; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G001460 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G001460
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr01:1276572..1276931
RNA-Seq ExpressionCcUC01G001460
SyntenyCcUC01G001460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579597.1 hypothetical protein SDJN03_24045, partial [Cucurbita argyrosperma subsp. sororia]2.9e-1260.26Show/hide
Query:  KIPKRNDRKTLLDLGLQIGDRNGDQRGAGAFSEEDVASRTLEGRISVVLRRELEEAKVGGEKLQLEEDCGEEMEDLRA
        KIPK +D + +LD GLQI  RNGDQR AGA  EE+V  R LEGR+ +VLRR LEEA       + E+D GEEMEDLRA
Subjt:  KIPKRNDRKTLLDLGLQIGDRNGDQRGAGAFSEEDVASRTLEGRISVVLRRELEEAKVGGEKLQLEEDCGEEMEDLRA
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCAATTTGGGAGCTCTCTCATCGTCTCCGATCTCTCCATTTCACACAAACATATCGTACAATTCCGATCCTCTTCACCATCTTCAGTTCCCCCAATTTC
CATCCCCTGTTTCGCAACAAAATCCCTAAACGCAACGATCGGAAGACTCTTCTTGATCTTGGCCTGCAAATCGGCGACCGGAACGGTGACCAGCGAGGGGCAGGG
GCCTTCAGTGAGGAAGACGTAGCTAGTCGGACGCTCGAAGGGAGAATCAGCGTTGTGCTCCGGCGAGAGCTTGAGGAGGCCAAAGTGGGCGGCGAGAAGCTTCAA
TTGGAGGAGGATTGTGGTGAAGAAATGGAGGATTTGAGAGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCAATTTGGGAGCTCTCTCATCGTCTCCGATCTCTCCATTTCACACAAACATATCGTACAATTCCGATCCTCTTCACCATCTTCAGTTCCCCCAATTTC
CATCCCCTGTTTCGCAACAAAATCCCTAAACGCAACGATCGGAAGACTCTTCTTGATCTTGGCCTGCAAATCGGCGACCGGAACGGTGACCAGCGAGGGGCAGGG
GCCTTCAGTGAGGAAGACGTAGCTAGTCGGACGCTCGAAGGGAGAATCAGCGTTGTGCTCCGGCGAGAGCTTGAGGAGGCCAAAGTGGGCGGCGAGAAGCTTCAA
TTGGAGGAGGATTGTGGTGAAGAAATGGAGGATTTGAGAGCGTAA
Protein sequenceShow/hide protein sequence
MAAIWELSHRLRSLHFTQTYRTIPILFTIFSSPNFHPLFRNKIPKRNDRKTLLDLGLQIGDRNGDQRGAGAFSEEDVASRTLEGRISVVLRRELEEAKVGGEKLQ
LEEDCGEEMEDLRA