; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg28255 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28255
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNADH-ubiquinone oxidoreductase chain 3
Genome locationCarg_Chr08:3674800..3675948
RNA-Seq ExpressionCarg28255
SyntenyCarg28255
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031966 - mitochondrial membrane (cellular component)
GO:0070469 - respirasome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domainsIPR000440 - NADH:ubiquinone/plastoquinone oxidoreductase, chain 3
IPR038430 - NADH:ubiquinone oxidoreductase, subunit 3 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAM15514.1 hypothetical protein [Arabidopsis thaliana]2.6e-5479.35Show/hide
Query:  LRSMSRVSKWAFSS-FLFRYAAPR-SRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLV
        +RS S +S WAF+S F+FRYAA   +RSE+T KW V+MSEF PI IYLVI LLVSLI LG+PFPFASNSSTY EKLS YECGF PS DARSRF+IRFYLV
Subjt:  LRSMSRVSKWAFSS-FLFRYAAPR-SRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLV

Query:  SILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE
        SILF+I DLEVTF FPWAVP NKIDLFG WSMMAFLFILTIGFLYEWKRGA DRE
Subjt:  SILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE

CAB4075863.1 unnamed protein product [Lactuca saligna]2.2e-5383.94Show/hide
Query:  FRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWA
        FRYAAPR+RSE+T KW VVMSEF PI+IYLVI  LVSLIPLG+PFPFASNSSTY EKLS YECGF P  DARSRF+IRFYLVSILFII D EVTFSFPWA
Subjt:  FRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWA

Query:  VPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE
        VP NKID FGSWSMMAFL ILTIG LYEWKRGA DRE
Subjt:  VPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE

GEV07194.1 NADH dehydrogenase subunit 3, mitochondrial [Tanacetum cinerariifolium]8.3e-5383.94Show/hide
Query:  FRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWA
        FRYAAPR+RSE+T KW VVMSEF PI IYLVI  LVSLIPLG+PFPFASNSSTY EKLS YECGF P  DARSRF+IRFYLVSILFII D EVTFSFPWA
Subjt:  FRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWA

Query:  VPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE
        VP NKID FGSWSMMAFL ILTIG LYEWKRGA DRE
Subjt:  VPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE

KAF1863087.1 hypothetical protein Lal_00041074 [Lupinus albus]1.5e-5486.86Show/hide
Query:  FRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWA
        F YAAPR+RSERT KWVVVMSEF PI IYLVI LLVSLIPLGLPFPFASNSSTY EKLS YECGF P  DARSRF+IRFYLVSILFII D EVTFSFPWA
Subjt:  FRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWA

Query:  VPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE
        VP NKID FGSWSMMAFLFILTIG LYEWKRGA DRE
Subjt:  VPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE

KAG7025767.1 NADH-ubiquinone oxidoreductase chain 3, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-90100Show/hide
Query:  MPLSVDPAYARHPRSSERIGALRSMSRVSKWAFSSFLFRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYEC
        MPLSVDPAYARHPRSSERIGALRSMSRVSKWAFSSFLFRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYEC
Subjt:  MPLSVDPAYARHPRSSERIGALRSMSRVSKWAFSSFLFRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYEC

Query:  GFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE
        GFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE
Subjt:  GFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE

TrEMBL top hitse value%identityAlignment
A0A444Y6J8 NADH dehydrogenase subunit 31.5e-5282.73Show/hide
Query:  FLFRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFP
        F FRYAAPR+R ERT KW VVMSEF PI I LVI LLVSLIPLG+PFPFASNS TY EKLS YECGF P  DARSRF+IRFYLVSILFII D EVTFSFP
Subjt:  FLFRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFP

Query:  WAVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE
        WAVP NKID FGSWSMMAFL ILTIG LYEWKRGA DRE
Subjt:  WAVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE

A0A6A5LPN8 NADH dehydrogenase subunit 37.4e-5586.86Show/hide
Query:  FRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWA
        F YAAPR+RSERT KWVVVMSEF PI IYLVI LLVSLIPLGLPFPFASNSSTY EKLS YECGF P  DARSRF+IRFYLVSILFII D EVTFSFPWA
Subjt:  FRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWA

Query:  VPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE
        VP NKID FGSWSMMAFLFILTIG LYEWKRGA DRE
Subjt:  VPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE

A0A6S7L7V2 NADH dehydrogenase subunit 31.1e-5383.94Show/hide
Query:  FRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWA
        FRYAAPR+RSE+T KW VVMSEF PI+IYLVI  LVSLIPLG+PFPFASNSSTY EKLS YECGF P  DARSRF+IRFYLVSILFII D EVTFSFPWA
Subjt:  FRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWA

Query:  VPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE
        VP NKID FGSWSMMAFL ILTIG LYEWKRGA DRE
Subjt:  VPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE

A0A7D4ZDV8 NADH-ubiquinone oxidoreductase chain 31.7e-5178Show/hide
Query:  MSRVSKWAFSSFLFRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFI
        M R  +       FRYAAPR  SERT KW VVMSEF PI IYLVI LLVSLI LGLPFPFASNSSTY EKLS YECGF P  DARSRF+IRFYLVSILFI
Subjt:  MSRVSKWAFSSFLFRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFI

Query:  ILDLEVTFSFPWAVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE
        I D EVTF FPWAVP NKID FGSWSMMAFL ILTIG LYEWKRGA DRE
Subjt:  ILDLEVTFSFPWAVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE

R4IUU5 NADH-ubiquinone oxidoreductase chain 33.4e-5278.67Show/hide
Query:  MSRVSKWAFSSFLFRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFI
        M R  +       FRYAAPR  SERT KW VVMSEF PI IYLVI LLVSLI LGLPFPFASNSSTY EKLS YECGF P  DARSRF+IRFYLVSILFI
Subjt:  MSRVSKWAFSSFLFRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFI

Query:  ILDLEVTFSFPWAVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE
        I D EVTFSFPWAVP NKID FGSWSMMAFL ILTIG LYEWKRGA DRE
Subjt:  ILDLEVTFSFPWAVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE

SwissProt top hitse value%identityAlignment
P27062 NADH-ubiquinone oxidoreductase chain 31.3e-4885.59Show/hide
Query:  MSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFLF
        MSEF PI IYLVI LLVSLIPLG+PFPFASNSSTY +KLS YECGF PS DARSRF+IRFYLVSILFII D EVTFSFPWAVP NKID FGSWSMMAFL 
Subjt:  MSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIG LYEWKRGA DRE
Subjt:  ILTIGFLYEWKRGALDRE

P68159 NADH-ubiquinone oxidoreductase chain 31.9e-4783.19Show/hide
Query:  VMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFL
        +M EF PI+IYLVI LLVSLI LG+PF FASNSSTY EKLS YECGF P  DARSRF+IRFYLVSILF+I DLEVTF FPWAV LNKIDLFG WSMMAFL
Subjt:  VMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFL

Query:  FILTIGFLYEWKRGALDRE
        FILTIGFLYEWKRGALD E
Subjt:  FILTIGFLYEWKRGALDRE

P68160 NADH-ubiquinone oxidoreductase chain 31.9e-4783.19Show/hide
Query:  VMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFL
        +M EF PI+IYLVI LLVSLI LG+PF FASNSSTY EKLS YECGF P  DARSRF+IRFYLVSILF+I DLEVTF FPWAV LNKIDLFG WSMMAFL
Subjt:  VMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFL

Query:  FILTIGFLYEWKRGALDRE
        FILTIGFLYEWKRGALD E
Subjt:  FILTIGFLYEWKRGALDRE

P92533 NADH-ubiquinone oxidoreductase chain 31.9e-4783.19Show/hide
Query:  VMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFL
        +M EF PI+IYLVI LLVSLI LG+PF FASNSSTY EKLS YECGF P  DARSRF+IRFYLVSILF+I DLEVTF FPWAV LNKIDLFG WSMMAFL
Subjt:  VMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFL

Query:  FILTIGFLYEWKRGALDRE
        FILTIGFLYEWKRGALD E
Subjt:  FILTIGFLYEWKRGALDRE

Q96007 NADH-ubiquinone oxidoreductase chain 31.9e-4784.75Show/hide
Query:  MSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFLF
        MSEF PI+IYLV+ LLVSLI LGLPF FASNSSTY EKLS YECGF P  DARSRF+IRFYLVSILFII DLEVTF FPWAV LNKIDLFG WSMMAFL 
Subjt:  MSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIGFLYEWKRGALD E
Subjt:  ILTIGFLYEWKRGALDRE

