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Carg28269 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28269
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionthioredoxin Y2, chloroplastic
Genome locationCarg_Chr09:9051394..9055555
RNA-Seq ExpressionCarg28269
SyntenyCarg28269
Gene Ontology termsGO:0006662 - glycerol ether metabolic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0015035 - protein disulfide oxidoreductase activity (molecular function)
GO:0016671 - oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592261.1 Thioredoxin Y1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.3e-2496.88Show/hide
Query:  MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV
        MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLP QLRCVRLGNCGISAP RSRIFPV
Subjt:  MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV

KAG7025105.1 hypothetical protein SDJN02_13928, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-44100Show/hide
Query:  MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPVEGAVAAGEEISLRKYGNGNQCLRQEFWVW
        MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPVEGAVAAGEEISLRKYGNGNQCLRQEFWVW
Subjt:  MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPVEGAVAAGEEISLRKYGNGNQCLRQEFWVW

XP_022932802.1 thioredoxin Y2, chloroplastic [Cucurbita moschata]3.0e-25100Show/hide
Query:  MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV
        MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV
Subjt:  MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV

XP_022974037.1 thioredoxin Y1, chloroplastic-like [Cucurbita maxima]7.4e-2496.88Show/hide
Query:  MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV
        MAASISTSPYPLLTSERSNRFA NDSSSSRLF SSSLQLPVQLRCVRLGNCGISAPSRSRIFPV
Subjt:  MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV

XP_023520827.1 uncharacterized protein LOC111784322 isoform X1 [Cucurbita pepo subsp. pepo]2.2e-2396.88Show/hide
Query:  MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV
        MAASISTSPYPLLTSERSNRFAVNDSSSSRLF SSSLQLPVQLRCVRLGNCGISA SRSRIFPV
Subjt:  MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV

TrEMBL top hitse value%identityAlignment
A0A6J1DH52 thioredoxin Y2, chloroplastic-like2.1e-1681.54Show/hide
Query:  MAASISTSPYPLLTSERSNRFAVND-SSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV
        MAASISTSPYPLLTSERSNRF  ND SSSSR   SSSL LP Q RC RLGN GISAPSRSRI PV
Subjt:  MAASISTSPYPLLTSERSNRFAVND-SSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV

A0A6J1EX66 uncharacterized protein LOC1114389081.1e-1271.88Show/hide
Query:  MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV
        MAASISTS  PLLTSER N  A N +S SRL  +SS+QLPVQLRCVRLGN G+S  SRSRI PV
Subjt:  MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV

A0A6J1EXS8 thioredoxin Y2, chloroplastic1.5e-25100Show/hide
Query:  MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV
        MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV
Subjt:  MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV

A0A6J1I628 uncharacterized protein LOC1114714111.7e-1373.44Show/hide
Query:  MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV
        MAASISTS  PLLTSER NR A N +S SRL  +SS+QLPVQLRCVRLGN G+S  SRSRI PV
Subjt:  MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV

A0A6J1I964 thioredoxin Y1, chloroplastic-like3.6e-2496.88Show/hide
Query:  MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV
        MAASISTSPYPLLTSERSNRFA NDSSSSRLF SSSLQLPVQLRCVRLGNCGISAPSRSRIFPV
Subjt:  MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCTCCATTTCAACATCACCTTATCCTCTGCTCACCTCAGAGCGCTCCAATCGCTTCGCCGTGAATGATTCATCTTCATCTAGATTGTTTTTCTCCTCGTCTCT
ACAGCTACCGGTTCAGCTTCGATGTGTTCGACTTGGAAACTGTGGGATTTCTGCTCCGTCGCGGTCTCGAATCTTCCCTGTGGAAGGAGCTGTAGCTGCGGGGGAGGAGA
TATCACTGAGAAAATATGGAAATGGAAATCAATGTCTTCGACAGGAATTCTGGGTATGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCTCCATTTCAACATCACCTTATCCTCTGCTCACCTCAGAGCGCTCCAATCGCTTCGCCGTGAATGATTCATCTTCATCTAGATTGTTTTTCTCCTCGTCTCT
ACAGCTACCGGTTCAGCTTCGATGTGTTCGACTTGGAAACTGTGGGATTTCTGCTCCGTCGCGGTCTCGAATCTTCCCTGTGGAAGGAGCTGTAGCTGCGGGGGAGGAGA
TATCACTGAGAAAATATGGAAATGGAAATCAATGTCTTCGACAGGAATTCTGGGTATGGTAGATGACAAATTTCAATACAATTAACACCCCTCCCCCCCTAATACATCTG
CATCATTATATAATTGAAATATTTGAAGCATGTAACCATAGACGTTGGTATCAATCACAGTTTTTGTTTATTTTATTTTTAGTGTTCATTATAAGTTAGCGGTGTTCTAT
GATCTAATAA
Protein sequenceShow/hide protein sequence
MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSRIFPVEGAVAAGEEISLRKYGNGNQCLRQEFWVW