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Carg28290 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28290
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCLAVATA3/ESR (CLE)-related protein 27
Genome locationCarg_Chr04:15218410..15218676
RNA-Seq ExpressionCarg28290
SyntenyCarg28290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063931.1 putative Clavata3/esr-related 43 [Cucumis melo var. makuwa]4.7e-1249.41Show/hide
Query:  GVTPTRQRRFLSTLLVMALFIWVVFCHQPGAVSARLFPENLIPEETHVGGGGGSKEKLLRKYFNGMRGFEDNKRTVPSCPDPLHN
        G TP+R+RR LS   ++  FIWVV  +Q  +  AR   E+  P+     G  GSKEK       G R FE+NKRTVPSCPDPLHN
Subjt:  GVTPTRQRRFLSTLLVMALFIWVVFCHQPGAVSARLFPENLIPEETHVGGGGGSKEKLLRKYFNGMRGFEDNKRTVPSCPDPLHN

KAG6579278.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]4.7e-2058.7Show/hide
Query:  GGVTPTRQRRFLSTLLVMALFIWVVFCH--QPGAVSARLFPENLIPEETHVGGGGGSKEKLLRKYFN----GMRGFEDNKRTVPSCPDPLHN
        G   P R+RRFLS+  ++  FIWVVFCH        AR FP N  PE++ V GG GSKEKLLR YFN    G RGF++ KRTVPSCPDPLHN
Subjt:  GGVTPTRQRRFLSTLLVMALFIWVVFCH--QPGAVSARLFPENLIPEETHVGGGGGSKEKLLRKYFN----GMRGFEDNKRTVPSCPDPLHN

KAG6601785.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]2.5e-45100Show/hide
Query:  MCGGVTPTRQRRFLSTLLVMALFIWVVFCHQPGAVSARLFPENLIPEETHVGGGGGSKEKLLRKYFNGMRGFEDNKRTVPSCPDPLHN
        MCGGVTPTRQRRFLSTLLVMALFIWVVFCHQPGAVSARLFPENLIPEETHVGGGGGSKEKLLRKYFNGMRGFEDNKRTVPSCPDPLHN
Subjt:  MCGGVTPTRQRRFLSTLLVMALFIWVVFCHQPGAVSARLFPENLIPEETHVGGGGGSKEKLLRKYFNGMRGFEDNKRTVPSCPDPLHN

KAG7016789.1 hypothetical protein SDJN02_21899, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-2058.7Show/hide
Query:  GGVTPTRQRRFLSTLLVMALFIWVVFCH--QPGAVSARLFPENLIPEETHVGGGGGSKEKLLRKYFN----GMRGFEDNKRTVPSCPDPLHN
        G   P R+RRFLS+  ++  FIWVVFCH        AR FP N  PE++ V GG GSKEKLLR YFN    G RGF++ KRTVPSCPDPLHN
Subjt:  GGVTPTRQRRFLSTLLVMALFIWVVFCH--QPGAVSARLFPENLIPEETHVGGGGGSKEKLLRKYFN----GMRGFEDNKRTVPSCPDPLHN

XP_040998166.1 CLAVATA3/ESR (CLE)-related protein 27-like [Juglans microcarpa x Juglans regia]1.1e-0845.83Show/hide
Query:  TRQRRFLSTLL------VMALFIWVVFCHQPGAVSARLFPENLIPEETHVGG--GGG-----SKEKLLRKYFNGM--RGFEDNKRTVPSCPDPLHN
        +R+  F +TLL      V+ +++W  +  Q GA+  R+ P N I +   VGG  GGG     SKE L+RK+FNG     FE+NKR VPSCPDPLHN
Subjt:  TRQRRFLSTLL------VMALFIWVVFCHQPGAVSARLFPENLIPEETHVGG--GGG-----SKEKLLRKYFNGM--RGFEDNKRTVPSCPDPLHN

TrEMBL top hitse value%identityAlignment
A0A2C9UKL3 Uncharacterized protein8.4e-0740.4Show/hide
Query:  RQRRFLSTLLVMALF------IWVVFCHQPGAVSARLFPE-----NLIPEETHVGGGGGSKEKLLRKYFNG--------MRGFEDNKRTVPSCPDPLHN
        R   + S+LLV+ +F      IWV  C    A + R+FP+     NL            SKE L  K+FNG         +GFE+NKR VPSCPDPLHN
Subjt:  RQRRFLSTLLVMALF------IWVVFCHQPGAVSARLFPE-----NLIPEETHVGGGGGSKEKLLRKYFNG--------MRGFEDNKRTVPSCPDPLHN

A0A2C9VNI0 Uncharacterized protein2.2e-0742.05Show/hide
Query:  LSTLLVMALFIWVVFCHQPGAVSARLFPENLIPEETH-----VGGGGGSKEKLLRKYFNG--------MRGFEDNKRTVPSCPDPLHN
        L   L+  L IWV  C    A + R+FP+N +P +             +K+ LLRK+FNG         +GFE+NKR VPSCPDPLHN
Subjt:  LSTLLVMALFIWVVFCHQPGAVSARLFPENLIPEETH-----VGGGGGSKEKLLRKYFNG--------MRGFEDNKRTVPSCPDPLHN

A0A2I4HTU3 CLAVATA3/ESR (CLE)-related protein 272.0e-0844.79Show/hide
Query:  TRQRRFLSTLL------VMALFIWVVFCHQPGAVSARLFPENLIPEETHVGG--GGG-----SKEKLLRKYFNGM--RGFEDNKRTVPSCPDPLHN
        +R+  F +TLL      V+ +++W  +  Q GA+  R+ P + I +   VGG  GGG     SKE L+RK+FNG     FE+NKR VPSCPDPLHN
Subjt:  TRQRRFLSTLL------VMALFIWVVFCHQPGAVSARLFPENLIPEETHVGG--GGG-----SKEKLLRKYFNGM--RGFEDNKRTVPSCPDPLHN

A0A5A7VDX3 Putative Clavata3/esr-related 432.3e-1249.41Show/hide
Query:  GVTPTRQRRFLSTLLVMALFIWVVFCHQPGAVSARLFPENLIPEETHVGGGGGSKEKLLRKYFNGMRGFEDNKRTVPSCPDPLHN
        G TP+R+RR LS   ++  FIWVV  +Q  +  AR   E+  P+     G  GSKEK       G R FE+NKRTVPSCPDPLHN
Subjt:  GVTPTRQRRFLSTLLVMALFIWVVFCHQPGAVSARLFPENLIPEETHVGGGGGSKEKLLRKYFNGMRGFEDNKRTVPSCPDPLHN

A0A6A1W705 CLAVATA3/ESR (CLE)-related protein 438.4e-0744.05Show/hide
Query:  LLVMALFIWVVFCHQPGAVSARLFPENLIPEETHVGGGGG----SKEKLLRKYFNG--------MRGFEDNKRTVPSCPDPLHN
        L++  L IWV   +   A + R+ P N   + T  G  G     +KE+LLRKYFNG          GFE++KR VPSCPDPLHN
Subjt:  LLVMALFIWVVFCHQPGAVSARLFPENLIPEETHVGGGGG----SKEKLLRKYFNG--------MRGFEDNKRTVPSCPDPLHN

SwissProt top hitse value%identityAlignment
Q9LUA1 CLAVATA3/ESR (CLE)-related protein 277.6e-0532.97Show/hide
Query:  RRFLSTLLVMAL---FIWVVFCHQPGAVSARLFPENLIPEETHVGGGGGSKEKLLRKYFNG----------MRGFEDNKRTVPSCPDPLHN
        R  L+T L+M +   ++  +FC      + R+FPE           G   +E L++KYF             +G  ++KR VPSCPDPLHN
Subjt:  RRFLSTLLVMAL---FIWVVFCHQPGAVSARLFPENLIPEETHVGGGGGSKEKLLRKYFNG----------MRGFEDNKRTVPSCPDPLHN

Arabidopsis top hitse value%identityAlignment
AT3G25905.1 CLAVATA3/ESR-RELATED 275.4e-0632.97Show/hide
Query:  RRFLSTLLVMAL---FIWVVFCHQPGAVSARLFPENLIPEETHVGGGGGSKEKLLRKYFNG----------MRGFEDNKRTVPSCPDPLHN
        R  L+T L+M +   ++  +FC      + R+FPE           G   +E L++KYF             +G  ++KR VPSCPDPLHN
Subjt:  RRFLSTLLVMAL---FIWVVFCHQPGAVSARLFPENLIPEETHVGGGGGSKEKLLRKYFNG----------MRGFEDNKRTVPSCPDPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCGGCGGCGTCACTCCGACCCGACAGCGCCGATTTCTCTCTACTCTCTTGGTTATGGCTTTATTCATCTGGGTCGTCTTCTGCCACCAACCCGGCGCCGTCTCTGC
TAGACTCTTCCCGGAGAATCTAATTCCAGAGGAAACCCACGTGGGCGGCGGTGGAGGAAGCAAGGAGAAGCTGCTCCGGAAGTATTTCAATGGAATGAGAGGGTTCGAAG
ACAACAAACGAACAGTCCCCAGCTGCCCGGATCCTCTGCACAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGCGGCGGCGTCACTCCGACCCGACAGCGCCGATTTCTCTCTACTCTCTTGGTTATGGCTTTATTCATCTGGGTCGTCTTCTGCCACCAACCCGGCGCCGTCTCTGC
TAGACTCTTCCCGGAGAATCTAATTCCAGAGGAAACCCACGTGGGCGGCGGTGGAGGAAGCAAGGAGAAGCTGCTCCGGAAGTATTTCAATGGAATGAGAGGGTTCGAAG
ACAACAAACGAACAGTCCCCAGCTGCCCGGATCCTCTGCACAACTAG
Protein sequenceShow/hide protein sequence
MCGGVTPTRQRRFLSTLLVMALFIWVVFCHQPGAVSARLFPENLIPEETHVGGGGGSKEKLLRKYFNGMRGFEDNKRTVPSCPDPLHN