regulator ORR26-like isoform X2 [Cucurbita moschata]3.0e-03100Show/hide
Query:  RPKLILKLMNEPCLTLRQVANHLQ
        RPKLILKLMNEPCLTLRQVANHLQ
Subjt:  RPKLILKLMNEPCLTLRQVANHLQ

XP_022953954.1 two-component response regulator ORR26-like isoform X2 [Cucurbita moschata]1.7e-2268.82Show/hide
Query:  MANVSMPDMDSFSFLHVLLEMNI-ALSGSYVFSDELEGSYESIGR---RSKPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVG
        MANVSMPDMDSFSFLHVLLEMNI  +  S V + ++     + G      KP+SKDDLKYVWQH+YRRN NI+KLTH ANCVEKAKSGKESVG
Subjt:  MANVSMPDMDSFSFLHVLLEMNI-ALSGSYVFSDELEGSYESIGR---RSKPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVG

XP_022953971.1 putative two-component response regulator-like APRR6 isoform X2 [Cucurbita moschata]1.1e-2469.07Show/hide
Query:  MANVSMPDMDSFSFLHVLLEMNIALSGSYVFSD---ELEGSYESIGRRS-----KPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVG
        MANVSMPDMDSFSFLHVLLEMNIA+    +F      L+ + +++   +     KP+SKDDLKYVWQHMYRR+INIAKLTHIANCVEKAKSGKESVG
Subjt:  MANVSMPDMDSFSFLHVLLEMNIALSGSYVFSD---ELEGSYESIGRRS-----KPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVG

XP_022953971.1 putative two-component response regulator-like APRR6 isoform X2 [Cucurbita moschata]3.0e-03100Show/hide
Query:  RPKLILKLMNEPCLTLRQVANHLQ
        RPKLILKLMNEPCLTLRQVANHLQ
Subjt:  RPKLILKLMNEPCLTLRQVANHLQ

XP_022953971.1 putative two-component response regulator-like APRR6 isoform X2 [Cucurbita moschata]1.7e-2268.82Show/hide
Query:  MANVSMPDMDSFSFLHVLLEMNI-ALSGSYVFSDELEGSYESIGR---RSKPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVG
        MANVSMPDMDSFSFLHVLLEMNI  +  S V + ++     + G      KP+SKDDLKYVWQH+YRRN NI+KLTH ANCVEKAKSGKESVG
Subjt:  MANVSMPDMDSFSFLHVLLEMNI-ALSGSYVFSDELEGSYESIGR---RSKPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVG

XP_023538664.1 two-component response regulator ORR26-like isoform X1 [Cucurbita pepo subsp. pepo]2.3e-0339.56Show/hide
Query:  SDELEG-SYESIGRRSKPVSKDDLKYVWQHMYRRNINIAKLT--HIANCVEKAKSGKESVG------RPKLILKLMNEPCLTLRQVANHLQ
        +D++EG + E +   SKP + +  K    +   +   I++ T   I   +E+ +   +++       RPKLILKLMNEPCLTLRQVANHLQ
Subjt:  SDELEG-SYESIGRRSKPVSKDDLKYVWQHMYRRNINIAKLT--HIANCVEKAKSGKESVG------RPKLILKLMNEPCLTLRQVANHLQ

TrEMBL top hitse value%identityAlignment
A0A6J1GPL1 putative two-component response regulator-like APRR6 isoform X25.2e-2569.07Show/hide
Query:  MANVSMPDMDSFSFLHVLLEMNIALSGSYVFSD---ELEGSYESIGRRS-----KPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVG
        MANVSMPDMDSFSFLHVLLEMNIA+    +F      L+ + +++   +     KP+SKDDLKYVWQHMYRR+INIAKLTHIANCVEKAKSGKESVG
Subjt:  MANVSMPDMDSFSFLHVLLEMNIALSGSYVFSD---ELEGSYESIGRRS-----KPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVG

A0A6J1GPL1 putative two-component response regulator-like APRR6 isoform X21.5e-03100Show/hide
Query:  RPKLILKLMNEPCLTLRQVANHLQ
        RPKLILKLMNEPCLTLRQVANHLQ
Subjt:  RPKLILKLMNEPCLTLRQVANHLQ

A0A6J1GPL1 putative two-component response regulator-like APRR6 isoform X28.2e-2368.82Show/hide
Query:  MANVSMPDMDSFSFLHVLLEMNI-ALSGSYVFSDELEGSYESIGR---RSKPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVG
        MANVSMPDMDSFSFLHVLLEMNI  +  S V + ++     + G      KP+SKDDLKYVWQH+YRRN NI+KLTH ANCVEKAKSGKESVG
Subjt:  MANVSMPDMDSFSFLHVLLEMNI-ALSGSYVFSDELEGSYESIGR---RSKPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVG

A0A6J1GRD9 two-component response regulator ORR26-like isoform X11.5e-03100Show/hide
Query:  RPKLILKLMNEPCLTLRQVANHLQ
        RPKLILKLMNEPCLTLRQVANHLQ
Subjt:  RPKLILKLMNEPCLTLRQVANHLQ

