; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G001020 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G001020
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionCaspase recruitment domain family
Genome locationCicolChr01:777978..778767
RNA-Seq ExpressionCcUC01G001020
SyntenyCcUC01G001020
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER51041.1 caspase recruitment domain family [Striga asiatica]3.4e-0959.09Show/hide
Query:  IPPDISLPRAMPAESGEMQVRRRMTRSSVGIPNLIPYWSHPLLTAMQSSPETIKQSSIRVLEQESV
        +PPDISLPRAM AE GE  V   M R SVGIP  +PY SHPL TA QSSP+ +    +R+ E ESV
Subjt:  IPPDISLPRAMPAESGEMQVRRRMTRSSVGIPNLIPYWSHPLLTAMQSSPETIKQSSIRVLEQESV

MCI33609.1 hypothetical protein [Trifolium medium]5.0e-0551.56Show/hide
Query:  PPDISLPRAMPAESGEMQVRRRMTRSSVGIPNLIPYWSHPLLTAMQSSPETIKQSSIRVLEQES
        PPD SLP A+PA +G+  V RRM    +G P  IPY SHPL TA +SSP  + +SS+   E ES
Subjt:  PPDISLPRAMPAESGEMQVRRRMTRSSVGIPNLIPYWSHPLLTAMQSSPETIKQSSIRVLEQES

TrEMBL top hitse value%identityAlignment
A0A0A9L2M0 Uncharacterized protein2.2e-0651.43Show/hide
Query:  TADCVLIPVTFSILTLRIPPDISLPRAMPAESGEMQVRRRMTRSSVGIPNLIPYWSHPLLTAMQSSPETI
        T D  L  V  S  T  +PPDISLP A+ A  G+  VRRR+T   +G+P  +PY S PLL A QSSPET+
Subjt:  TADCVLIPVTFSILTLRIPPDISLPRAMPAESGEMQVRRRMTRSSVGIPNLIPYWSHPLLTAMQSSPETI

A0A0A9Q235 Uncharacterized protein4.6e-0446.25Show/hide
Query:  FTKPPLPRAVLILTADCVLIPVTFSILTLRIPPDISLPRAMPAESGEMQVRRRMTRSSVGIPNLIPYWSHPLLTAMQSSP
        FT PP P AVLIL     L     S  T  +PPDISLP+A+PA      V   M    +G  N +PY SHPLL  + SSP
Subjt:  FTKPPLPRAVLILTADCVLIPVTFSILTLRIPPDISLPRAMPAESGEMQVRRRMTRSSVGIPNLIPYWSHPLLTAMQSSP

A0A2P2IJP3 Uncharacterized protein1.1e-0866.13Show/hide
Query:  VTFSILTLRIPPDISLPRAMPAESGEMQVRRRMTRSSVGIPNLIPYWSHPLLTAMQSSPETI
        V  S LT  IPPDISLP A+ A SGEMQV   MT   VGIP  IPY S P LTA QSSPETI
Subjt:  VTFSILTLRIPPDISLPRAMPAESGEMQVRRRMTRSSVGIPNLIPYWSHPLLTAMQSSPETI

A0A3Q7G2T5 Uncharacterized protein2.0e-1576.92Show/hide
Query:  IPPDISLPRAMPAESGEMQVRRRMTRSSVGIPNLIPYWSHPLLTAMQSSPETIKQSSIRVLEQES
        +PPDISLPRAM A SG+MQVR  M R  VGIPN IPY S PL TAMQSSPET+KQSSI VLEQES
Subjt:  IPPDISLPRAMPAESGEMQVRRRMTRSSVGIPNLIPYWSHPLLTAMQSSPETIKQSSIRVLEQES

A0A5A7R430 Caspase recruitment domain family1.6e-0959.09Show/hide
Query:  IPPDISLPRAMPAESGEMQVRRRMTRSSVGIPNLIPYWSHPLLTAMQSSPETIKQSSIRVLEQESV
        +PPDISLPRAM AE GE  V   M R SVGIP  +PY SHPL TA QSSP+ +    +R+ E ESV
Subjt:  IPPDISLPRAMPAESGEMQVRRRMTRSSVGIPNLIPYWSHPLLTAMQSSPETIKQSSIRVLEQESV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAACGAAAAATTCAAAGGCTTCACTTGAAGGCAGGATTTTTAACAAAGCAAGTCTTCAACTGAACCTTCTCAATCGGCAGTTGATCCTCAGGAAAGGAACATC
CGCCACTTTTCGCCGCCTTCGCCAGCGGAGCACACGGCGGCGGCACCACATCGCTACTGTATCCCTCAACGTCCGTACAGTTCCACTGCAACTTTTTAGGCTTCGCCGTC
AGTCCAATCTTCACATTCGAAATACAAATATCGGTGAACGGATCTCCCGAGATCCCCTCCAATCTCGCCGATTTCCAGTCATCCAGAAGACGTATTTCATTGTCGATAGA
TACATTCCTCGGACGAAGATGTCCTTCACGAAACCGCCTCTTCCGCGAGCGGTTTTGATTCTCACAGCGGATTGTGTATTGATTCCTGTGACGTTTTCGATCCTGACGTT
GCGAATTCCGCCGGACATCTCGCTGCCGAGGGCAATGCCGGCGGAATCCGGTGAGATGCAGGTGAGGCGGCGAATGACTAGGTCTTCAGTCGGCATTCCGAATTTGATAC
CGTATTGGTCCCATCCGCTCTTGACGGCGATGCAGTCGTCGCCGGAGACGATAAAGCAGTCTTCGATTCGAGTGTTGGAGCAGGAATCTGTGAAATTGAGTGAAGAATTA
GGGAAAGGGAATGATGAAGAAGAAAAGCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAACGAAAAATTCAAAGGCTTCACTTGAAGGCAGGATTTTTAACAAAGCAAGTCTTCAACTGAACCTTCTCAATCGGCAGTTGATCCTCAGGAAAGGAACATC
CGCCACTTTTCGCCGCCTTCGCCAGCGGAGCACACGGCGGCGGCACCACATCGCTACTGTATCCCTCAACGTCCGTACAGTTCCACTGCAACTTTTTAGGCTTCGCCGTC
AGTCCAATCTTCACATTCGAAATACAAATATCGGTGAACGGATCTCCCGAGATCCCCTCCAATCTCGCCGATTTCCAGTCATCCAGAAGACGTATTTCATTGTCGATAGA
TACATTCCTCGGACGAAGATGTCCTTCACGAAACCGCCTCTTCCGCGAGCGGTTTTGATTCTCACAGCGGATTGTGTATTGATTCCTGTGACGTTTTCGATCCTGACGTT
GCGAATTCCGCCGGACATCTCGCTGCCGAGGGCAATGCCGGCGGAATCCGGTGAGATGCAGGTGAGGCGGCGAATGACTAGGTCTTCAGTCGGCATTCCGAATTTGATAC
CGTATTGGTCCCATCCGCTCTTGACGGCGATGCAGTCGTCGCCGGAGACGATAAAGCAGTCTTCGATTCGAGTGTTGGAGCAGGAATCTGTGAAATTGAGTGAAGAATTA
GGGAAAGGGAATGATGAAGAAGAAAAGCCCTAA
Protein sequenceShow/hide protein sequence
MEETKNSKASLEGRIFNKASLQLNLLNRQLILRKGTSATFRRLRQRSTRRRHHIATVSLNVRTVPLQLFRLRRQSNLHIRNTNIGERISRDPLQSRRFPVIQKTYFIVDR
YIPRTKMSFTKPPLPRAVLILTADCVLIPVTFSILTLRIPPDISLPRAMPAESGEMQVRRRMTRSSVGIPNLIPYWSHPLLTAMQSSPETIKQSSIRVLEQESVKLSEEL
GKGNDEEEKP