; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G005100 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G005100
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionU6 snRNA phosphodiesterase
Genome locationCicolChr01:5031548..5038583
RNA-Seq ExpressionCcUC01G005100
SyntenyCcUC01G005100
Gene Ontology termsGO:0034477 - U6 snRNA 3'-end processing (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:1990838 - poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends (molecular function)
InterPro domainsIPR027521 - U6 snRNA phosphodiesterase Usb1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143673.1 U6 snRNA phosphodiesterase [Cucumis sativus]3.1e-13881.62Show/hide
Query:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT
        MDALRA YGGSSSDEE DTVSP   SASTS PQ LDE V+FLPLPPPPLSLL+FPNSTC                              VLD+L IDQAT
Subjt:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT

Query:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ
        RVRSFPHVQGNYALH+YIPVYVPTNARKEVALF+KK+SSLVPALHLVDID+PLDVLCKDD KLEQA AREFHISLSRTV IRVHQIDSIVTMLRQKLQS 
Subjt:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ

Query:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK
        RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIR+QIQVVNEVYKLHNLPEFYKEARPHIS AWALGD+S+L SQAVHNELKRSAVKE  KRCIF+TK
Subjt:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK

Query:  FNGIECKIGKKLYKICKFPDE
        FNGIECKIGKK+YKICKFPDE
Subjt:  FNGIECKIGKKLYKICKFPDE

XP_008467330.1 PREDICTED: U6 snRNA phosphodiesterase [Cucumis melo]6.3e-13981.93Show/hide
Query:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT
        MDALRA YGGSSSDEE DTVSPS  SASTSTPQ  DE VS LPLPPPPLSLL+FPNSTC                              VLD+L IDQAT
Subjt:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT

Query:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ
        RVRSFPHVQGNYALH+YIPVYVPTNARKEVALF+KK+SSLVPALHLVDID+PLDVLCKDDHKLEQALAREFHISLSRTV IRVHQIDSIVTMLRQKLQS 
Subjt:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ

Query:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK
        RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIR+QIQVVNEVYKLHNLPEFYKEARPHIS AWALGD+S++ SQAVHNELKRSAVKE  KRCIF+TK
Subjt:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK

Query:  FNGIECKIGKKLYKICKFPDE
        FNGIECKIGKK+YKICKF DE
Subjt:  FNGIECKIGKKLYKICKFPDE

XP_022928923.1 U6 snRNA phosphodiesterase [Cucurbita moschata]2.8e-13177.26Show/hide
Query:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT
        M+AL A YGGSSSDE+ DTVSPSS SAS S PQ  DE  SFLPLPPPPLSLL FPNST                              + LD+L I QA 
Subjt:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT

Query:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ
        RVRSFPHVQGNYALHLYIPVY+ TNARKEVALFLKK+S LVPALHLVDID+PLD+LCKDDHKLEQALAREFHISLSRTV IRVHQIDSIVTMLRQKLQSQ
Subjt:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ

Query:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK
        RRYWIDFSKWETFVNDDLSRTFLSMEII GGLMEIR+ IQVVNEVYKLHNLPEFYKE RPHIS AWALGDLSKLLSQ+VH+E+K+S VKE  KR IF+ K
Subjt:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK

Query:  FNGIECKIGKKLYKICKFPDE
        FNGIECKIGKK++KICKFPDE
Subjt:  FNGIECKIGKKLYKICKFPDE

XP_023549871.1 U6 snRNA phosphodiesterase [Cucurbita pepo subsp. pepo]1.3e-13177.09Show/hide
Query:  MDALRALYGGSSSDEEADTVSPSSGSASTST--PQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQ
        M+AL A YGGSSSDE+ DTVSPSS SAS S   PQ  DE  SFLPLPPPPLSLL FPNST                              + LD+L I Q
Subjt:  MDALRALYGGSSSDEEADTVSPSSGSASTST--PQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQ

Query:  ATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQ
        A RVRSFPHVQGNYA+HLYIPVY+PTNARKEVALFLKK+S LVPALHLVDID+PLD+LCKDDHKLEQALAREFHISLSRTV IRVHQIDSIVTMLRQKLQ
Subjt:  ATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQ

Query:  SQRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFS
        SQRRYWIDFSKWETFVNDDLSRTFLSMEII GGLMEIR+ IQVVNEVYKLHNLPEFYKE RPHIS AWALGDLSKLLSQ+VH+E+K+S VKE  KRCIF+
Subjt:  SQRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFS

Query:  TKFNGIECKIGKKLYKICKFPDE
         KFNGIECKIGKK++KICKFPDE
Subjt:  TKFNGIECKIGKKLYKICKFPDE

XP_038875354.1 U6 snRNA phosphodiesterase isoform X1 [Benincasa hispida]2.0e-14081.93Show/hide
Query:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT
        MDALRA YGGSSSDEEADTVSPSS S S STPQ  DE VSFLPLPPP  SLLHFPNST                              ++LD+L IDQAT
Subjt:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT

Query:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ
        RVRSFPHVQGNYALHLYIPVYVPTN RKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFH+SLSRTV IRVHQIDSIVTMLRQKLQSQ
Subjt:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ

Query:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK
        RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIR+QIQ+VNEVYKLHNLPEFYKEARPHIS AWA+GDLSKLLSQAVHNE+K SAV ++LKRCIF+TK
Subjt:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK

Query:  FNGIECKIGKKLYKICKFPDE
        F GIECKIGKK+YKICKFPDE
Subjt:  FNGIECKIGKKLYKICKFPDE

TrEMBL top hitse value%identityAlignment
A0A0A0KPH5 U6 snRNA phosphodiesterase1.5e-13881.62Show/hide
Query:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT
        MDALRA YGGSSSDEE DTVSP   SASTS PQ LDE V+FLPLPPPPLSLL+FPNSTC                              VLD+L IDQAT
Subjt:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT

Query:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ
        RVRSFPHVQGNYALH+YIPVYVPTNARKEVALF+KK+SSLVPALHLVDID+PLDVLCKDD KLEQA AREFHISLSRTV IRVHQIDSIVTMLRQKLQS 
Subjt:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ

Query:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK
        RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIR+QIQVVNEVYKLHNLPEFYKEARPHIS AWALGD+S+L SQAVHNELKRSAVKE  KRCIF+TK
Subjt:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK

Query:  FNGIECKIGKKLYKICKFPDE
        FNGIECKIGKK+YKICKFPDE
Subjt:  FNGIECKIGKKLYKICKFPDE

A0A1S3CTB0 U6 snRNA phosphodiesterase3.0e-13981.93Show/hide
Query:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT
        MDALRA YGGSSSDEE DTVSPS  SASTSTPQ  DE VS LPLPPPPLSLL+FPNSTC                              VLD+L IDQAT
Subjt:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT

Query:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ
        RVRSFPHVQGNYALH+YIPVYVPTNARKEVALF+KK+SSLVPALHLVDID+PLDVLCKDDHKLEQALAREFHISLSRTV IRVHQIDSIVTMLRQKLQS 
Subjt:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ

Query:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK
        RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIR+QIQVVNEVYKLHNLPEFYKEARPHIS AWALGD+S++ SQAVHNELKRSAVKE  KRCIF+TK
Subjt:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK

Query:  FNGIECKIGKKLYKICKFPDE
        FNGIECKIGKK+YKICKF DE
Subjt:  FNGIECKIGKKLYKICKFPDE

A0A6J1DNL4 U6 snRNA phosphodiesterase1.1e-11269.47Show/hide
Query:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT
        MDAL+A Y GSSSDEE D VS +    S   P P         LPPPPLSLL FPNS                              ++ L +L I Q T
Subjt:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT

Query:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ
        R RSFPHV+GNYALH+YIPVY+PT ++KEV LFLKKVSSLVP+LHLVDIDVPL  LCKD+HKLEQALAREFHISLSRTV IRVHQIDSIV+MLRQKLQ Q
Subjt:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ

Query:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK
        RRYWIDFSKWETFVNDDLSRTFLSMEII GGLMEIR+QIQVVNEVYK HNLPEFYKE RPHIS AWALGDLSKLLS+ V +++KRS++  S KRCIF+TK
Subjt:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK

Query:  FNGIECKIGKKLYKICKFPDE
        F+GIECKIGKK YKICK PDE
Subjt:  FNGIECKIGKKLYKICKFPDE

A0A6J1EQH7 U6 snRNA phosphodiesterase1.4e-13177.26Show/hide
Query:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT
        M+AL A YGGSSSDE+ DTVSPSS SAS S PQ  DE  SFLPLPPPPLSLL FPNST                              + LD+L I QA 
Subjt:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT

Query:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ
        RVRSFPHVQGNYALHLYIPVY+ TNARKEVALFLKK+S LVPALHLVDID+PLD+LCKDDHKLEQALAREFHISLSRTV IRVHQIDSIVTMLRQKLQSQ
Subjt:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ

Query:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK
        RRYWIDFSKWETFVNDDLSRTFLSMEII GGLMEIR+ IQVVNEVYKLHNLPEFYKE RPHIS AWALGDLSKLLSQ+VH+E+K+S VKE  KR IF+ K
Subjt:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK

Query:  FNGIECKIGKKLYKICKFPDE
        FNGIECKIGKK++KICKFPDE
Subjt:  FNGIECKIGKKLYKICKFPDE

A0A6J1HYN3 U6 snRNA phosphodiesterase3.1e-13176.45Show/hide
Query:  MDALRALYGGSSSDEEADTVSPSSGSASTST------PQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDEL
        M+AL A YGGSSSDE+ADTVSPSS SAS S       PQ  DE  SFLPLPPPPLSLL FPNST                              + LD+L
Subjt:  MDALRALYGGSSSDEEADTVSPSSGSASTST------PQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDEL

Query:  SIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLR
         I QA RVRSFPHVQGNYA+HLYIPVY+PTNARKEVALFLKK+S LVPALHLVDID+PLD+LCKDD KLEQALAREFHISLSRTV IRVHQIDSIVTMLR
Subjt:  SIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLR

Query:  QKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKR
        QKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII GGLMEIR++IQVVNEVYKLHNLPEFYKEARPHIS AWALGDLSKLLSQ+VH+E+K+S VKE  KR
Subjt:  QKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKR

Query:  CIFSTKFNGIECKIGKKLYKICKFPDE
        CIF+ KFNGIECKIGKK++KICKFPDE
Subjt:  CIFSTKFNGIECKIGKKLYKICKFPDE

SwissProt top hitse value%identityAlignment
Q5I0I5 U6 snRNA phosphodiesterase2.2e-1725.12Show/hide
Query:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ
        R+R+FPH +GN+A H+YIP       +  + + L +     P L  ++                     EFH+SLS++V +R H I   V +L+ ++ S 
Subjt:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ

Query:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK
        +R++   ++ + + N + +RTF+ +E ++ G  +    +  V+ V K  +L  FY++   H+S AW +GD    L      EL+    +      +    
Subjt:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK

Query:  FNGIECKIGKKLYKI
           + CK G K + +
Subjt:  FNGIECKIGKKLYKI

Q6DEF6 U6 snRNA phosphodiesterase1.2e-1832.13Show/hide
Query:  SIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLR
        S +   R+RSF H +GN+A +++ P Y P  A  EV   L K+ +   A      D+PL V            + EFH+SLS+TV +R H I   V  +R
Subjt:  SIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLR

Query:  QKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIITG--GLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESL
          L   ++++    K + + N + +RTFL ME+ TG   L+E+ +   +V+E  K  NL  FY++   HIS AW +GD ++ L +A   EL+        
Subjt:  QKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIITG--GLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESL

Query:  KRCIFSTKFNGIECKIGKKLY
                 N + CK G K++
Subjt:  KRCIFSTKFNGIECKIGKKLY

Q7ZYI9 U6 snRNA phosphodiesterase3.5e-1530Show/hide
Query:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ
        R+RSF H +GN+A ++YIP                      P    +D+   L  +  ++  L   ++ EFHIS S+TV +R H I+  V  L+ KL   
Subjt:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ

Query:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEV---YKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIF
         R+     + + + N + +RTFL +E+  G    +   ++VV+EV    +  NL  FY+E   H+S AW +GD  + L  +   EL++  V +  +    
Subjt:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEV---YKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIF

Query:  STKFNG--IECKIGKKLYKI
         T+FN   I CK G K + I
Subjt:  STKFNG--IECKIGKKLYKI

Q91W78 U6 snRNA phosphodiesterase1.8e-1927.44Show/hide
Query:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ
        R+R+FPH +GN+A H+YIP     + R  +   L +    VP L L++                     EFH+SLS++V +R H I   V +L+ ++ S 
Subjt:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ

Query:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK
        +R++   ++ + + N + +RTF+ +E ++ G  +    +  V+   K  +L  FY++   HIS AW +GD S  L      EL+    +      +    
Subjt:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK

Query:  FNGIECKIGKKLYKI
         N + CK G K + +
Subjt:  FNGIECKIGKKLYKI

Q9BQ65 U6 snRNA phosphodiesterase9.2e-1629.3Show/hide
Query:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ
        RVR+FPH +GN+A H    VYVP  A++E   FL  +  L+P        VP  V  K            FH+SLS++V +R H I   V  L+ ++ S 
Subjt:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ

Query:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK
         R++   ++ + + N + +RTF+ +E +T G  +    +  V+ V +  NL  FY++   H+S AW +GD    L      EL+           +    
Subjt:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK

Query:  FNGIECKIGKKLYKI
           + CK G K + +
Subjt:  FNGIECKIGKKLYKI

Arabidopsis top hitse value%identityAlignment
AT5G51170.1 unknown protein3.5e-8753.58Show/hide
Query:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT
        M+ALRA YG SSSD + D +SP+S   + S  +        + LPPPPL+LL    ST S                              LD  S +   
Subjt:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT

Query:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ
        RVR+FPHV GNYALH+Y+PV +P   +KE+  FLKKV+S+VP LHLV+ DVPL +LCKDD K E+AL REFHISL R V +RVHQI+S+++MLRQKLQ Q
Subjt:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ

Query:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK
        +RY IDF+KWE FVNDD +R+FLS+EI T GL EI +QI  VNEVYKLHNLPEFYK+ RPHIS  WALGD+   L  AV  EL++      ++  IF++K
Subjt:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTK

Query:  FNGIECKIGKKLYKICKFPDE
        F GIECKIG K +KICK PDE
Subjt:  FNGIECKIGKKLYKICKFPDE

AT5G51170.2 unknown protein4.2e-5649.59Show/hide
Query:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT
        M+ALRA YG SSSD + D +SP+S   + S  +        + LPPPPL+LL    ST S                              LD  S +   
Subjt:  MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQAT

Query:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ
        RVR+FPHV GNYALH+Y+PV +P   +KE+  FLKKV+S+VP LHLV+ DVPL +LCKDD K E+AL REFHISL R V +RVHQI+S+++MLRQKLQ Q
Subjt:  RVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQ

Query:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVV
        +RY IDF+KWE FVNDD +R+FLS+EI T GL E+  ++ ++
Subjt:  RRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRRQIQVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTCTGAGGGCTTTGTATGGAGGAAGCTCATCAGATGAAGAAGCGGATACAGTCTCCCCTTCATCAGGATCAGCGTCAACATCAACACCACAACCCCTCGATGA
GATTGTGAGCTTTTTACCTCTGCCTCCACCACCACTCTCACTTCTCCATTTTCCAAATTCCACCTGTAGTGCCCTTTTTCCTCCTTACATTTGCATTCTTTATTTTTTTC
ACTTTGTAACGTTGCTCATCAACTCTTTCACTATTTCTTGTTTAGCTGTTTTGGATGAGTTGTCAATTGATCAAGCGACTAGGGTTCGAAGCTTTCCTCATGTTCAAGGA
AACTATGCCCTACACCTTTACATCCCAGTGTATGTACCAACTAATGCAAGGAAGGAGGTGGCCTTGTTTTTGAAGAAAGTTTCCTCACTTGTGCCTGCTCTCCATCTTGT
TGATATTGACGTTCCTTTGGACGTTTTATGTAAAGATGACCACAAACTTGAGCAAGCATTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACAGTGGCAATCCGAGTAC
ACCAGATTGACTCAATAGTGACAATGCTTCGCCAGAAGCTTCAGTCTCAAAGGCGTTATTGGATTGATTTTAGTAAGTGGGAGACTTTTGTTAACGATGATCTCTCTCGG
ACCTTTTTGTCAATGGAAATTATTACTGGAGGGCTAATGGAGATCAGAAGACAAATCCAAGTTGTTAATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGA
AGCAAGACCACATATATCTTTTGCCTGGGCATTAGGTGACCTTAGTAAATTATTGAGTCAAGCAGTTCATAATGAATTGAAAAGGTCCGCAGTTAAGGAATCATTGAAGA
GGTGTATTTTCAGCACCAAATTCAACGGCATCGAATGTAAGATTGGTAAAAAATTGTATAAAATATGTAAATTTCCTGATGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCTCTGAGGGCTTTGTATGGAGGAAGCTCATCAGATGAAGAAGCGGATACAGTCTCCCCTTCATCAGGATCAGCGTCAACATCAACACCACAACCCCTCGATGA
GATTGTGAGCTTTTTACCTCTGCCTCCACCACCACTCTCACTTCTCCATTTTCCAAATTCCACCTGTAGTGCCCTTTTTCCTCCTTACATTTGCATTCTTTATTTTTTTC
ACTTTGTAACGTTGCTCATCAACTCTTTCACTATTTCTTGTTTAGCTGTTTTGGATGAGTTGTCAATTGATCAAGCGACTAGGGTTCGAAGCTTTCCTCATGTTCAAGGA
AACTATGCCCTACACCTTTACATCCCAGTGTATGTACCAACTAATGCAAGGAAGGAGGTGGCCTTGTTTTTGAAGAAAGTTTCCTCACTTGTGCCTGCTCTCCATCTTGT
TGATATTGACGTTCCTTTGGACGTTTTATGTAAAGATGACCACAAACTTGAGCAAGCATTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACAGTGGCAATCCGAGTAC
ACCAGATTGACTCAATAGTGACAATGCTTCGCCAGAAGCTTCAGTCTCAAAGGCGTTATTGGATTGATTTTAGTAAGTGGGAGACTTTTGTTAACGATGATCTCTCTCGG
ACCTTTTTGTCAATGGAAATTATTACTGGAGGGCTAATGGAGATCAGAAGACAAATCCAAGTTGTTAATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGA
AGCAAGACCACATATATCTTTTGCCTGGGCATTAGGTGACCTTAGTAAATTATTGAGTCAAGCAGTTCATAATGAATTGAAAAGGTCCGCAGTTAAGGAATCATTGAAGA
GGTGTATTTTCAGCACCAAATTCAACGGCATCGAATGTAAGATTGGTAAAAAATTGTATAAAATATGTAAATTTCCTGATGAATAAAAAGATCATCGTGAAACGTGTCCT
ATTGTTTTCATATGTGCCCACGAAATTCTTTTTATTTATTTCAGCTTTACTAACAAAATCACTTTTAGTTTTATAGATATTGCACTTTTTATTATCGTTAATTTAAGGTT
CTTGATTTGTGAGGC
Protein sequenceShow/hide protein sequence
MDALRALYGGSSSDEEADTVSPSSGSASTSTPQPLDEIVSFLPLPPPPLSLLHFPNSTCSALFPPYICILYFFHFVTLLINSFTISCLAVLDELSIDQATRVRSFPHVQG
NYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHISLSRTVAIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSR
TFLSMEIITGGLMEIRRQIQVVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNELKRSAVKESLKRCIFSTKFNGIECKIGKKLYKICKFPDE