; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G004130 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G004130
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionTransmembrane protein
Genome locationCicolChr01:4272892..4296262
RNA-Seq ExpressionCcUC01G004130
SyntenyCcUC01G004130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAG7887306.1 unnamed protein product, partial [Brassica rapa]9.4e-1558.06Show/hide
Query:  MFKTLRSKLRWRGMLSLLPKTLALMAVQRQTAASRSARPSTKVQHGVTGGLPIVMSMRPPRSLAQTPILRVSLGHFPYPDEGLGFVGGHGLGL
        +  TLRSKLR  G L L+P+TLAL AVQRQTAASRS +P  ++QHGVTGG+P V S    R+L QTP  +VSLG  P     +G VGG GL L
Subjt:  MFKTLRSKLRWRGMLSLLPKTLALMAVQRQTAASRSARPSTKVQHGVTGGLPIVMSMRPPRSLAQTPILRVSLGHFPYPDEGLGFVGGHGLGL

KAA3475847.1 transmembrane protein [Gossypium australe]2.5e-1558Show/hide
Query:  KTLRSKLRWRGMLSLLPKTLALMAVQRQTAASRSARPSTKVQHGVTGGLPIVMSMRPPRSLAQTPILRVSLGHFPYPD-EGLGFVG-GHGLGLDIKEQTE
        +TLRSKLR  GML L+PK LAL+AVQR  AASRS RP  + QHG+TGG P V   R   +LA TP LR SLGH P  D  G+G +G G GLGL + E+ E
Subjt:  KTLRSKLRWRGMLSLLPKTLALMAVQRQTAASRSARPSTKVQHGVTGGLPIVMSMRPPRSLAQTPILRVSLGHFPYPD-EGLGFVG-GHGLGLDIKEQTE

KAA3475848.1 transmembrane protein [Gossypium australe]3.8e-1658.1Show/hide
Query:  KTLRSKLRWRGMLSLLPKTLALMAVQRQTAASRSARPSTKVQHGVTGGLPIVMSMRPPRSLAQTPILRVSLGHFPYPDE--GLGFVGGHGLGLDIKEQTE
        +TLRSKLR  GML L+PKTLAL+AVQRQTAASRS RPS + QHG+TGG P+   +  P +LA TP LR SLGH P  D   GLGF G     L ++ + E
Subjt:  KTLRSKLRWRGMLSLLPKTLALMAVQRQTAASRSARPSTKVQHGVTGGLPIVMSMRPPRSLAQTPILRVSLGHFPYPDE--GLGFVGGHGLGLDIKEQTE

Query:  VERDV
        V  DV
Subjt:  VERDV

KAF3492506.1 hypothetical protein DY000_02054766, partial [Brassica cretica]8.2e-1962.37Show/hide
Query:  MFKTLRSKLRWRGMLSLLPKTLALMAVQRQTAASRSARPSTKVQHGVTGGLPIVMSMRPPRSLAQTPILRVSLGHFPYPDEGLGFVGGHGLGL
        + +TLR +LR  G   L+P+TLAL AVQRQTAAS SA P  ++QHG+TGGLP V S RP  +LAQTP LRVSLGHFP P+ GLG   G G GL
Subjt:  MFKTLRSKLRWRGMLSLLPKTLALMAVQRQTAASRSARPSTKVQHGVTGGLPIVMSMRPPRSLAQTPILRVSLGHFPYPDEGLGFVGGHGLGL

MBA0768798.1 hypothetical protein [Gossypium trilobum]1.2e-1457.14Show/hide
Query:  KTLRSKLRWRGMLSLLPKTLALMAVQRQTAASRSARPSTKVQHGVTGGLPIVMSMRPPRSLAQTPILRVSLGHFPYPDEGLGFVGGHGLGLDIKEQTE
        +TLRSKLR  GML L+PK LAL+AVQRQ AASRS RP  + QHG+TGG P+V ++    +LA TP LR SLGH P  D G+G   G GLGL+ +E+ +
Subjt:  KTLRSKLRWRGMLSLLPKTLALMAVQRQTAASRSARPSTKVQHGVTGGLPIVMSMRPPRSLAQTPILRVSLGHFPYPDEGLGFVGGHGLGLDIKEQTE

