; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg28283 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28283
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRPM1-interacting protein 4-like
Genome locationCarg_Chr18:4462656..4463315
RNA-Seq ExpressionCarg28283
SyntenyCarg28283
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573489.1 RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia]5.5e-106100Show/hide
Query:  MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGAVINSGSEKLSSERSGSDYALLKK
        MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGAVINSGSEKLSSERSGSDYALLKK
Subjt:  MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGAVINSGSEKLSSERSGSDYALLKK

Query:  SKENGVEGISRLAPAVAGHGGNPASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASNPQAVPPLMNKTKQPIAHTNTTSGFTSFASKVPT
        SKENGVEGISRLAPAVAGHGGNPASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASNPQAVPPLMNKTKQPIAHTNTTSGFTSFASKVPT
Subjt:  SKENGVEGISRLAPAVAGHGGNPASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASNPQAVPPLMNKTKQPIAHTNTTSGFTSFASKVPT

XP_022142617.1 RPM1-interacting protein 4-like [Momordica charantia]4.9e-6264.68Show/hide
Query:  ANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGG--------EHQRRPRQQPNRERGAVINSGSEKLSSERSGSDY
        A SS HVPKFGNWDTDDVPYTICFENA ELRAAG+TFDPNDPDTYPPE F    H           +H RRPR+QPNR+R    +SGSEKLSSERSGSDY
Subjt:  ANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGG--------EHQRRPRQQPNRERGAVINSGSEKLSSERSGSDY

Query:  ALLK------KSKENGVEGISRLAPAVAGHGGNP--------------ASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASN-PQAVPPLMNKTK-Q
        +LLK      K   NGV+GISR  P  AGHGGNP              ASVPKFGSWDARDPKSGDGYTAIFNK+K+EK+I  SN  QAVPPL N+TK Q
Subjt:  ALLK------KSKENGVEGISRLAPAVAGHGGNP--------------ASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASN-PQAVPPLMNKTK-Q

Query:  PIAHTNTTSGFTSFASKV
        PI       G TSF SKV
Subjt:  PIAHTNTTSGFTSFASKV

XP_022955116.1 RPM1-interacting protein 4-like [Cucurbita moschata]2.0e-10397.91Show/hide
Query:  MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGAVINSGSEKLSSERSGSDYALLKK
        MAGA SSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGA+INSGSEKLSSERSGSDYALLKK
Subjt:  MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGAVINSGSEKLSSERSGSDYALLKK

Query:  SKENGVEGISRLAPAVAGHGGNPASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASNPQAVPPLMNKTKQPIAHTNTTSGFTSFASKV
        SKENGVEGISRLAPAVAGHGGNPASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASNPQ+VPPLMNKTKQPIAHTNTTSGFTSFASK+
Subjt:  SKENGVEGISRLAPAVAGHGGNPASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASNPQAVPPLMNKTKQPIAHTNTTSGFTSFASKV

XP_022994302.1 RPM1-interacting protein 4-like [Cucurbita maxima]1.1e-9893.33Show/hide
Query:  MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGAVINSGSEKLSSERSGSDYALLKK
        MAGANSS HVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKP AH+GGEHQRRPRQQPNRERGA++NSGSEKLSSERSGS+YALLKK
Subjt:  MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGAVINSGSEKLSSERSGSDYALLKK

Query:  SKENGVEGISRLAPAVAGHGGNP----ASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASNPQAVPPLMNKTKQPIAHTNTTSGFTSFASKV
        SKENGVEGISRLAPAVAGHG NP    ASVPKFGSWDA+DPKSGDGYTAIFNKMKIEKQIAASNPQAVPPLMNKTKQPIAHTNTTSGFTSFASK+
Subjt:  SKENGVEGISRLAPAVAGHGGNP----ASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASNPQAVPPLMNKTKQPIAHTNTTSGFTSFASKV

XP_023525812.1 RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo]5.7e-10397.38Show/hide
Query:  MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGAVINSGSEKLSSERSGSDYALLKK
        MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGI FDPNDPDTYPPEVFKP AHDGGEHQRRPRQQPNRERGA+INSGSEKLSSERSGSDYALLKK
Subjt:  MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGAVINSGSEKLSSERSGSDYALLKK