Arabidopsis top hitse value%identityAlignment
AT2G07751.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein1.4e-5086.44Show/hide
Query:  MSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFLF
        MSEF PI IYLVI LLVSLI LG+PFPFASNSSTY EKLS YECGF PS DARSRF+IRFYLVSILF+I DLEVTF FPWAVP NKIDLFG WSMMAFLF
Subjt:  MSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIGFLYEWKRGA DRE
Subjt:  ILTIGFLYEWKRGALDRE

ATCG00440.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein7.6e-1234.23Show/hide
Query:  IYLVIILLVSLIPLGLPFPFASNSSTYL---EKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFLFILTIG
        I+   +L+ S IP+ L F  +   S      EKLS+YE G  P  DA  +F IR+Y+ +++F++ D+E  F +PWA+  + + +        F+ IL +G
Subjt:  IYLVIILLVSLIPLGLPFPFASNSSTYL---EKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFLFILTIG

Query:  FLYEWKRGALD
         +Y W++GAL+
Subjt:  FLYEWKRGALD

ATMG00990.1 NADH dehydrogenase 31.4e-5085.71Show/hide
Query:  VMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFL
        +MSEF PI IYLVI LLVSLI LG+PFPFASNSSTY EKLS YECGF PS DARSRF+IRFYLVSILF+I DLEVTF FPWAVP NKIDLFG WSMMAFL
Subjt:  VMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARSRFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFL

Query:  FILTIGFLYEWKRGALDRE
        FILTIGFLYEWKRGA DRE
Subjt:  FILTIGFLYEWKRGALDRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTTGTCAGTTGATCCGGCTTATGCGAGGCATCCGCGTAGCTCTGAGCGCATTGGAGCTCTTCGCTCGATGTCCCGGGTTTCAAAATGGGCTTTTTCTTCTTTTCT
TTTTCGGTACGCCGCTCCGCGATCAAGGAGTGAAAGAACCAACAAGTGGGTTGTGGTGATGTCAGAATTTGTGCCTATTTATATCTATTTAGTGATCATTCTACTAGTTT
CTTTGATCCCACTTGGTCTTCCTTTTCCATTTGCTTCAAATAGTTCAACCTATCTAGAAAAATTGTCGACTTATGAATGTGGTTTCATTCCTTCCAGTGATGCTAGAAGT
CGTTTCAATATACGATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCTAGAAGTCACCTTTTCCTTTCCTTGGGCAGTACCTCTCAACAAGATTGATCTGTTTGG
ATCTTGGTCCATGATGGCCTTTTTATTTATTTTGACGATTGGATTTCTCTATGAATGGAAAAGGGGTGCTTTGGATCGGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGTTGTCAGTTGATCCGGCTTATGCGAGGCATCCGCGTAGCTCTGAGCGCATTGGAGCTCTTCGCTCGATGTCCCGGGTTTCAAAATGGGCTTTTTCTTCTTTTCT
TTTTCGGTACGCCGCTCCGCGATCAAGGAGTGAAAGAACCAACAAGTGGGTTGTGGTGATGTCAGAATTTGTGCCTATTTATATCTATTTAGTGATCATTCTACTAGTTT
CTTTGATCCCACTTGGTCTTCCTTTTCCATTTGCTTCAAATAGTTCAACCTATCTAGAAAAATTGTCGACTTATGAATGTGGTTTCATTCCTTCCAGTGATGCTAGAAGT
CGTTTCAATATACGATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCTAGAAGTCACCTTTTCCTTTCCTTGGGCAGTACCTCTCAACAAGATTGATCTGTTTGG
ATCTTGGTCCATGATGGCCTTTTTATTTATTTTGACGATTGGATTTCTCTATGAATGGAAAAGGGGTGCTTTGGATCGGGAGTAG
Protein sequenceShow/hide protein sequence
MPLSVDPAYARHPRSSERIGALRSMSRVSKWAFSSFLFRYAAPRSRSERTNKWVVVMSEFVPIYIYLVIILLVSLIPLGLPFPFASNSSTYLEKLSTYECGFIPSSDARS
RFNIRFYLVSILFIILDLEVTFSFPWAVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE