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CcUC01G003190 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G003190
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr01:3051302..3051709
RNA-Seq ExpressionCcUC01G003190
SyntenyCcUC01G003190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579486.1 hypothetical protein SDJN03_23934, partial [Cucurbita argyrosperma subsp. sororia]1.3e-0842.34Show/hide
Query:  IFFLLFLLSLFSFHFLSIAASFHV---HKNGLTVSSDDDNDWEFVMNPNTFSSRIWIGNNTTFDEFGQRDKCRTLDCDGGNFLQSRAYVDRGG-GSLFRW
        +FFLLFLL LFSFHF S AAS       +N   + +D++N   F ++P++  S I +GN                D DG    Q+ +Y D  G GSL  W
Subjt:  IFFLLFLLSLFSFHFLSIAASFHV---HKNGLTVSSDDDNDWEFVMNPNTFSSRIWIGNNTTFDEFGQRDKCRTLDCDGGNFLQSRAYVDRGG-GSLFRW

Query:  RA--YADDIVKYVSNKLNNNVGSSNSLVKLLLFVLVL
        RA  Y++DI KYVSN+LNN   ++++LVK++LFVLV+
Subjt:  RA--YADDIVKYVSNKLNNNVGSSNSLVKLLLFVLVL

KAG6579487.1 hypothetical protein SDJN03_23935, partial [Cucurbita argyrosperma subsp. sororia]4.9e-0843.75Show/hide
Query:  MGTSI-FFLLFLLSLFSFHFLSIAA---SFHVHKNGLTVSSDDDNDWEFVMNPNTFSSRIWIGNNTTFDEFGQRDKCRTLDCDGGNFLQSRAYVDRGGGS
        MG SI  FL+FLL LFSFH  S AA   +    +  L + SD DN+W FV++P++ SS I +G                   D G  LQ +AYVDRG GS
Subjt:  MGTSI-FFLLFLLSLFSFHFLSIAA---SFHVHKNGLTVSSDDDNDWEFVMNPNTFSSRIWIGNNTTFDEFGQRDKCRTLDCDGGNFLQSRAYVDRGGGS

Query:  LFRWRAYADDIV
        L RWRAY D ++
Subjt:  LFRWRAYADDIV

KAG6579489.1 hypothetical protein SDJN03_23937, partial [Cucurbita argyrosperma subsp. sororia]9.8e-0942.34Show/hide
Query:  IFFLLFLLSLFSFHFLSIAASFHV---HKNGLTVSSDDDNDWEFVMNPNTFSSRIWIGNNTTFDEFGQRDKCRTLDCDGGNFLQSRAYVDRGG-GSLFRW
        +FFLLFLL LFSFHF S AAS       +N   + +D++N   F ++P++  S I +G               T D DG    Q+ +Y D  G GSL  W
Subjt:  IFFLLFLLSLFSFHFLSIAASFHV---HKNGLTVSSDDDNDWEFVMNPNTFSSRIWIGNNTTFDEFGQRDKCRTLDCDGGNFLQSRAYVDRGG-GSLFRW

Query:  RA--YADDIVKYVSNKLNNNVGSSNSLVKLLLFVLVL
        RA  Y++DI KYVSN+LNN   ++ +LVK++LFVLV+
Subjt:  RA--YADDIVKYVSNKLNNNVGSSNSLVKLLLFVLVL

KAG6579490.1 hypothetical protein SDJN03_23938, partial [Cucurbita argyrosperma subsp. sororia]2.6e-0945.54Show/hide
Query:  MGTSI-FFLLFLLSLFSFHFLSIAASFHVHKNGLTVS---SDDDNDWEFVMNPNTFSSRIWIGNNTTFDEFGQRDKCRTLDCDGGNFLQSRAYVDRGGGS
        MG SI  FL+FLL LFSFH  S AAS     +  T+    SD DN+W FV++P++ SS I +G                   D G  LQ RAYVDRG GS
Subjt:  MGTSI-FFLLFLLSLFSFHFLSIAASFHVHKNGLTVS---SDDDNDWEFVMNPNTFSSRIWIGNNTTFDEFGQRDKCRTLDCDGGNFLQSRAYVDRGGGS

