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Carg28289 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28289
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSerine-rich protein-like protein
Genome locationCarg_Chr09:8998110..8998598
RNA-Seq ExpressionCarg28289
SyntenyCarg28289
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592260.1 hypothetical protein SDJN03_14606, partial [Cucurbita argyrosperma subsp. sororia]3.2e-8399.38Show/hide
Query:  MASFLGSNSPQVSSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNG
        MASFLGSNSPQVSSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNG
Subjt:  MASFLGSNSPQVSSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNG

Query:  SLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQE
        SLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQPTPSRLSVMSKA+QE
Subjt:  SLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQE

KAG7025104.1 hypothetical protein SDJN02_13927, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-83100Show/hide
Query:  MASFLGSNSPQVSSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNG
        MASFLGSNSPQVSSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNG
Subjt:  MASFLGSNSPQVSSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNG

Query:  SLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQE
        SLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQE
Subjt:  SLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQE

XP_022932809.1 uncharacterized protein LOC111439270 [Cucurbita moschata]1.1e-7895.73Show/hide
Query:  MASFLGSNSPQVSSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDG--NANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFS
        MASFLGSNSPQVSSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDG  NANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFS
Subjt:  MASFLGSNSPQVSSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDG--NANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFS

Query:  NGSLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQE
        NGSLDFRRSAM NSIARIGGVEGADLVKRAL ALIRPSSH LRPRSAFQP PSRLSVMSKA+QE
Subjt:  NGSLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQE

XP_022974019.1 uncharacterized protein LOC111472640 [Cucurbita maxima]1.7e-6381.99Show/hide
Query:  MASFLGSNSPQVSSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNG
        MASF+GSNSPQ+SS SS EIKFVGICGKYQID       RSISV+KNRD NAN N VSSNKRKW MCSPSTHP  FRCSLH KKSRHSVNA+NRSEF NG
Subjt:  MASFLGSNSPQVSSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNG

Query:  SLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQ
        SLDFRRSAM NSI RIGGVEGADLV RALSALIRPSSH LRPRSAFQP PSRLSVMSK+++
Subjt:  SLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQ

XP_023520830.1 uncharacterized protein LOC111784325 [Cucurbita pepo subsp. pepo]1.6e-7493.83Show/hide
Query:  MASFLGSNSPQVSSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNG
        MASFLGSNSPQVSSLSSLEIKFVGICG YQID RPASPGRSISVQKNRDGNAN  V SSNKRKW MCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNG
Subjt:  MASFLGSNSPQVSSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNG

Query:  SLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQE
        SLDFRRSAM NSIARIGGVEGADLVKRALSALIRPSSH LRPRSAFQP PSRLSVMSKA+QE
Subjt:  SLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQE

TrEMBL top hitse value%identityAlignment
A0A5D3E1W2 Serine-rich protein-like protein4.5e-3869.63Show/hide
Query:  KYQIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNGSLDFRRSAMKNSIARIGGVEGADLVKR
        ++QID R ASP RSISVQKNRD NA  N V SNKRK  +CSP+ HP SFRCSLH K S HSV+  N S+  NGSL+ RRSAM NS+ RIG VEGADLVKR
Subjt:  KYQIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNGSLDFRRSAMKNSIARIGGVEGADLVKR

Query:  ALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQE
        ALSALIRPSSH  R  SAFQ  PSRLS+MSKA++E
Subjt:  ALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQE

A0A6J1EY22 uncharacterized protein LOC1114392705.2e-7995.73Show/hide
Query:  MASFLGSNSPQVSSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDG--NANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFS
        MASFLGSNSPQVSSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDG  NANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFS
Subjt:  MASFLGSNSPQVSSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDG--NANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFS

Query:  NGSLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQE
        NGSLDFRRSAM NSIARIGGVEGADLVKRAL ALIRPSSH LRPRSAFQP PSRLSVMSKA+QE
Subjt:  NGSLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQE

A0A6J1GXB7 uncharacterized protein LOC1114580064.8e-4062.43Show/hide
Query:  ASFLGSNSPQVSSLS------------SLEIKFV--GICGKY-----------QIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASF
        AS +GS S Q+SS S             LE +F+   +CGKY           QID RPASPGRSISVQKNR+ NA  N VSSNK+KW MCSPSTHP SF
Subjt:  ASFLGSNSPQVSSLS------------SLEIKFV--GICGKY-----------QIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASF

Query:  RCSLHNKKSRHSVNALNR-SEFSNGSLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQP
        RCSLH K  R SVN +NR SEF NGSL+FRRSAM NSI R GGVEGADLVKRA  AL+RPSSH +R  SAFQP
Subjt:  RCSLHNKKSRHSVNALNR-SEFSNGSLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQP

A0A6J1IGA9 uncharacterized protein LOC1114726408.1e-6481.99Show/hide
Query:  MASFLGSNSPQVSSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNG
        MASF+GSNSPQ+SS SS EIKFVGICGKYQID       RSISV+KNRD NAN N VSSNKRKW MCSPSTHP  FRCSLH KKSRHSVNA+NRSEF NG
Subjt:  MASFLGSNSPQVSSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNG

Query:  SLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQ
        SLDFRRSAM NSI RIGGVEGADLV RALSALIRPSSH LRPRSAFQP PSRLSVMSK+++
Subjt:  SLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQ

A0A6J1IQC9 uncharacterized protein LOC1114795641.5e-4964.52Show/hide
Query:  MASFLGSNSPQVSSLS------------SLEIKFVGICGKY-----------QIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFR
        MAS +GS S Q+SS S            SL  K   +CGKY           QID RPASPGRSISVQKNR+ NA  N V  NK+KW MCSP THP SFR
Subjt:  MASFLGSNSPQVSSLS------------SLEIKFVGICGKY-----------QIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFR

Query:  CSLHNKKSRHSVNALNRS-EFSNGSLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQE
        CSLH K  R SVN +NRS EF NGSL+FRRSAM NSI RIGGVEGADLVKRAL+AL+RPSSH +R RSAFQP PSRLSVMSKA++E
Subjt:  CSLHNKKSRHSVNALNRS-EFSNGSLDFRRSAMKNSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G11090.1 serine-rich protein-related9.2e-2850.37Show/hide
Query:  KYQIDPRPASP-GRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNGSLDFRRSAMKNSIARIGGVEGADLVK
        +Y +D R  SP  +SISV KN+  + N  +      +  MCSP+THP SFRCSLH  K+  + +    + ++   L+ RRSAM NS+ RIGGVEG + V+
Subjt:  KYQIDPRPASP-GRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNGSLDFRRSAMKNSIARIGGVEGADLVK

Query:  RALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQ
        RAL+ LIRPSSHHL+ R+A+QP PSRLS+M+KAD+
Subjt:  RALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQ

AT5G20370.1 serine-rich protein-related1.5e-0944.14Show/hide
Query:  VSSN---KRKWWMCSPSTHPASFRCSLH----NKKSR----HSVNALNRSEFS---NGSLDFRRSAMKNSIARIGGVEGADLVKRALSA-LIRPSSHHLR
        VSSN   KRK  +CSP+THP SFRCS H    ++KS+     +V   NR + +   N  L+ R+ A+ NS+A+IG VE A+  +R+L+A L +PSS H  
Subjt:  VSSN---KRKWWMCSPSTHPASFRCSLH----NKKSR----HSVNALNRSEFS---NGSLDFRRSAMKNSIARIGGVEGADLVKRALSA-LIRPSSHHLR

Query:  PRSAFQPTPSR
         R  F+P  SR
Subjt:  PRSAFQPTPSR

AT5G25280.1 serine-rich protein-related3.9e-2649.62Show/hide
Query:  KYQIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNGSLDFRRSAMKNSIARIGGVEGADLVKR
        +Y ID R  SP RSI+V  N+  N ++     + R+  MCSP+THP SFRCSLH  K+  + +    + ++   L+ RRSAM NS+ RIGGVEG + V+R
Subjt:  KYQIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNGSLDFRRSAMKNSIARIGGVEGADLVKR

Query:  ALSALIRPSSHHLRPRSAFQPTPSRLSVMSKAD
        AL+ LIRPSSH L+ RSA++P  SRL+ MSKA+
Subjt:  ALSALIRPSSHHLRPRSAFQPTPSRLSVMSKAD

AT5G25280.2 serine-rich protein-related3.9e-2649.62Show/hide
Query:  KYQIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNGSLDFRRSAMKNSIARIGGVEGADLVKR
        +Y ID R  SP RSI+V  N+  N ++     + R+  MCSP+THP SFRCSLH  K+  + +    + ++   L+ RRSAM NS+ RIGGVEG + V+R
Subjt:  KYQIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNGSLDFRRSAMKNSIARIGGVEGADLVKR

Query:  ALSALIRPSSHHLRPRSAFQPTPSRLSVMSKAD
        AL+ LIRPSSH L+ RSA++P  SRL+ MSKA+
Subjt:  ALSALIRPSSHHLRPRSAFQPTPSRLSVMSKAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTCCTCGGCTCCAACTCTCCACAAGTTTCATCTCTGTCGTCGTTGGAGATCAAATTTGTCGGAATCTGCGGAAAATATCAGATTGATCCAAGGCCGGCATC
TCCCGGCCGTTCGATTTCGGTTCAGAAGAATCGCGACGGAAATGCGAATGAGAATGTGGTATCGTCGAATAAGAGGAAATGGTGGATGTGTTCTCCGTCTACTCATCCAG
CCTCTTTCCGGTGTTCGCTCCACAACAAGAAGTCGAGGCACTCTGTTAATGCCCTGAATCGCAGCGAGTTCTCCAACGGATCGTTGGATTTTCGTAGATCGGCAATGAAG
AATTCGATTGCCAGAATCGGAGGCGTGGAAGGTGCCGATCTCGTGAAGAGAGCTTTATCGGCTTTGATTAGGCCTTCTTCGCATCACCTGCGGCCGCGATCAGCGTTTCA
ACCTACGCCTAGCCGTCTATCAGTCATGTCAAAAGCAGATCAGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTTCCTCGGCTCCAACTCTCCACAAGTTTCATCTCTGTCGTCGTTGGAGATCAAATTTGTCGGAATCTGCGGAAAATATCAGATTGATCCAAGGCCGGCATC
TCCCGGCCGTTCGATTTCGGTTCAGAAGAATCGCGACGGAAATGCGAATGAGAATGTGGTATCGTCGAATAAGAGGAAATGGTGGATGTGTTCTCCGTCTACTCATCCAG
CCTCTTTCCGGTGTTCGCTCCACAACAAGAAGTCGAGGCACTCTGTTAATGCCCTGAATCGCAGCGAGTTCTCCAACGGATCGTTGGATTTTCGTAGATCGGCAATGAAG
AATTCGATTGCCAGAATCGGAGGCGTGGAAGGTGCCGATCTCGTGAAGAGAGCTTTATCGGCTTTGATTAGGCCTTCTTCGCATCACCTGCGGCCGCGATCAGCGTTTCA
ACCTACGCCTAGCCGTCTATCAGTCATGTCAAAAGCAGATCAGGAGTAG
Protein sequenceShow/hide protein sequence
MASFLGSNSPQVSSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDGNANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNGSLDFRRSAMK
NSIARIGGVEGADLVKRALSALIRPSSHHLRPRSAFQPTPSRLSVMSKADQE