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Carg28273 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28273
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr09:1596670..1597236
RNA-Seq ExpressionCarg28273
SyntenyCarg28273
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039201.1 uncharacterized protein E6C27_scaffold121G001180 [Cucumis melo var. makuwa]3.7e-0843.93Show/hide
Query:  MENSTTKTNKLTD-EPDVH--SHS----TLCDCILHFFIAILSYFGFNHRG-RYRPTP----------------------DEPEEESEYFRGHAPPPPPW
        M++ST K+ K  D E D+H   H     T+ D IL  FIAIL +FGF      YRP                        D+ EEESEY+R H PPPPPW
Subjt:  MENSTTKTNKLTD-EPDVH--SHS----TLCDCILHFFIAILSYFGFNHRG-RYRPTP----------------------DEPEEESEYFRGHAPPPPPW

Query:  STGGGGQ
        STGGGGQ
Subjt:  STGGGGQ

KAG6592221.1 hypothetical protein SDJN03_14567, partial [Cucurbita argyrosperma subsp. sororia]6.9e-3998.73Show/hide
Query:  MENSTTKTNKLTDEPDVHSHSTLCDCILHFFIAILSYFGFNHRGRYRPTPDEPEEESEYFRGHAPPPPPWSTGGGGQTD
        MENSTTKTNKLTDEPDVHSHSTLCDCILHFFIAILSYFGFNH GRYRPTPDEPEEESEYFRGHAPPPPPWSTGGGGQTD
Subjt:  MENSTTKTNKLTDEPDVHSHSTLCDCILHFFIAILSYFGFNHRGRYRPTPDEPEEESEYFRGHAPPPPPWSTGGGGQTD

KAG7024354.1 hypothetical protein SDJN02_13168 [Cucurbita argyrosperma subsp. argyrosperma]8.2e-40100Show/hide
Query:  MENSTTKTNKLTDEPDVHSHSTLCDCILHFFIAILSYFGFNHRGRYRPTPDEPEEESEYFRGHAPPPPPWSTGGGGQTD
        MENSTTKTNKLTDEPDVHSHSTLCDCILHFFIAILSYFGFNHRGRYRPTPDEPEEESEYFRGHAPPPPPWSTGGGGQTD
Subjt:  MENSTTKTNKLTDEPDVHSHSTLCDCILHFFIAILSYFGFNHRGRYRPTPDEPEEESEYFRGHAPPPPPWSTGGGGQTD

XP_008464348.1 PREDICTED: uncharacterized protein LOC103502256 [Cucumis melo]3.7e-0843.93Show/hide
Query:  MENSTTKTNKLTD-EPDVH--SHS----TLCDCILHFFIAILSYFGFNHRG-RYRPTP----------------------DEPEEESEYFRGHAPPPPPW
        M++ST K+ K  D E D+H   H     T+ D IL  FIAIL +FGF      YRP                        D+ EEESEY+R H PPPPPW
Subjt:  MENSTTKTNKLTD-EPDVH--SHS----TLCDCILHFFIAILSYFGFNHRG-RYRPTP----------------------DEPEEESEYFRGHAPPPPPW

Query:  STGGGGQ
        STGGGGQ
Subjt:  STGGGGQ

XP_038886557.1 uncharacterized protein LOC120076731 [Benincasa hispida]4.5e-1452.13Show/hide
Query:  DEPDVHSHS----TLCDCILHFFIAILSYFGFNHRG-RYRPTP----------------------DEPEEESEYFRGHAPPPPPWSTGGGGQTD
        DE D+HSH      +CD IL  FIAIL + GFNH G  YRP P                      DE EEESEY+R H PPPPPWSTGGGGQTD
Subjt:  DEPDVHSHS----TLCDCILHFFIAILSYFGFNHRG-RYRPTP----------------------DEPEEESEYFRGHAPPPPPWSTGGGGQTD

