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CcUC01G005230 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G005230
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionlate embryogenesis abundant protein At5g17165-like
Genome locationCicolChr01:5149158..5153239
RNA-Seq ExpressionCcUC01G005230
SyntenyCcUC01G005230
Gene Ontology termsNA
InterPro domainsIPR039291 - Late embryogenesis abundant protein At5g17165-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055104.1 uncharacterized protein E6C27_scaffold231G00300 [Cucumis melo var. makuwa]1.5e-3059.29Show/hide
Query:  MAASWKII-------AAPRFLLSSSPSP-TFRLRSTDNYNQPRCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHH
        MA S KII       AAPR  L  S SP  F   ++           GFR SHWS YEKN E+ IWPT+V + VI  NLS+NY VPHP+TGVFGPP AHH
Subjt:  MAASWKII-------AAPRFLLSSSPSP-TFRLRSTDNYNQPRCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHH

Query:  NSAAL-NDTSASGKE-DSVLDLKAWFRHNALEDLEKPHSL
        +S+ L NDTSA G E  SVL+LKAWFRHN LEDLEKPHSL
Subjt:  NSAAL-NDTSASGKE-DSVLDLKAWFRHNALEDLEKPHSL

KAE8647930.1 hypothetical protein Csa_000491 [Cucumis sativus]4.2e-3359.12Show/hide
Query:  MAASWKIIAAPRFLLSSSPSPTFRLRSTDNYNQP------RCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNS
        MA S KII A     +++ SP   L     Y  P      RC F  FR+SHWS YEKN E+QIWPT+V +H+I  +LSE+Y VPHP+TGVFGPP AHHNS
Subjt:  MAASWKIIAAPRFLLSSSPSPTFRLRSTDNYNQP------RCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNS

Query:  AAL-NDTSASGKEDSVLDLKAWFRHNALEDLEKPHSL
        + + NDTSA G E SVL+LKAWFRHN LEDLEKPH+L
Subjt:  AAL-NDTSASGKEDSVLDLKAWFRHNALEDLEKPHSL

XP_004143665.1 late embryogenesis abundant protein At5g17165 [Cucumis sativus]1.9e-3361.07Show/hide
Query:  MAASWKIIAAPRFLLSSSPSPTFRLRSTDNYNQPRCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAAL-ND
        MA S KII A     +++ SP   L     Y  P   F GFR+SHWS YEKN E+QIWPT+V +H+I  +LSE+Y VPHP+TGVFGPP AHHNS+ + ND
Subjt:  MAASWKIIAAPRFLLSSSPSPTFRLRSTDNYNQPRCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAAL-ND

Query:  TSASGKEDSVLDLKAWFRHNALEDLEKPHSL
        TSA G E SVL+LKAWFRHN LEDLEKPH+L
Subjt:  TSASGKEDSVLDLKAWFRHNALEDLEKPHSL

XP_016903720.1 PREDICTED: uncharacterized protein LOC103504694 [Cucumis melo]6.1e-3262.9Show/hide
Query:  AAPRFLLSSSPSP-TFRLRSTDNYNQPRCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAAL-NDTSASGKE
        AAPR  L  S SP  F   ++           GFR SHWS YEKN E+ IWPT+V + VI  NLS+NY VPHP+TGVFGPP AHHNS+ L NDTSA G E
Subjt:  AAPRFLLSSSPSP-TFRLRSTDNYNQPRCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAAL-NDTSASGKE

Query:  DSVLDLKAWFRHNALEDLEKPHSL
         SVL+LKAWFRHN LEDLEKPHSL
Subjt:  DSVLDLKAWFRHNALEDLEKPHSL

XP_038875585.1 late embryogenesis abundant protein At5g17165-like [Benincasa hispida]5.7e-3866.67Show/hide
Query:  MAASWK-IIAAPRFLLSSSPSPTFRLRSTDNYNQPRCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAAL-N
        MA+SW+ IIA+PRFLLSS PS       + ++  P   F+  R SHWS YEKN EEQIWPTVV DHVI  N+SENY  PHP+TGVFGPPIAH +++A+ N
Subjt:  MAASWK-IIAAPRFLLSSSPSPTFRLRSTDNYNQPRCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAAL-N