TrEMBL top hitse value%identityAlignment
A0A0A0KP81 Uncharacterized protein5.7e-1862.65Show/hide
Query:  GHGLGLDIKEQTEVERDVKLVAQNASLDGSAKADCSFKISKAFNQGAAWGHWGLADRKVDEAAEKLGTDADFKDIKEQAEVER
        G  L  ++KEQ +VE D  LV QNAS +GSAKAD  FKISK  NQGAAWGHWGLAD +VDEAA+KLG D DFK I     + R
Subjt:  GHGLGLDIKEQTEVERDVKLVAQNASLDGSAKADCSFKISKAFNQGAAWGHWGLADRKVDEAAEKLGTDADFKDIKEQAEVER

A0A5B6W3Q8 Transmembrane protein1.8e-1658.1Show/hide
Query:  KTLRSKLRWRGMLSLLPKTLALMAVQRQTAASRSARPSTKVQHGVTGGLPIVMSMRPPRSLAQTPILRVSLGHFPYPDE--GLGFVGGHGLGLDIKEQTE
        +TLRSKLR  GML L+PKTLAL+AVQRQTAASRS RPS + QHG+TGG P+   +  P +LA TP LR SLGH P  D   GLGF G     L ++ + E
Subjt:  KTLRSKLRWRGMLSLLPKTLALMAVQRQTAASRSARPSTKVQHGVTGGLPIVMSMRPPRSLAQTPILRVSLGHFPYPDE--GLGFVGGHGLGLDIKEQTE

Query:  VERDV
        V  DV
Subjt:  VERDV

A0A5B6W432 Transmembrane protein1.2e-1558Show/hide
Query:  KTLRSKLRWRGMLSLLPKTLALMAVQRQTAASRSARPSTKVQHGVTGGLPIVMSMRPPRSLAQTPILRVSLGHFPYPD-EGLGFVG-GHGLGLDIKEQTE
        +TLRSKLR  GML L+PK LAL+AVQR  AASRS RP  + QHG+TGG P V   R   +LA TP LR SLGH P  D  G+G +G G GLGL + E+ E
Subjt:  KTLRSKLRWRGMLSLLPKTLALMAVQRQTAASRSARPSTKVQHGVTGGLPIVMSMRPPRSLAQTPILRVSLGHFPYPD-EGLGFVG-GHGLGLDIKEQTE

A0A7J8UPC6 Uncharacterized protein (Fragment)1.0e-1443.33Show/hide
Query:  KTLRSKLRWRGMLSLLPKTLALMAVQRQTAASRSARPSTKVQHGVTGGLPIVMSMRPPRSLAQTPILRVSLGHFPYPDEGLGFVGGHGLGLDIKEQTEV-
        +TLRSKLR  GML L+PK LAL+AVQRQ AASRS RP  + QHG+TGG P V ++    +LA TP LR SLGH P  D G+G   G GLGL+ +E+ +  
Subjt:  KTLRSKLRWRGMLSLLPKTLALMAVQRQTAASRSARPSTKVQHGVTGGLPIVMSMRPPRSLAQTPILRVSLGHFPYPDEGLGFVGGHGLGLDIKEQTEV-

Query:  -----ERDVKLVAQNASLDGSAKADCSFKISKAFNQ-------GAAWGHW
             E+   L+ +      S+KA   F   +  +Q          W +W
Subjt:  -----ERDVKLVAQNASLDGSAKADCSFKISKAFNQ-------GAAWGHW