TrEMBL top hitse value%identityAlignment
A0A0A0KBZ4 Uncharacterized protein4.4e-0742.2Show/hide
Query:  MENSTTKTNKLTD-EPDVH--SHS----TLCDCILHFFIAILSYFGFNHRG-RYRPTP----------------------DEPEEESEYFRGHAPPPPPW
        M+ ST K+ K  D E D+H   H     T+ D IL  FI+IL +FGF      YRP                        D+ EEESEY+R H PP PPW
Subjt:  MENSTTKTNKLTD-EPDVH--SHS----TLCDCILHFFIAILSYFGFNHRG-RYRPTP----------------------DEPEEESEYFRGHAPPPPPW

Query:  STGGGGQTD
        STGGGGQ D
Subjt:  STGGGGQTD

A0A1S3CLD8 uncharacterized protein LOC1035022561.8e-0843.93Show/hide
Query:  MENSTTKTNKLTD-EPDVH--SHS----TLCDCILHFFIAILSYFGFNHRG-RYRPTP----------------------DEPEEESEYFRGHAPPPPPW
        M++ST K+ K  D E D+H   H     T+ D IL  FIAIL +FGF      YRP                        D+ EEESEY+R H PPPPPW
Subjt:  MENSTTKTNKLTD-EPDVH--SHS----TLCDCILHFFIAILSYFGFNHRG-RYRPTP----------------------DEPEEESEYFRGHAPPPPPW

Query:  STGGGGQ
        STGGGGQ
Subjt:  STGGGGQ

A0A5D3D4J4 Uncharacterized protein1.8e-0843.93Show/hide
Query:  MENSTTKTNKLTD-EPDVH--SHS----TLCDCILHFFIAILSYFGFNHRG-RYRPTP----------------------DEPEEESEYFRGHAPPPPPW
        M++ST K+ K  D E D+H   H     T+ D IL  FIAIL +FGF      YRP                        D+ EEESEY+R H PPPPPW
Subjt:  MENSTTKTNKLTD-EPDVH--SHS----TLCDCILHFFIAILSYFGFNHRG-RYRPTP----------------------DEPEEESEYFRGHAPPPPPW

Query:  STGGGGQ
        STGGGGQ
Subjt:  STGGGGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATTCAACCACAAAGACCAACAAGCTGACTGATGAACCTGATGTTCATTCTCATTCTACTCTCTGTGATTGCATCCTACACTTTTTCATCGCCATTTTGAGTTA
TTTCGGATTTAATCACCGTGGACGTTATCGACCAACACCCGATGAACCTGAGGAGGAAAGTGAGTACTTTAGAGGGCATGCTCCTCCTCCACCGCCGTGGAGCACCGGCG
GCGGTGGTCAAACCGACTAA
mRNA sequenceShow/hide mRNA sequence
AAAACCATAGATCAAACCACGACACAAATTCTTAACTTTTTGTGGAAAAATAGGAAACAAAATGGAGAATTCAACCACAAAGACCAACAAGCTGACTGATGAACCTGATG
TTCATTCTCATTCTACTCTCTGTGATTGCATCCTACACTTTTTCATCGCCATTTTGAGTTATTTCGGATTTAATCACCGTGGACGTTATCGACCAACACCCGATGAACCT
GAGGAGGAAAGTGAGTACTTTAGAGGGCATGCTCCTCCTCCACCGCCGTGGAGCACCGGCGGCGGTGGTCAAACCGACTAAGATATTGTAACTAGCATCGCCTCGTTTTA
GATCTGTGTAGCAATGTAATATGTATTATAGTGTATGAAGTAGCAAACCAAAATTCCAAGCTTCTCTCTTTCTATAATTTAAAATAATTTATTAATTACTTTTTTAATTT
CAAACAATATATA
Protein sequenceShow/hide protein sequence
MENSTTKTNKLTDEPDVHSHSTLCDCILHFFIAILSYFGFNHRGRYRPTPDEPEEESEYFRGHAPPPPPWSTGGGGQTD