Query:  SKENGVEGISRLAPAVAGHGGNPASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASNPQAVPPLMNKTKQPIAHTNTTSGFTSFASKV
        SKENGVEGISRLAPAVAGHGGNPASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASNPQAVPPLMNK+KQPIAHTNTTSGFTSFASK+
Subjt:  SKENGVEGISRLAPAVAGHGGNPASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASNPQAVPPLMNKTKQPIAHTNTTSGFTSFASKV

TrEMBL top hitse value%identityAlignment
A0A1S3C9P5 RPM1-interacting protein 4-like2.5e-5960.19Show/hide
Query:  MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGAVINSGSEKLSSERSGSDYALL--
        MAG  SS HVPKFGNWD+DDVPYTI FENAREL+AAG+TFDPNDPDTYPP VF        +H R    + + +R  ++NSGSEKLSSERS SDYALL  
Subjt:  MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGAVINSGSEKLSSERSGSDYALL--

Query:  -----KKSKENGVEGISRLAPAVAGHGGN-------------PASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAAS-NPQAVPPLMNKTKQPIAHT-
             KK   NG EG+SR +P      GN              ASVPKFGSWD RDPKSGDGYTAIFNK+KIEKQI  S NPQ VPPLMN+TKQP+  T 
Subjt:  -----KKSKENGVEGISRLAPAVAGHGGN-------------PASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAAS-NPQAVPPLMNKTKQPIAHT-

Query:  ---NTTSGFTSFASKV
            +T G TSF SK+
Subjt:  ---NTTSGFTSFASKV

A0A5A7UH42 RPM1-interacting protein 4-like1.9e-5960.65Show/hide
Query:  MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGAVINSGSEKLSSERSGSDYALL--
        MAG  SS HVPKFGNWD+DDVPYTI FENAREL+AAG+TFDPNDPDTYPP VF        +H R    + + +R  ++NSGSEKLSSERS SDYALL  
Subjt:  MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGAVINSGSEKLSSERSGSDYALL--

Query:  -----KKSKENGVEGISRLAPAVAGHGGN-------------PASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAAS-NPQAVPPLMNKTKQPIAHT-
             KK   NG EG+SR +P      GN              ASVPKFGSWD RDPKSGDGYTAIFNK+KIEKQI  S NPQ VPPLMN+TKQP+  T 
Subjt:  -----KKSKENGVEGISRLAPAVAGHGGN-------------PASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAAS-NPQAVPPLMNKTKQPIAHT-

Query:  ---NTTSGFTSFASKV
            +T G TSF SKV
Subjt:  ---NTTSGFTSFASKV

A0A6J1CND0 RPM1-interacting protein 4-like2.4e-6264.68Show/hide
Query:  ANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGG--------EHQRRPRQQPNRERGAVINSGSEKLSSERSGSDY
        A SS HVPKFGNWDTDDVPYTICFENA ELRAAG+TFDPNDPDTYPPE F    H           +H RRPR+QPNR+R    +SGSEKLSSERSGSDY
Subjt:  ANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGG--------EHQRRPRQQPNRERGAVINSGSEKLSSERSGSDY

Query:  ALLK------KSKENGVEGISRLAPAVAGHGGNP--------------ASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASN-PQAVPPLMNKTK-Q
        +LLK      K   NGV+GISR  P  AGHGGNP              ASVPKFGSWDARDPKSGDGYTAIFNK+K+EK+I  SN  QAVPPL N+TK Q
Subjt:  ALLK------KSKENGVEGISRLAPAVAGHGGNP--------------ASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASN-PQAVPPLMNKTK-Q

Query:  PIAHTNTTSGFTSFASKV
        PI       G TSF SKV
Subjt:  PIAHTNTTSGFTSFASKV

A0A6J1GSU2 RPM1-interacting protein 4-like9.5e-10497.91Show/hide
Query:  MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGAVINSGSEKLSSERSGSDYALLKK
        MAGA SSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGA+INSGSEKLSSERSGSDYALLKK
Subjt:  MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGAVINSGSEKLSSERSGSDYALLKK

Query:  SKENGVEGISRLAPAVAGHGGNPASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASNPQAVPPLMNKTKQPIAHTNTTSGFTSFASKV
        SKENGVEGISRLAPAVAGHGGNPASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASNPQ+VPPLMNKTKQPIAHTNTTSGFTSFASK+
Subjt:  SKENGVEGISRLAPAVAGHGGNPASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASNPQAVPPLMNKTKQPIAHTNTTSGFTSFASKV

