; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G003640 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G003640
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionprotein LITTLE ZIPPER 1-like
Genome locationCicolChr01:3628716..3629362
RNA-Seq ExpressionCcUC01G003640
SyntenyCcUC01G003640
Gene Ontology termsNA
InterPro domainsIPR039312 - Protein LITTLE ZIPPER


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647881.1 hypothetical protein Csa_000025 [Cucumis sativus]1.6e-4095.88Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MC+SATQSVLFHTIQSSKNRRSSKRS  QVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLAL+TEFQKKFPHLEQRK
Subjt:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
KAG6579456.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3587.63Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MCI ATQS+LFH IQ+SKN+R SKRSKLQVLRLT RRRCEEKLGKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEFQKKFPHL QRK
Subjt:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
KAG7036101.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-3283.67Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRC-EEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MCI+ATQ +LFH I +SKNRR  KRSKLQV RL+SRRR  EEK GKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEF KKFPH +QRK
Subjt:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRC-EEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
XP_022922429.1 protein LITTLE ZIPPER 1-like [Cucurbita moschata]2.3e-3689.69Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MCISATQS+LFH IQ+SKNRR SKRSKLQVLRLT RRRCEEKLGKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEFQKKFPHL QRK
Subjt:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
XP_023534553.1 protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo]2.7e-3282.47Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MCI+ATQ +LFH I +SKNRR  KRSKLQV RL+ RR  EEK GKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEF KKFPH +QRK
Subjt:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
TrEMBL top hitse value%identityAlignment
A0A0A0KKF8 Uncharacterized protein5.4e-3994.85Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MC+SATQSVLFHTIQSSKNRRSSKRS  QVLRLT RRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLAL+TEFQKKFPHLEQRK
Subjt:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
A0A6J1DZF5 protein LITTLE ZIPPER 2-like isoform X22.4e-3183.33Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRC-EEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQ
        MCISAT+S  FH I +SKNRR  KRSKLQV RLTSRRRC EEK+GKDIELKNLQLYLENQTIIEENEKLRE+ANILHQENLALMTE QKKF HL++
Subjt:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRC-EEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQ
A0A6J1E319 protein LITTLE ZIPPER 2-like isoform X14.6e-3081.05Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQ
        MCISAT+S  FH I +SKNRR  KRSKLQV RLT RR  EEK+GKDIELKNLQLYLENQTIIEENEKLRE+ANILHQENLALMTE QKKF HL++
Subjt:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQ
A0A6J1E3C5 protein LITTLE ZIPPER 1-like1.1e-3689.69Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MCISATQS+LFH IQ+SKNRR SKRSKLQVLRLT RRRCEEKLGKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEFQKKFPHL QRK
Subjt:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
A0A6P9E725 protein LITTLE ZIPPER 1-like isoform X22.1e-2264.52Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHL
        MC +  + +   T++SS+ ++ SKRSK+QV  LT R+ CEEK+ KD+ELKNL+LYLEN++IIEENEKLR KAN+LHQENLALM+EFQKKFP L
Subjt:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHL
SwissProt top hitse value%identityAlignment
F4IG60 Protein LITTLE ZIPPER 19.9e-0640.45Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKK
        MC+S++++  F    +        +S +++ RL+ RRR   +  K +E+ NL+LY+ENQ II ENEKL++KA +LHQEN  L +  Q K
Subjt:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKK
Q9LZX5 Protein LITTLE ZIPPER 28.9e-0745.71Show/hide
Query:  RSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKF
        +S  ++ L++L LT RRR   K  K++E++NL+L++ENQ+II ENE L++KA +LH EN AL      K+
Subjt:  RSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKF
Arabidopsis top hitse value%identityAlignment
AT2G45450.1 protein binding7.0e-0740.45Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKK
        MC+S++++  F    +        +S +++ RL+ RRR   +  K +E+ NL+LY+ENQ II ENEKL++KA +LHQEN  L +  Q K
Subjt:  MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKK
AT3G60890.1 protein binding6.3e-0845.71Show/hide
Query:  RSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKF
        +S  ++ L++L LT RRR   K  K++E++NL+L++ENQ+II ENE L++KA +LH EN AL      K+
Subjt:  RSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKF
AT3G60890.2 protein binding2.6e-0947.14Show/hide
Query:  RSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKF
        +S  ++ L++L LTSRRR   K  K++E++NL+L++ENQ+II ENE L++KA +LH EN AL      K+
Subjt:  RSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCATCAGTGCAACGCAGAGTGTTCTGTTTCATACAATTCAAAGTTCCAAGAACAGGAGAAGTTCAAAAAGATCCAAACTTCAAGTTCTGAGGCTTACCAGC
AGGAGGAGATGTGAAGAGAAGCTGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTATATCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAGCTAAGAGAG
AAAGCCAATATCCTTCATCAAGAGAATTTGGCTTTAATGACTGAGTTTCAGAAAAAATTCCCACATTTGGAACAGAGAAAGTGA
mRNA sequenceShow/hide mRNA sequence
CTTTCATACAATATTCTACTAGAAAGAAAGGCAAAAGTTAAGAAGCTGCCATAGAAGAATAATGTGCATCAGTGCAACGCAGAGTGTTCTGTTTCATACAATTCA
AAGTTCCAAGAACAGGAGAAGTTCAAAAAGATCCAAACTTCAAGTTCTGAGGCTTACCAGCAGGAGGAGATGTGAAGAGAAGCTGGGGAAGGATATTGAGCTGAA
GAATCTGCAGCTATATCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAGCTAAGAGAGAAAGCCAATATCCTTCATCAAGAGAATTTGGCTTTAATGACTGA
GTTTCAGAAAAAATTCCCACATTTGGAACAGAGAAAGTGATGGGAATCATCAGAGGGTGACATCGTTTTATCTCTCTCCCTCTCTCTCTAGGGAGGGTGAGAAGG
TCTGAGTGATTTCTAAATGTATTGAACTCTTTATTCAATATATATGTGCCATTTATCTAGAGTTGACATAACTTGAAGAATAGAGTAATTTATATAGTAGTGAGA
GGTTGGGAGTTGGAAATCTTTTTCAAGG
Protein sequenceShow/hide protein sequence
MCISATQSVLFHTIQSSKNRRSSKRSKLQVLRLTSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK