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Carg28278 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28278
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionsphinganine C4-monooxygenase 1-like
Genome locationCarg_Chr05:5780689..5781193
RNA-Seq ExpressionCarg28278
SyntenyCarg28278
Gene Ontology termsGO:0008610 - lipid biosynthetic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0005506 - iron ion binding (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR006694 - Fatty acid hydroxylase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029937.1 Sphinganine C4-monooxygenase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-77100Show/hide
Query:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVEESPSSSFPFATIKTVDDHCGLWLPGNLFHLLFRNNTAYHDLTIS
        MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVEESPSSSFPFATIKTVDDHCGLWLPGNLFHLLFRNNTAYHDLTIS
Subjt:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVEESPSSSFPFATIKTVDDHCGLWLPGNLFHLLFRNNTAYHDLTIS

Query:  YMATRLTIHRPFLLHGIESWYLYALLPGEEKQAAALSTPKIE
        YMATRLTIHRPFLLHGIESWYLYALLPGEEKQAAALSTPKIE
Subjt:  YMATRLTIHRPFLLHGIESWYLYALLPGEEKQAAALSTPKIE

XP_008441706.1 PREDICTED: sphinganine C4-monooxygenase 1-like [Cucumis melo]8.6e-4065.67Show/hide
Query:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP
        MV LQ +TAMFVLDTWQYFAHRYMHHNKFLYRHIHS HHRLVVPYAFGALYNHPVE                  +P  S   F FATIKTVDDHCGLWLP
Subjt:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP

Query:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL
        GNLFH+LFRNNTAYHD+      ++    +PF +
Subjt:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL

XP_022946507.1 sphinganine C4-monooxygenase 1-like [Cucurbita moschata]4.1e-4269.4Show/hide
Query:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP
        MVALQ VTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE                  +P  S   F FATIKTVDDHCGLWLP
Subjt:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP

Query:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL
        GNLFHLLFRNNTAYHDL       ++   +PF +
Subjt:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL

XP_022972857.1 sphinganine C4-monooxygenase 1-like [Cucurbita maxima]4.1e-4269.4Show/hide
Query:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP
        MVALQ VTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE                  +P  S   F FATIKTVDDHCGLWLP
Subjt:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP

Query:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL
        GNLFHLLFRNNTAYHDL       ++   +PF +
Subjt:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL

XP_023546641.1 sphinganine C4-monooxygenase 1-like [Cucurbita pepo subsp. pepo]4.1e-4269.4Show/hide
Query:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP
        MVALQ VTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE                  +P  S   F FATIKTVDDHCGLWLP
Subjt:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP

Query:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL
        GNLFHLLFRNNTAYHDL       ++   +PF +
Subjt:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL

TrEMBL top hitse value%identityAlignment
A0A0A0LJX9 Fatty acid hydroxylase domain-containing protein4.2e-4064.93Show/hide
Query:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP
        MV LQ +TAMF+LDTWQYFAHRYMHHNKFLYRHIHS HHRLVVPYAFGALYNHPVE                  +P  S   F FATIKTVDDHCGLWLP
Subjt:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP

Query:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL
        GNLFH+LFRNNTAYHD+      ++    +PF +
Subjt:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL

A0A1S3B426 sphinganine C4-monooxygenase 1-like4.2e-4065.67Show/hide
Query:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP
        MV LQ +TAMFVLDTWQYFAHRYMHHNKFLYRHIHS HHRLVVPYAFGALYNHPVE                  +P  S   F FATIKTVDDHCGLWLP
Subjt:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP

Query:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL
        GNLFH+LFRNNTAYHD+      ++    +PF +
Subjt:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL

A0A5D3CZU2 Sphinganine C4-monooxygenase 1-like4.2e-4065.67Show/hide
Query:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP
        MV LQ +TAMFVLDTWQYFAHRYMHHNKFLYRHIHS HHRLVVPYAFGALYNHPVE                  +P  S   F FATIKTVDDHCGLWLP
Subjt:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP

Query:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL
        GNLFH+LFRNNTAYHD+      ++    +PF +
Subjt:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL

A0A6J1G422 sphinganine C4-monooxygenase 1-like2.0e-4269.4Show/hide
Query:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP
        MVALQ VTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE                  +P  S   F FATIKTVDDHCGLWLP
Subjt:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP

Query:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL
        GNLFHLLFRNNTAYHDL       ++   +PF +
Subjt:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL

A0A6J1I5Y6 sphinganine C4-monooxygenase 1-like2.0e-4269.4Show/hide
Query:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP
        MVALQ VTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE                  +P  S   F FATIKTVDDHCGLWLP
Subjt:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP

Query:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL
        GNLFHLLFRNNTAYHDL       ++   +PF +
Subjt:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL

SwissProt top hitse value%identityAlignment
B8B4W4 Very-long-chain aldehyde decarbonylase GL1-92.1e-3354.62Show/hide
Query:  ALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLPGN
        A Q + AM V+D+WQYF HRYMH NKFLYRHIHS HHRL+VPYA GALYNHP+E                  +P +S   F FA +KTVDDHCGLWLP N
Subjt:  ALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLPGN

Query:  LFHLLFRNNTAYHDLTISYMATRLTIHRPF
        +F  LF+NNTAYHD+      ++    +PF
Subjt:  LFHLLFRNNTAYHDLTISYMATRLTIHRPF

O94298 Sphingolipid C4-hydroxylase sur21.0e-2244.62Show/hide
Query:  ALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVEE-----------------SPSSS---FPFATIKTVDDHCGLWLPGN
        A Q   A F++D+WQYF HRY+H+NK LY  IH+HHHRL VPYA GALYNHP E                  SP  +   F  +T+KTVDDHCG   P +
Subjt:  ALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVEE-----------------SPSSS---FPFATIKTVDDHCGLWLPGN

Query:  LFHLLFRNNTAYHDLTISYMATRLTIHRPF
           + F NN  YHDL       +    +PF
Subjt:  LFHLLFRNNTAYHDLTISYMATRLTIHRPF

Q0D4G3 Very-long-chain aldehyde decarbonylase GL1-92.1e-3354.62Show/hide
Query:  ALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLPGN
        A Q + AM V+D+WQYF HRYMH NKFLYRHIHS HHRL+VPYA GALYNHP+E                  +P +S   F FA +KTVDDHCGLWLP N
Subjt:  ALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLPGN

Query:  LFHLLFRNNTAYHDLTISYMATRLTIHRPF
        +F  LF+NNTAYHD+      ++    +PF
Subjt:  LFHLLFRNNTAYHDLTISYMATRLTIHRPF

Q8VYI1 Sphinganine C4-monooxygenase 14.4e-3959.7Show/hide
Query:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP
        ++A Q VTAM VLDTWQYF HRYMH NKFLY+HIHS HHRL+VPYA+GALYNHPVE                  SP +S   F FATIKTVDDHCGLWLP
Subjt:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP

Query:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL
        GNLFH++F+NN+AYHD+      T+    +PF +
Subjt:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL

Q9AST3 Sphinganine C4-monooxygenase 22.3e-3554.48Show/hide
Query:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP
        ++A Q + AM V+DTWQYF HRYMH NKFLY+HIHS HHRL+VPY++GALYNHP+E                  SP ++   F FATIKTVDDHCGLWLP
Subjt:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP

Query:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL
        GN FH+ F NN+AYHD+      T+    +PF +
Subjt:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL

Arabidopsis top hitse value%identityAlignment
AT1G07420.1 sterol 4-alpha-methyl-oxidase 2-11.6e-0426.96Show/hide
Query:  VALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE---------ESPSSSFP----------FATIKTVDDHCGLWLPGN
        V+ Q++    + D   Y+ HR + H+K+LY+++HS HH    P+   + Y HP E           P+ + P             ++TV+ HCG   P +
Subjt:  VALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE---------ESPSSSFP----------FATIKTVDDHCGLWLPGN

Query:  LFHLL-FRNNTAYHD
        L + L       +HD
Subjt:  LFHLL-FRNNTAYHD

AT1G07420.2 sterol 4-alpha-methyl-oxidase 2-11.6e-0426.96Show/hide
Query:  VALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE---------ESPSSSFP----------FATIKTVDDHCGLWLPGN
        V+ Q++    + D   Y+ HR + H+K+LY+++HS HH    P+   + Y HP E           P+ + P             ++TV+ HCG   P +
Subjt:  VALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE---------ESPSSSFP----------FATIKTVDDHCGLWLPGN

Query:  LFHLL-FRNNTAYHD
        L + L       +HD
Subjt:  LFHLL-FRNNTAYHD

AT1G14290.1 sphingoid base hydroxylase 21.6e-3654.48Show/hide
Query:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP
        ++A Q + AM V+DTWQYF HRYMH NKFLY+HIHS HHRL+VPY++GALYNHP+E                  SP ++   F FATIKTVDDHCGLWLP
Subjt:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP

Query:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL
        GN FH+ F NN+AYHD+      T+    +PF +
Subjt:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL

AT1G69640.1 sphingoid base hydroxylase 13.2e-4059.7Show/hide
Query:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP
        ++A Q VTAM VLDTWQYF HRYMH NKFLY+HIHS HHRL+VPYA+GALYNHPVE                  SP +S   F FATIKTVDDHCGLWLP
Subjt:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE-----------------ESPSSS---FPFATIKTVDDHCGLWLP

Query:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL
        GNLFH++F+NN+AYHD+      T+    +PF +
Subjt:  GNLFHLLFRNNTAYHDLTISYMATRLTIHRPFLL

AT2G29390.3 sterol 4-alpha-methyl-oxidase 2-21.6e-0427.97Show/hide
Query:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE---------ESPSSSFP----------FATIKTVDDHCGL---W
        +V+ Q++    + D   Y+ HR + H K+LY+++HS HH    P+   + Y HP E           P+ + P             I+TV+ HCG    W
Subjt:  MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVE---------ESPSSSFP----------FATIKTVDDHCGL---W

Query:  LPGNLFHLLFRNNTAYHD
         P N   L       +HD
Subjt:  LPGNLFHLLFRNNTAYHD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCTTTGCAATTGGTAACCGCGATGTTCGTTCTGGACACGTGGCAGTACTTCGCACACAGATACATGCATCATAACAAGTTTCTGTACAGACACATTCATTCTCA
TCACCATAGGCTCGTTGTTCCATATGCATTTGGGGCATTGTATAATCATCCTGTGGAAGAGTCTCCATCTTCTTCTTTTCCTTTCGCCACTATTAAGACTGTAGACGATC
ACTGTGGATTATGGCTGCCTGGTAACCTCTTCCACCTCTTATTTCGCAACAATACTGCATATCACGACCTCACCATCAGCTATATGGCAACAAGGTTAACTATTCACAGA
CCTTTTTTGTTACATGGGATAGAATCTTGGTACCTATATGCCTTACTCCCTGGAGAAGAGAAGCAGGCGGCGGCTTTGAGCACGCCCAAGATTGAA
mRNA sequenceShow/hide mRNA sequence
TGCAGTTCCAAAATCCTGGCCAATGGTTGCTTTGCAATTGGTAACCGCGATGTTCGTTCTGGACACGTGGCAGTACTTCGCACACAGATACATGCATCATAACAAGTTTC
TGTACAGACACATTCATTCTCATCACCATAGGCTCGTTGTTCCATATGCATTTGGGGCATTGTATAATCATCCTGTGGAAGAGTCTCCATCTTCTTCTTTTCCTTTCGCC
ACTATTAAGACTGTAGACGATCACTGTGGATTATGGCTGCCTGGTAACCTCTTCCACCTCTTATTTCGCAACAATACTGCATATCACGACCTCACCATCAGCTATATGGC
AACAAGGTTAACTATTCACAGACCTTTTTTGTTACATGGGATAGAATCTTGGTACCTATATGCCTTACTCCCTGGAGAAGAGAAGCAGGCGGCGGCTTTGAGCACGCCCA
AGATTGAA
Protein sequenceShow/hide protein sequence
MVALQLVTAMFVLDTWQYFAHRYMHHNKFLYRHIHSHHHRLVVPYAFGALYNHPVEESPSSSFPFATIKTVDDHCGLWLPGNLFHLLFRNNTAYHDLTISYMATRLTIHR
PFLLHGIESWYLYALLPGEEKQAAALSTPKIE