A0A6J1JVE9 RPM1-interacting protein 4-like5.4e-9993.33Show/hide
Query:  MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGAVINSGSEKLSSERSGSDYALLKK
        MAGANSS HVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKP AH+GGEHQRRPRQQPNRERGA++NSGSEKLSSERSGS+YALLKK
Subjt:  MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGAVINSGSEKLSSERSGSDYALLKK

Query:  SKENGVEGISRLAPAVAGHGGNP----ASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASNPQAVPPLMNKTKQPIAHTNTTSGFTSFASKV
        SKENGVEGISRLAPAVAGHG NP    ASVPKFGSWDA+DPKSGDGYTAIFNKMKIEKQIAASNPQAVPPLMNKTKQPIAHTNTTSGFTSFASK+
Subjt:  SKENGVEGISRLAPAVAGHGGNP----ASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASNPQAVPPLMNKTKQPIAHTNTTSGFTSFASKV

SwissProt top hitse value%identityAlignment
Q8GYN5 RPM1-interacting protein 42.2e-1233.17Show/hide
Query:  HVPKFGNWDTDD-VPYTICFENARELRAAGI-TFDPNDPD----------TYPPEV-FKPVAHD----GGEHQRRPRQQPNRERGAVINSGSE-------
        +VPKFGNW+ ++ VPYT  F+ AR+ RA G    +PNDP+           +PP    KP   D      EH R   +   ++ G    S +E       
Subjt:  HVPKFGNWDTDD-VPYTICFENARELRAAGI-TFDPNDPD----------TYPPEV-FKPVAHD----GGEHQRRPRQQPNRERGAVINSGSE-------

Query:  KLSSERSGSDYALLKKSKENGVEGISRLAPAVAGHGGNPAS---VPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAA--SNPQAVPPLMNKTKQPIAHTN
        + S   S  + + L K+  +G  G SR  P       +P     VPKFG WD  +P S DGYT IFNK++ E+   A  S     P     T Q   + N
Subjt:  KLSSERSGSDYALLKKSKENGVEGISRLAPAVAGHGGNPAS---VPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAA--SNPQAVPPLMNKTKQPIAHTN

Query:  TTSGFTSF
         TS    F
Subjt:  TTSGFTSF

Q8S3M3 NOI-like protein7.5e-0535.59Show/hide
Query:  HVPKFGNWDTDDVPYTICFENARELRAAGI-TFDPNDPDTYPPEVFKPVAHDGGEHQRR
        HVPKFGNWD +++ YT  FE     +  G   F+PNDP+  P   +        +H  +
Subjt:  HVPKFGNWDTDDVPYTICFENARELRAAGI-TFDPNDPDTYPPEVFKPVAHDGGEHQRR

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein7.7e-0556.67Show/hide
Query:  VPKFGSWDARDPKSGDGYTAIFNKMKIEKQ
        +PKFG WD  DP S +G+T IFNK + EK+
Subjt:  VPKFGSWDARDPKSGDGYTAIFNKMKIEKQ

AT3G07195.1 RPM1-interacting protein 4 (RIN4) family protein1.2e-0528.8Show/hide
Query:  HVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQR----------RPRQQPNRERGAV-------INSGSEKLSSERS
        HVPKFG+W+  D P+T+ F+NAR  +   +      P+T P E+  P        Q+           PR  P  E+  V       +  G       RS
Subjt:  HVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQR----------RPRQQPNRERGAV-------INSGSEKLSSERS

Query:  GSDYA-LLKKSKENGVEGISRLAPAV-----------AGHGGNPASVPKF-GSWDARDPKSGD-GYTAIFNKMKIEKQIAASNP
        GS  A  L      G  G  R  PA              +G    ++P F GS  A     GD  YT IF K+K E+      P
Subjt:  GSDYA-LLKKSKENGVEGISRLAPAV-----------AGHGGNPASVPKF-GSWDARDPKSGD-GYTAIFNKMKIEKQIAASNP

