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Carg28279 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28279
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr10:7149402..7151245
RNA-Seq ExpressionCarg28279
SyntenyCarg28279
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023937.1 hypothetical protein SDJN02_14965, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-55100Show/hide
Query:  GRHISLFFTVTLKLSSTSLLRRSPLRALSISLPSLRTFRPHTHRDHPGGAARRRKTGLRQLLFCEVCKHHDLRIDLPSIHLRFLKRRKLYSVRYRTLGAK
        GRHISLFFTVTLKLSSTSLLRRSPLRALSISLPSLRTFRPHTHRDHPGGAARRRKTGLRQLLFCEVCKHHDLRIDLPSIHLRFLKRRKLYSVRYRTLGAK
Subjt:  GRHISLFFTVTLKLSSTSLLRRSPLRALSISLPSLRTFRPHTHRDHPGGAARRRKTGLRQLLFCEVCKHHDLRIDLPSIHLRFLKRRKLYSVRYRTLGAK

Query:  TIFGKDHWVR
        TIFGKDHWVR
Subjt:  TIFGKDHWVR
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAAGACATATAAGTCTCTTTTTTACGGTAACCCTTAAACTATCTTCCACCTCTCTTCTTCGCCGGAGTCCTCTCCGTGCGCTCTCTATTTCCCTCCCTTCACTGCGAAC
CTTCCGGCCACATACTCACCGAGACCATCCAGGCGGCGCGGCACGACGGCGAAAGACAGGCCTGCGCCAGCTCCTTTTTTGCGAGGTTTGCAAGCATCATGATCTCCGAA
TTGACCTGCCTAGCATTCATCTCCGGTTTCTAAAGCGGCGAAAGCTGTATTCAGTCAGATATAGAACTCTAGGGGCCAAAACAATATTTGGTAAAGATCATTGGGTTCGC
TGA
mRNA sequenceShow/hide mRNA sequence
GGAAGACATATAAGTCTCTTTTTTACGGTAACCCTTAAACTATCTTCCACCTCTCTTCTTCGCCGGAGTCCTCTCCGTGCGCTCTCTATTTCCCTCCCTTCACTGCGAAC
CTTCCGGCCACATACTCACCGAGACCATCCAGGCGGCGCGGCACGACGGCGAAAGACAGGCCTGCGCCAGCTCCTTTTTTGCGAGGTTTGCAAGCATCATGATCTCCGAA
TTGACCTGCCTAGCATTCATCTCCGGTTTCTAAAGCGGCGAAAGCTGTATTCAGTCAGATATAGAACTCTAGGGGCCAAAACAATATTTGGTAAAGATCATTGGGTTCGC
TGATTTGTGTGTTGTAGTAAATGATACATGAAAATTGACAAAGGGATCAGAGATTACTCGTTTTTCACCGAAATGTCTGCTTAATACATTCCAATTGCTCTGCTACTCAC
CGGCAAACATAAATTTGACACATGTGAGTCCTCATAAAACAACAACCAAAAGCTCCGTGAGCCCATTCCTTCGTCACCGACGTTAAAGAGGTAAAGGATCCATGTGAGGC
CTATTGGCTCTACTTCGAGGAATTACCATGAAAGAGGGATTCAAACACCACTATCCTTCCTACTCATCTCTCATCTACAAGTTGGCCGTTCTCGTAGATTGGAAGCTGTC
GAGATGATTCTTGATCACTTCTTTTACAAATAGGACATTCGCATGCAAATATGAGACCAACTCTTTTGTCGCTTTGATTCACATTATGGGAGAAGCTCGCTTAGGTAGAG
AAAGGTATTGAGTTTCCATCGAATGCCTTCCTTAATTGTTTTCGTTTGCGCACATCCTGAGATTGTTACTTGCTTAATACATTAGTCTTCACTGTGACAGTTTTCTCTCT
AAAGCAAGTAATCTTCCCAGCAGCCTATGATAGGAGCT
Protein sequenceShow/hide protein sequence
GRHISLFFTVTLKLSSTSLLRRSPLRALSISLPSLRTFRPHTHRDHPGGAARRRKTGLRQLLFCEVCKHHDLRIDLPSIHLRFLKRRKLYSVRYRTLGAKTIFGKDHWVR