Query:  LFRWRAYADDIV
        L RWRAY D ++
Subjt:  LFRWRAYADDIV

KGN50133.1 hypothetical protein Csa_000073 [Cucumis sativus]2.0e-3362.41Show/hide
Query:  MGTSIFFLLFLLSLFSFHF-LSIAASFHVHKNG-LTVSSDDDND-WEFVMNPNTFSSRIWIGNNTTFDEFGQRDKCRTLDCDGGN-----FLQSRAYVDR
        MGT IFF LF++SLFSFHF LS AASF VH+NG  T S DD+ND W FVMNPNTFSS IWIG    FD      KC T DC  G+     FLQ +A+VD+
Subjt:  MGTSIFFLLFLLSLFSFHF-LSIAASFHVHKNG-LTVSSDDDND-WEFVMNPNTFSSRIWIGNNTTFDEFGQRDKCRTLDCDGGN-----FLQSRAYVDR

Query:  GGGSLFRWRAYADDIVKYVSNKLNNNVGSSNSLVKLLLFVL
        GGGS FRWR YA+DI KYV +KLN+N+ +S SLVKLL+FV+
Subjt:  GGGSLFRWRAYADDIVKYVSNKLNNNVGSSNSLVKLLLFVL

TrEMBL top hitse value%identityAlignment
A0A0A0KKL7 Uncharacterized protein9.5e-3462.41Show/hide
Query:  MGTSIFFLLFLLSLFSFHF-LSIAASFHVHKNG-LTVSSDDDND-WEFVMNPNTFSSRIWIGNNTTFDEFGQRDKCRTLDCDGGN-----FLQSRAYVDR
        MGT IFF LF++SLFSFHF LS AASF VH+NG  T S DD+ND W FVMNPNTFSS IWIG    FD      KC T DC  G+     FLQ +A+VD+
Subjt:  MGTSIFFLLFLLSLFSFHF-LSIAASFHVHKNG-LTVSSDDDND-WEFVMNPNTFSSRIWIGNNTTFDEFGQRDKCRTLDCDGGN-----FLQSRAYVDR

Query:  GGGSLFRWRAYADDIVKYVSNKLNNNVGSSNSLVKLLLFVL
        GGGS FRWR YA+DI KYV +KLN+N+ +S SLVKLL+FV+
Subjt:  GGGSLFRWRAYADDIVKYVSNKLNNNVGSSNSLVKLLLFVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACCTCCATTTTCTTTCTCCTCTTTCTTCTTTCTCTTTTCTCCTTCCATTTCCTCTCCATTGCAGCTTCTTTTCACGTCCACAAAAATGGTCTCACTGTT
TCTTCGGACGACGATAATGACTGGGAATTTGTCATGAACCCCAACACTTTTAGCTCCCGCATTTGGATTGGAAACAACACTACATTTGACGAATTCGGGCAGCGC
GACAAATGTCGAACCCTTGACTGTGACGGTGGCAACTTCCTTCAAAGCCGAGCTTATGTGGACCGGGGCGGTGGCAGCCTTTTCCGGTGGCGAGCTTACGCAGAC
GACATCGTCAAATATGTGTCAAACAAATTGAATAATAATGTTGGGAGTAGCAATAGTTTAGTTAAATTATTGTTATTTGTGCTCGTTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAACCTCCATTTTCTTTCTCCTCTTTCTTCTTTCTCTTTTCTCCTTCCATTTCCTCTCCATTGCAGCTTCTTTTCACGTCCACAAAAATGGTCTCACTGTT
TCTTCGGACGACGATAATGACTGGGAATTTGTCATGAACCCCAACACTTTTAGCTCCCGCATTTGGATTGGAAACAACACTACATTTGACGAATTCGGGCAGCGC
GACAAATGTCGAACCCTTGACTGTGACGGTGGCAACTTCCTTCAAAGCCGAGCTTATGTGGACCGGGGCGGTGGCAGCCTTTTCCGGTGGCGAGCTTACGCAGAC
GACATCGTCAAATATGTGTCAAACAAATTGAATAATAATGTTGGGAGTAGCAATAGTTTAGTTAAATTATTGTTATTTGTGCTCGTTCTTTAA
Protein sequenceShow/hide protein sequence
MGTSIFFLLFLLSLFSFHFLSIAASFHVHKNGLTVSSDDDNDWEFVMNPNTFSSRIWIGNNTTFDEFGQRDKCRTLDCDGGNFLQSRAYVDRGGGSLFRWRAYAD
DIVKYVSNKLNNNVGSSNSLVKLLLFVLVL