Query:  DTSASGKEDSVLDLKAWFRHNALEDLEKP
        DTSA GKEDSVLD+KAWFRHN LEDLEKP
Subjt:  DTSASGKEDSVLDLKAWFRHNALEDLEKP

TrEMBL top hitse value%identityAlignment
A0A0A0KRJ5 Uncharacterized protein9.1e-3461.07Show/hide
Query:  MAASWKIIAAPRFLLSSSPSPTFRLRSTDNYNQPRCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAAL-ND
        MA S KII A     +++ SP   L     Y  P   F GFR+SHWS YEKN E+QIWPT+V +H+I  +LSE+Y VPHP+TGVFGPP AHHNS+ + ND
Subjt:  MAASWKIIAAPRFLLSSSPSPTFRLRSTDNYNQPRCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAAL-ND

Query:  TSASGKEDSVLDLKAWFRHNALEDLEKPHSL
        TSA G E SVL+LKAWFRHN LEDLEKPH+L
Subjt:  TSASGKEDSVLDLKAWFRHNALEDLEKPHSL

A0A1S4E6U6 uncharacterized protein LOC1035046942.9e-3262.9Show/hide
Query:  AAPRFLLSSSPSP-TFRLRSTDNYNQPRCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAAL-NDTSASGKE
        AAPR  L  S SP  F   ++           GFR SHWS YEKN E+ IWPT+V + VI  NLS+NY VPHP+TGVFGPP AHHNS+ L NDTSA G E
Subjt:  AAPRFLLSSSPSP-TFRLRSTDNYNQPRCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAAL-NDTSASGKE

Query:  DSVLDLKAWFRHNALEDLEKPHSL
         SVL+LKAWFRHN LEDLEKPHSL
Subjt:  DSVLDLKAWFRHNALEDLEKPHSL

A0A5A7UIY1 Uncharacterized protein7.2e-3159.29Show/hide
Query:  MAASWKII-------AAPRFLLSSSPSP-TFRLRSTDNYNQPRCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHH
        MA S KII       AAPR  L  S SP  F   ++           GFR SHWS YEKN E+ IWPT+V + VI  NLS+NY VPHP+TGVFGPP AHH
Subjt:  MAASWKII-------AAPRFLLSSSPSP-TFRLRSTDNYNQPRCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHH

Query:  NSAAL-NDTSASGKE-DSVLDLKAWFRHNALEDLEKPHSL
        +S+ L NDTSA G E  SVL+LKAWFRHN LEDLEKPHSL
Subjt:  NSAAL-NDTSASGKE-DSVLDLKAWFRHNALEDLEKPHSL

A0A6J1H0D3 late embryogenesis abundant protein At5g17165-like9.8e-2052.03Show/hide
Query:  MAASWKIIAAPRFLLSSSPSPTFRLRSTDNYNQPRCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAALNDT
        MAA+  +I A R  L+   +P  RL  +        LF   R  HWS YEKN EE++ PTVV DH+I  +LSE+Y  PHP+TGVFGPPI  HN    +DT
Subjt:  MAASWKIIAAPRFLLSSSPSPTFRLRSTDNYNQPRCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAALNDT

Query:  SASG-KEDSVLDLKAWFRHNALE
        SA G KE SVL+LK WFRH  LE
Subjt:  SASG-KEDSVLDLKAWFRHNALE

A0A6J1K564 late embryogenesis abundant protein At5g17165-like1.9e-2352.67Show/hide
Query:  MAASWKIIAAPRFLLSSSPSPTFRLRSTDNYNQPRCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAALNDT
        MAA+  +I A R  L+   +P  RL  +        LF   R  HWS YEKN EE++ PTVV DH+I  ++SE+Y  PHP+TGVFGPPI+ HN    +DT
Subjt:  MAASWKIIAAPRFLLSSSPSPTFRLRSTDNYNQPRCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAALNDT

Query:  SASG-KEDSVLDLKAWFRHNALEDLEKPHSL
        SA G KE SVL+LK WFRH  LED EKPH L
Subjt:  SASG-KEDSVLDLKAWFRHNALEDLEKPHSL

SwissProt top hitse value%identityAlignment
F4KFM8 Late embryogenesis abundant protein At5g171656.3e-1648.28Show/hide
Query:  RTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAALNDTSASGKEDSVLDLKAWFRHNALEDLEKPH
        R  H S Y+KN+EE++ P+ V D +I P+ S+ Y  PHP+TGVFGP  +  N+    D    G+EDSV++ KAWFR  +LEDL+K H
Subjt:  RTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAALNDTSASGKEDSVLDLKAWFRHNALEDLEKPH

Arabidopsis top hitse value%identityAlignment
AT3G03150.1 unknown protein7.2e-1542.39Show/hide
Query:  LFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAALNDTSASGKEDSVLDLKAWFRHNALEDLEKPH
        LF   R+ H S Y+KN+E+++  + V D VI P+ S+ Y  PHPKTGVFGP    H++ A      + ++ +VL+  AWFR  +LED +K H
Subjt:  LFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAALNDTSASGKEDSVLDLKAWFRHNALEDLEKPH

AT5G17165.1 unknown protein4.5e-1748.28Show/hide
Query:  RTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAALNDTSASGKEDSVLDLKAWFRHNALEDLEKPH
        R  H S Y+KN+EE++ P+ V D +I P+ S+ Y  PHP+TGVFGP  +  N+    D    G+EDSV++ KAWFR  +LEDL+K H
Subjt:  RTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAALNDTSASGKEDSVLDLKAWFRHNALEDLEKPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCAGCTGGAAGATTATTGCTGCTCCACGATTCTTACTTTCATCGTCTCCCTCTCCTACTTTCCGCCTCCGGTCAACCGATAACTACAACCAACCTCGT
TGTTTGTTTGTTGGTTTTAGGACAAGTCATTGGTCAACATATGAGAAGAACCTAGAGGAGCAAATATGGCCCACAGTGGTATCGGACCATGTGATCGATCCTAAT
CTATCTGAAAACTATTGTGTCCCACATCCTAAAACGGGAGTTTTTGGGCCACCAATAGCCCACCACAATTCTGCAGCTCTGAACGATACGTCGGCTAGTGGTAAG
GAGGATTCAGTTCTAGACCTCAAGGCTTGGTTCCGACATAACGCCCTCGAAGATCTTGAGAAACCACACTCTCTCTAA
mRNA sequenceShow/hide mRNA sequence
AATAGTTCCATTAATATTGAGTTATTTGCATGGCCGCCAGCTGGAAGATTATTGCTGCTCCACGATTCTTACTTTCATCGTCTCCCTCTCCTACTTTCCGCCTCC
GGTCAACCGATAACTACAACCAACCTCGTTGTTTGTTTGTTGGTTTTAGGACAAGTCATTGGTCAACATATGAGAAGAACCTAGAGGAGCAAATATGGCCCACAG
TGGTATCGGACCATGTGATCGATCCTAATCTATCTGAAAACTATTGTGTCCCACATCCTAAAACGGGAGTTTTTGGGCCACCAATAGCCCACCACAATTCTGCAG
CTCTGAACGATACGTCGGCTAGTGGTAAGGAGGATTCAGTTCTAGACCTCAAGGCTTGGTTCCGACATAACGCCCTCGAAGATCTTGAGAAACCACACTCTCTCT
AA
Protein sequenceShow/hide protein sequence
MAASWKIIAAPRFLLSSSPSPTFRLRSTDNYNQPRCLFVGFRTSHWSTYEKNLEEQIWPTVVSDHVIDPNLSENYCVPHPKTGVFGPPIAHHNSAALNDTSASGK
EDSVLDLKAWFRHNALEDLEKPHSL