A0A6J1GRD9 two-component response regulator ORR26-like isoform X18.2e-2368.82Show/hide
Query:  MANVSMPDMDSFSFLHVLLEMNI-ALSGSYVFSDELEGSYESIGR---RSKPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVG
        MANVSMPDMDSFSFLHVLLEMNI  +  S V + ++     + G      KP+SKDDLKYVWQH+YRRN NI+KLTH ANCVEKAKSGKESVG
Subjt:  MANVSMPDMDSFSFLHVLLEMNI-ALSGSYVFSDELEGSYESIGR---RSKPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVG

A0A6J1GRF3 two-component response regulator ORR26-like isoform X21.5e-03100Show/hide
Query:  RPKLILKLMNEPCLTLRQVANHLQ
        RPKLILKLMNEPCLTLRQVANHLQ
Subjt:  RPKLILKLMNEPCLTLRQVANHLQ

A0A6J1GRF3 two-component response regulator ORR26-like isoform X21.7e-2064.52Show/hide
Query:  MANVSMPDMDSFSFLHVLLEMNI-ALSGSYVFSDELEGSYESIGR---RSKPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVG
        MANVSMPDMDSFSFLHVLL+M I  +  S V + ++     + G      KP+SKDDLKYVWQH+YRRN NI+KL H ANCVEKAK GKESVG
Subjt:  MANVSMPDMDSFSFLHVLLEMNI-ALSGSYVFSDELEGSYESIGR---RSKPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVG

A0A6J1I817 putative two-component response regulator-like APRR62.1e-0295.83Show/hide
Query:  RPKLILKLMNEPCLTLRQVANHLQ
        RPKLILKLMNEP LTLRQVANHLQ
Subjt:  RPKLILKLMNEPCLTLRQVANHLQ

A0A6J1I817 putative two-component response regulator-like APRR62.9e-2035.24Show/hide
Query:  MANVSMPDMDSFSFLHVLLEMNIALSGSYVFSD---ELEGSYESIGRRS-----KPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVG---
        MANVSMPDMDSFS LHVLL+MNIA+    +F      L+ + +++   +     KP+SK+DLKYVWQH+YR NIN+AKLTH ANC+EKAKSG+E +    
Subjt:  MANVSMPDMDSFSFLHVLLEMNIALSGSYVFSD---ELEGSYESIGRRS-----KPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVG---

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---RPKLILKLMNEPCLTLRQVANHLQ
           RPKLILKLMNEPCLTLRQVANHLQ
Subjt:  ---RPKLILKLMNEPCLTLRQVANHLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68210.1 pseudo-response regulator 62.9e-0433.33Show/hide
Query:  MANVSMPDMDSFSFLHVLLEMNIALSGSYVFSDELEGSYES--IGRRS-----KPVSKDDLKYVWQHMYRRNINIAKLTHI
        +AN+ MP +DS SFL+ LL  +I L    + + E++    S  + +R+     KP+S DD+K +WQH++ +     K  +I
Subjt:  MANVSMPDMDSFSFLHVLLEMNIALSGSYVFSDELEGSYES--IGRRS-----KPVSKDDLKYVWQHMYRRNINIAKLTHI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAACGTTAGCATGCCTGATATGGACAGTTTTTCATTCTTGCACGTGCTCCTTGAGATGAATATTGCTTTGTCGGGCAGTTATGTCTTCAGCGATGAACTTGAAGG
TAGCTACGAAAGCATTGGCAGAAGGAGCAAACCTGTTTCTAAGGATGATCTAAAATATGTATGGCAACACATGTATCGGAGAAACATAAACATAGCCAAGCTAACACATA
TAGCAAATTGCGTAGAAAAAGCCAAATCTGGAAAAGAATCTGTCGGTCGCCCAAAACTTATACTTAAGTTGATGAATGAACCATGCTTGACGCTGCGCCAGGTAGCTAAT
CACCTACAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAACGTTAGCATGCCTGATATGGACAGTTTTTCATTCTTGCACGTGCTCCTTGAGATGAATATTGCTTTGTCGGGCAGTTATGTCTTCAGCGATGAACTTGAAGG
TAGCTACGAAAGCATTGGCAGAAGGAGCAAACCTGTTTCTAAGGATGATCTAAAATATGTATGGCAACACATGTATCGGAGAAACATAAACATAGCCAAGCTAACACATA
TAGCAAATTGCGTAGAAAAAGCCAAATCTGGAAAAGAATCTGTCGGTCGCCCAAAACTTATACTTAAGTTGATGAATGAACCATGCTTGACGCTGCGCCAGGTAGCTAAT
CACCTACAG
Protein sequenceShow/hide protein sequence
MANVSMPDMDSFSFLHVLLEMNIALSGSYVFSDELEGSYESIGRRSKPVSKDDLKYVWQHMYRRNINIAKLTHIANCVEKAKSGKESVGRPKLILKLMNEPCLTLRQVAN
HLQ