A0A7J9E7L5 Uncharacterized protein5.9e-1557.14Show/hide
Query:  KTLRSKLRWRGMLSLLPKTLALMAVQRQTAASRSARPSTKVQHGVTGGLPIVMSMRPPRSLAQTPILRVSLGHFPYPDEGLGFVGGHGLGLDIKEQTE
        +TLRSKLR  GML L+PK LAL+AVQRQ AASRS RP  + QHG+TGG P+V ++    +LA TP LR SLGH P  D G+G   G GLGL+ +E+ +
Subjt:  KTLRSKLRWRGMLSLLPKTLALMAVQRQTAASRSARPSTKVQHGVTGGLPIVMSMRPPRSLAQTPILRVSLGHFPYPDEGLGFVGGHGLGLDIKEQTE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAAAACATTAAGGAGCAAGCTGAGGTGGAGAGGGATGTTAAGCTTGTTGCCCAAAACGCTAGCCTTGATGGCAGTGCAAAGGCAGACTGCAGCTTCAAGATCAGC
TAGGCCTTCAACCAAGGTGCAGCATGGGGTCACCGGGGGCTTGCCGATCGTAATGTCGATGAGGCCGCCGAGAAGCTTGGCACAAACGCCAATTTTAAGGGTGTCCCTAG
GGCACTTTCCATATCCAGATGAAGGGCTTGGCTTTGTGGGAGGGCATGGCTTGGGCTTGGACATTAAGGAGCAAACTGAGGTGGAGAGGGATGTTAAGCTTGTTGCCCAA
AACGCTAGCCTTGATGGCAGTGCAAAGGCAGACTGCAGCTTCAAGATCAGCAAGGCCTTCAACCAAGGTGCAGCATGGGGTCACTGGGGGCTTGCCGATCGTAAGGTCGA
CGAGGCCGCCGAGAAGCTGGGCACAGACGCCGATTTTAAGGACATTAAGGAGCAAGCTGAGGTGGAGAGGGATGTTAAGCTTGTTTCCCAAAACGCTAGCCTTGATGGCA
GTGCAAAGGCAAACAGCAGCTTCAAGATCTGCAAGGCCTTCAACCAAGGTGCAGCATGGGGTCACCGGGGGCTTGCCGATCGTAAGGTCGACGAGGCCGCCGAGAAGCTT
GGCACAAACGCCGATTTTAAGGACATTAAGGAGCAAGCTGAGGTGGAGAGGGATGTTAAGCTTGCTGCCCAAAACGCTAGCCTTGATGGCAGTGCAAAGGCAAACAGCAG
CTTCAAGATCTGCAAGGCCTTCAACCAAGGTGCAGCATGGGGTCACCGGGGGCTTGCCAATGGTAAGGTCGACAAGGCCGCCAAGAAGCTTGGCGCAGATGCCGATTTTA
AGGGGAAGGAGATATTGAGTAATGAGTTCAACATGAAACTTTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTAAAACATTAAGGAGCAAGCTGAGGTGGAGAGGGATGTTAAGCTTGTTGCCCAAAACGCTAGCCTTGATGGCAGTGCAAAGGCAGACTGCAGCTTCAAGATCAGC
TAGGCCTTCAACCAAGGTGCAGCATGGGGTCACCGGGGGCTTGCCGATCGTAATGTCGATGAGGCCGCCGAGAAGCTTGGCACAAACGCCAATTTTAAGGGTGTCCCTAG
GGCACTTTCCATATCCAGATGAAGGGCTTGGCTTTGTGGGAGGGCATGGCTTGGGCTTGGACATTAAGGAGCAAACTGAGGTGGAGAGGGATGTTAAGCTTGTTGCCCAA
AACGCTAGCCTTGATGGCAGTGCAAAGGCAGACTGCAGCTTCAAGATCAGCAAGGCCTTCAACCAAGGTGCAGCATGGGGTCACTGGGGGCTTGCCGATCGTAAGGTCGA
CGAGGCCGCCGAGAAGCTGGGCACAGACGCCGATTTTAAGGACATTAAGGAGCAAGCTGAGGTGGAGAGGGATGTTAAGCTTGTTTCCCAAAACGCTAGCCTTGATGGCA
GTGCAAAGGCAAACAGCAGCTTCAAGATCTGCAAGGCCTTCAACCAAGGTGCAGCATGGGGTCACCGGGGGCTTGCCGATCGTAAGGTCGACGAGGCCGCCGAGAAGCTT
GGCACAAACGCCGATTTTAAGGACATTAAGGAGCAAGCTGAGGTGGAGAGGGATGTTAAGCTTGCTGCCCAAAACGCTAGCCTTGATGGCAGTGCAAAGGCAAACAGCAG
CTTCAAGATCTGCAAGGCCTTCAACCAAGGTGCAGCATGGGGTCACCGGGGGCTTGCCAATGGTAAGGTCGACAAGGCCGCCAAGAAGCTTGGCGCAGATGCCGATTTTA
AGGGGAAGGAGATATTGAGTAATGAGTTCAACATGAAACTTTCGTAA
Protein sequenceShow/hide protein sequence
MFKTLRSKLRWRGMLSLLPKTLALMAVQRQTAASRSARPSTKVQHGVTGGLPIVMSMRPPRSLAQTPILRVSLGHFPYPDEGLGFVGGHGLGLDIKEQTEVERDVKLVAQ
NASLDGSAKADCSFKISKAFNQGAAWGHWGLADRKVDEAAEKLGTDADFKDIKEQAEVERDVKLVSQNASLDGSAKANSSFKICKAFNQGAAWGHRGLADRKVDEAAEKL
GTNADFKDIKEQAEVERDVKLAAQNASLDGSAKANSSFKICKAFNQGAAWGHRGLANGKVDKAAKKLGADADFKGKEILSNEFNMKLS