AT3G25070.1 RPM1 interacting protein 41.5e-1333.17Show/hide
Query:  HVPKFGNWDTDD-VPYTICFENARELRAAGI-TFDPNDPD----------TYPPEV-FKPVAHD----GGEHQRRPRQQPNRERGAVINSGSE-------
        +VPKFGNW+ ++ VPYT  F+ AR+ RA G    +PNDP+           +PP    KP   D      EH R   +   ++ G    S +E       
Subjt:  HVPKFGNWDTDD-VPYTICFENARELRAAGI-TFDPNDPD----------TYPPEV-FKPVAHD----GGEHQRRPRQQPNRERGAVINSGSE-------

Query:  KLSSERSGSDYALLKKSKENGVEGISRLAPAVAGHGGNPAS---VPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAA--SNPQAVPPLMNKTKQPIAHTN
        + S   S  + + L K+  +G  G SR  P       +P     VPKFG WD  +P S DGYT IFNK++ E+   A  S     P     T Q   + N
Subjt:  KLSSERSGSDYALLKKSKENGVEGISRLAPAVAGHGGNPAS---VPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAA--SNPQAVPPLMNKTKQPIAHTN

Query:  TTSGFTSF
         TS    F
Subjt:  TTSGFTSF

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein1.0e-0456.67Show/hide
Query:  VPKFGSWDARDPKSGDGYTAIFNKMKIEKQ
        +PKFG WD  DP S +G+T IFNK + EK+
Subjt:  VPKFGSWDARDPKSGDGYTAIFNKMKIEKQ

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein1.0e-0456.67Show/hide
Query:  VPKFGSWDARDPKSGDGYTAIFNKMKIEKQ
        +PKFG WD  DP S +G+T IFNK + EK+
Subjt:  VPKFGSWDARDPKSGDGYTAIFNKMKIEKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGGGCAAACTCGTCATTTCATGTTCCCAAATTCGGTAATTGGGACACCGACGATGTACCCTACACCATCTGTTTCGAAAACGCCCGAGAACTCCGAGCCGCCGG
CATCACCTTCGATCCCAACGATCCCGACACCTACCCACCGGAGGTCTTCAAGCCAGTCGCACACGACGGCGGAGAACACCAGCGGCGGCCACGCCAACAGCCAAATCGCG
AGCGGGGAGCGGTAATAAACTCCGGATCGGAGAAATTGAGCAGCGAGAGAAGCGGCTCCGATTACGCTCTTCTGAAGAAGAGTAAGGAAAATGGAGTGGAAGGAATCAGT
AGATTAGCTCCGGCGGTGGCCGGACATGGCGGAAACCCGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGCGAGGGATCCGAAATCGGGAGATGGGTATACGGCGATTTT
CAATAAAATGAAGATTGAGAAGCAAATTGCAGCTTCAAATCCTCAGGCAGTTCCGCCATTGATGAACAAAACCAAGCAACCCATAGCTCACACGAACACTACTAGTGGAT
TCACTTCATTTGCTTCCAAGGTACCCACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGGGCAAACTCGTCATTTCATGTTCCCAAATTCGGTAATTGGGACACCGACGATGTACCCTACACCATCTGTTTCGAAAACGCCCGAGAACTCCGAGCCGCCGG
CATCACCTTCGATCCCAACGATCCCGACACCTACCCACCGGAGGTCTTCAAGCCAGTCGCACACGACGGCGGAGAACACCAGCGGCGGCCACGCCAACAGCCAAATCGCG
AGCGGGGAGCGGTAATAAACTCCGGATCGGAGAAATTGAGCAGCGAGAGAAGCGGCTCCGATTACGCTCTTCTGAAGAAGAGTAAGGAAAATGGAGTGGAAGGAATCAGT
AGATTAGCTCCGGCGGTGGCCGGACATGGCGGAAACCCGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGCGAGGGATCCGAAATCGGGAGATGGGTATACGGCGATTTT
CAATAAAATGAAGATTGAGAAGCAAATTGCAGCTTCAAATCCTCAGGCAGTTCCGCCATTGATGAACAAAACCAAGCAACCCATAGCTCACACGAACACTACTAGTGGAT
TCACTTCATTTGCTTCCAAGGTACCCACCTAA
Protein sequenceShow/hide protein sequence
MAGANSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDGGEHQRRPRQQPNRERGAVINSGSEKLSSERSGSDYALLKKSKENGVEGIS
RLAPAVAGHGGNPASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAASNPQAVPPLMNKTKQPIAHTNTTSGFTSFASKVPT