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CcUC01G002080 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G002080
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionMyb-like domain-containing protein
Genome locationCicolChr01:1939351..1939822
RNA-Seq ExpressionCcUC01G002080
SyntenyCcUC01G002080
Gene Ontology termsGO:0009913 - epidermal cell differentiation (biological process)
GO:0010063 - positive regulation of trichoblast fate specification (biological process)
GO:0010376 - stomatal complex formation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146038.1 transcription factor CPC-like isoform X2 [Momordica charantia]7.2e-2772.34Show/hide
Query:  METKAKKTAKQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHGS
        ME +AKK  KQP+KQSKSRNSSSE              +VTSLEW+++QISEQEEDLI RMH+LVGDRWDLIAGRIPGRTAVEIERFWILKH S
Subjt:  METKAKKTAKQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHGS

XP_023912293.1 transcription factor CPC-like isoform X1 [Quercus suber]2.1e-1857.14Show/hide
Query:  KQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHG
        K+PRKQ+K+R+S+SE              +V+S+EW+ ++++EQEEDLI RM+RLVGDRWDLIAGRIPGR   +IERFWI++HG
Subjt:  KQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHG

XP_038680402.1 transcription factor CPC-like [Tripterygium wilfordii]5.0e-2059.52Show/hide
Query:  KQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHG
        K+PRKQ+K+R+++SE              +V+S+EWE ++++EQEEDLI+RMHRLVGD+WDLIAGRIPGR A EIERFWI++HG
Subjt:  KQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHG

XP_038725413.1 transcription factor CPC-like [Tripterygium wilfordii]7.3e-1958.33Show/hide
Query:  KQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHG
        K+PRKQ+K+R+++SE              +V+S+EWE V+++EQEEDLI+RM+RLVGD+WDLIAGRIPGR   EIERFWI++HG
Subjt:  KQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHG

XP_038874276.1 transcription factor CPC-like [Benincasa hispida]2.7e-2975.53Show/hide
Query:  METKAKKTAKQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHGS
        ME +AKKTAKQP+KQSK R S+SE              +VTSLEWEV+QIS+QEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHGS
Subjt:  METKAKKTAKQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHGS

TrEMBL top hitse value%identityAlignment
A0A061G715 Homeodomain-like superfamily protein3.0e-1855.95Show/hide
Query:  KQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHG
        ++P+KQ+K   S+SE              +V+S+EWE ++++EQEEDL++R++RLVGDRWDLIAGRIPGRTA EIERFWI++HG
Subjt:  KQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHG

A0A2I4E811 transcription factor CPC-like3.9e-1855.95Show/hide
Query:  KQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHG
        K+PRKQ+KS  SS+               +V+S+EWE ++++EQEEDLI RM++LVGDRWDLIAGR+PGR   EIERFWI++HG
Subjt:  KQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHG

A0A4V6A0D9 Transcription factor TRY-like1.3e-1860.24Show/hide
Query:  KQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKH
        ++ RKQ+K  NS SE              +V+S+EWE + +SEQEEDLIHRM+RLVG+RWDLIAGRIPGR A EIERFWI+KH
Subjt:  KQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKH

A0A654F2G6 SANT domain-containing protein3.0e-1855.56Show/hide
Query:  KAKKTAKQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHG
        KA+K  K+ R+QSK++ S SE              +V+S+EWE V++SE+EEDLI RM++LVGDRW+LIAGRIPGRT  EIER+W++KHG
Subjt:  KAKKTAKQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHG

A0A6J1CXI2 transcription factor CPC-like isoform X23.5e-2772.34Show/hide
Query:  METKAKKTAKQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHGS
        ME +AKK  KQP+KQSKSRNSSSE              +VTSLEW+++QISEQEEDLI RMH+LVGDRWDLIAGRIPGRTAVEIERFWILKH S
Subjt:  METKAKKTAKQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHGS

SwissProt top hitse value%identityAlignment
B3H4X8 MYB-like transcription factor TCL23.5e-1664.81Show/hide
Query:  KVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKH
        +V S++WE + ++EQEEDLI RMHRLVGDRWDLIAGR+ GR A +IER+WI+++
Subjt:  KVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKH

O22059 Transcription factor CPC8.1e-2155.56Show/hide
Query:  KAKKTAKQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHG
        KA+K  K+ R+QSK++ S SE              +V+S+EWE V++SE+EEDLI RM++LVGDRW+LIAGRIPGRT  EIER+W++KHG
Subjt:  KAKKTAKQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHG

Q8GV05 Transcription factor TRY5.4e-1766.67Show/hide
Query:  KVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKH
        +V+S+EWE + ++EQEEDLI RM+RLVGDRWDLIAGR+PGR   EIER+WI+++
Subjt:  KVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKH

Q9LNI5 MYB-like transcription factor ETC13.2e-1768.52Show/hide
Query:  KVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKH
        +V+SLEWE + ++++EEDLI RM++LVG+RWDLIAGRIPGRTA EIERFW++K+
Subjt:  KVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKH

Q9M157 MYB-like transcription factor ETC35.8e-1954.65Show/hide
Query:  KTAKQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKH
        +  KQP+  S   +SS E               V+SLEWEVV +S++EEDL+ RMH+LVGDRW+LIAGRIPGRTA EIERFW++K+
Subjt:  KTAKQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKH

Arabidopsis top hitse value%identityAlignment
AT1G01380.1 Homeodomain-like superfamily protein2.3e-1868.52Show/hide
Query:  KVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKH
        +V+SLEWE + ++++EEDLI RM++LVG+RWDLIAGRIPGRTA EIERFW++K+
Subjt:  KVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKH

AT2G46410.1 Homeodomain-like superfamily protein5.7e-2255.56Show/hide
Query:  KAKKTAKQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHG
        KA+K  K+ R+QSK++ S SE              +V+S+EWE V++SE+EEDLI RM++LVGDRW+LIAGRIPGRT  EIER+W++KHG
Subjt:  KAKKTAKQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHG

AT4G01060.1 CAPRICE-like MYB31.8e-2056.98Show/hide
Query:  KTAKQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKH
        +  KQP K +    SSSEG             +V+SLEWEVV +S++EEDL+ RMH+LVGDRW+LIAGRIPGRTA EIERFW++K+
Subjt:  KTAKQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKH

AT4G01060.2 CAPRICE-like MYB32.4e-2074.07Show/hide
Query:  KVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKH
        +V+SLEWEVV +S++EEDL+ RMH+LVGDRW+LIAGRIPGRTA EIERFW++K+
Subjt:  KVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKH

AT4G01060.3 CAPRICE-like MYB34.1e-2054.65Show/hide
Query:  KTAKQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKH
        +  KQP+  S   +SS E               V+SLEWEVV +S++EEDL+ RMH+LVGDRW+LIAGRIPGRTA EIERFW++K+
Subjt:  KTAKQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACCAAAGCTAAGAAGACTGCAAAACAGCCACGAAAACAGTCCAAGAGCAGGAACTCGAGCTCGGAAGGTGTCTTGATTTTTCTGGTTTTTCTGCCATGGCTACT
GAGAAAAGTTACCAGTTTGGAATGGGAGGTCGTTCAAATCAGTGAGCAGGAGGAGGATCTCATTCATAGAATGCACAGACTTGTTGGAGACAGGTGGGATTTGATCGCGG
GACGAATTCCAGGACGAACTGCAGTAGAAATTGAGAGGTTTTGGATATTGAAACATGGTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACCAAAGCTAAGAAGACTGCAAAACAGCCACGAAAACAGTCCAAGAGCAGGAACTCGAGCTCGGAAGGTGTCTTGATTTTTCTGGTTTTTCTGCCATGGCTACT
GAGAAAAGTTACCAGTTTGGAATGGGAGGTCGTTCAAATCAGTGAGCAGGAGGAGGATCTCATTCATAGAATGCACAGACTTGTTGGAGACAGGTGGGATTTGATCGCGG
GACGAATTCCAGGACGAACTGCAGTAGAAATTGAGAGGTTTTGGATATTGAAACATGGTTCCTGA
Protein sequenceShow/hide protein sequence
METKAKKTAKQPRKQSKSRNSSSEGVLIFLVFLPWLLRKVTSLEWEVVQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHGS