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Carg28251 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28251
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein GL2-INTERACTING REPRESSOR 2
Genome locationCarg_Chr13:4742809..4745029
RNA-Seq ExpressionCarg28251
SyntenyCarg28251
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2034830.1 hypothetical protein ES319_D04G111100v1 [Gossypium barbadense]5.3e-0543.84Show/hide
Query:  MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQASKK
        + P    +   S  +E  +  + +ATT+ MVL+GC +CLMYVM S+ D KCPKC +T LLD +++ A  AS K
Subjt:  MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQASKK
KAG6583700.1 hypothetical protein SDJN03_19632, partial [Cucurbita argyrosperma subsp. sororia]6.8e-37100Show/hide
Query:  MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLDVHNLANQASKKNLVDMSIDVAK
        MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLDVHNLANQASKKNLVDMSIDVAK
Subjt:  MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLDVHNLANQASKKNLVDMSIDVAK
KAG8501176.1 hypothetical protein CXB51_003272 [Gossypium anomalum]5.3e-0543.84Show/hide
Query:  MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQASKK
        + P    +   S  +E  +  + +ATT+ MVL+GC +CLMYVM S+ D KCPKC +T LLD +++ A  AS K
Subjt:  MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQASKK
RWW08120.1 hypothetical protein GW17_00028462 [Ensete ventricosum]5.3e-0547.3Show/hide
Query:  DDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLDVHNLANQA----SKKN
        DDA+  S  +    SSS +E    + MVL GC +CLMYVM S  DLKCPKC +T L   HN    A    +KKN
Subjt:  DDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLDVHNLANQA----SKKN
TYH76956.1 hypothetical protein ES332_D04G121400v1 [Gossypium tomentosum]2.4e-0545.21Show/hide
Query:  MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQASKK
        + P    +   S  +E  +  + +ATT+ MVLLGC +CLMYVM S+ D KCPKC +T LLD +++ A  AS K
Subjt:  MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQASKK
TrEMBL top hitse value%identityAlignment
A0A0D2Q5L5 Uncharacterized protein2.5e-0543.84Show/hide
Query:  MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQASKK
        + P    +   S  +E  +  + +ATT+ MVL+GC +CLMYVM S+ D KCPKC +T LLD +++ A  AS K
Subjt:  MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQASKK
A0A5D2LD87 Uncharacterized protein1.1e-0545.21Show/hide
Query:  MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQASKK
        + P    +   S  +E  +  + +ATT+ MVLLGC +CLMYVM S+ D KCPKC +T LLD +++ A  AS K
Subjt:  MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQASKK
A0A5J5RUL1 Uncharacterized protein2.5e-0543.84Show/hide
Query:  MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQASKK
        + P    +   S  +E  +  + +ATT+ MVL+GC +CLMYVM S+ D KCPKC +T LLD +++ A  AS K
Subjt:  MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQASKK
A0A7J9CEH7 Uncharacterized protein2.5e-0543.84Show/hide
Query:  MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQASKK
        + P    +   S  +E  +  + +ATT+ MVL+GC +CLMYVM S+ D KCPKC +T LLD +++ A  AS K
Subjt:  MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQASKK
A0A7J9M6N6 Uncharacterized protein2.5e-0543.84Show/hide
Query:  MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQASKK
        + P    +   S  +E  +  + +ATT+ MVL+GC +CLMYVM S+ D KCPKC +T LLD +++ A  AS K
Subjt:  MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQASKK
SwissProt top hitse value%identityAlignment
Q9FNI1 Protein GL2-INTERACTING REPRESSOR 13.8e-0658Show/hide
Query:  TEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQAS
        T   TTS MVL+GC +CLMYVM S+ D KCPKC +T LLD +H  A  A+
Subjt:  TEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQAS
Q9SRN4 Protein GL2-INTERACTING REPRESSOR 21.3e-0647.46Show/hide
Query:  PDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD
        P+ +   S S  V   +++ E+ T + MVL+GC +CLMYVM S  D KCPKC +T LLD
Subjt:  PDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD
Arabidopsis top hitse value%identityAlignment
AT3G11600.1 unknown protein9.3e-0847.46Show/hide
Query:  PDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD
        P+ +   S S  V   +++ E+ T + MVL+GC +CLMYVM S  D KCPKC +T LLD
Subjt:  PDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD
AT5G06270.1 unknown protein2.7e-0758Show/hide
Query:  TEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQAS
        T   TTS MVL+GC +CLMYVM S+ D KCPKC +T LLD +H  A  A+
Subjt:  TEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLD-VHNLANQAS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCTGATGACGCAGCTGCTCGAAGTTGCAGCATCTTCGTCGAAAGATCTAGCTCGAAAACCGAGGACGCTACGACATCGGTCATGGTGCTACTGGGATGTACTCA
ATGCCTCATGTACGTCATGTCGTCGAAGTTTGATCTCAAGTGTCCCAAATGTAATAACACTACGTTGCTCGATGTTCACAATTTGGCCAATCAAGCATCCAAGAAAAATC
TTGTTGACATGTCAATCGACGTTGCTAAATGA
mRNA sequenceShow/hide mRNA sequence
CTTGGATCTCTGGCTTTGACATCACATTTTTGTTTTGTGGTTCATGTGAGAATTCTTGTGTCGAGATAACAAGGAGAGTAACGGATGAAGCCTGATGACGCAGCTGCTCG
AAGTTGCAGCATCTTCGTCGAAAGATCTAGCTCGAAAACCGAGGACGCTACGACATCGGTCATGGTGCTACTGGGATGTACTCAATGCCTCATGTACGTCATGTCGTCGA
AGTTTGATCTCAAGTGTCCCAAATGTAATAACACTACGTTGCTCGATGTTCACAATTTGGCCAATCAAGCATCCAAGAAAAATCTTGTTGACATGTCAATCGACGTTGCT
AAATGA
Protein sequenceShow/hide protein sequence
MKPDDAAARSCSIFVERSSSKTEDATTSVMVLLGCTQCLMYVMSSKFDLKCPKCNNTTLLDVHNLANQASKKNLVDMSIDVAK