; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G005280 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G005280
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr01:5212886..5213193
RNA-Seq ExpressionCcUC01G005280
SyntenyCcUC01G005280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605659.1 hypothetical protein SDJN03_02976, partial [Cucurbita argyrosperma subsp. sororia]5.5e-1366.67Show/hide
Query:  MVSNKKHLTILAIVLYLMLFLISTYGAARILNPNGNTKALKIKVIVVGRIVRRDLAHGGNYGPGIQ
        M SNKKHL  L IVLYLMLFL S+YGAAR+  PNG+  A ++K I +GRI+RRDLA+GGNY PG Q
Subjt:  MVSNKKHLTILAIVLYLMLFLISTYGAARILNPNGNTKALKIKVIVVGRIVRRDLAHGGNYGPGIQ

KAG7035570.1 hypothetical protein SDJN02_02367, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-1366.67Show/hide
Query:  MVSNKKHLTILAIVLYLMLFLISTYGAARILNPNGNTKALKIKVIVVGRIVRRDLAHGGNYGPGIQ
        M SNKKHL  L IVLYLMLFL S+YGAAR+  PNG+  A ++K I +GRI+RRDLA+GGNY PG Q
Subjt:  MVSNKKHLTILAIVLYLMLFLISTYGAARILNPNGNTKALKIKVIVVGRIVRRDLAHGGNYGPGIQ

KGN50358.1 hypothetical protein Csa_000417 [Cucumis sativus]6.9e-1677.61Show/hide
Query:  MVSNKKHLTILAIVLYLMLFLISTYGAARILNPNGNTKALKIKVIVVG-RIVRRDLAHGGNYGPGIQ
        M S KKHL ILA +LYLMLFL STYGAARIL+ NG+ K  +IKVIVVG RIVRRDLAHGGNYGPG+Q
Subjt:  MVSNKKHLTILAIVLYLMLFLISTYGAARILNPNGNTKALKIKVIVVG-RIVRRDLAHGGNYGPGIQ

TrEMBL top hitse value%identityAlignment
A0A0A0KL54 Uncharacterized protein3.3e-1677.61Show/hide
Query:  MVSNKKHLTILAIVLYLMLFLISTYGAARILNPNGNTKALKIKVIVVG-RIVRRDLAHGGNYGPGIQ
        M S KKHL ILA +LYLMLFL STYGAARIL+ NG+ K  +IKVIVVG RIVRRDLAHGGNYGPG+Q
Subjt:  MVSNKKHLTILAIVLYLMLFLISTYGAARILNPNGNTKALKIKVIVVG-RIVRRDLAHGGNYGPGIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCCAATAAGAAGCACTTGACAATTTTAGCAATTGTCTTGTATCTTATGCTTTTCCTAATTTCAACCTATGGAGCAGCAAGGATCTTGAATCCAAATGGAAATAC
GAAGGCCCTAAAGATCAAGGTTATTGTAGTAGGACGAATTGTACGACGAGATTTGGCACATGGAGGAAATTATGGTCCGGGAATTCAGTGA
mRNA sequenceShow/hide mRNA sequence
CACAAAATGGTTTCCAATAAGAAGCACTTGACAATTTTAGCAATTGTCTTGTATCTTATGCTTTTCCTAATTTCAACCTATGGAGCAGCAAGGATCTTGAATCCAAATGG
AAATACGAAGGCCCTAAAGATCAAGGTTATTGTAGTAGGACGAATTGTACGACGAGATTTGGCACATGGAGGAAATTATGGTCCGGGAATTCAGTGAGATGATATTATGA
AC
Protein sequenceShow/hide protein sequence
MVSNKKHLTILAIVLYLMLFLISTYGAARILNPNGNTKALKIKVIVVGRIVRRDLAHGGNYGPGIQ