; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G006010 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G006010
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionTranscription factor CYCLOIDEA
Genome locationCicolChr01:6082712..6083665
RNA-Seq ExpressionCcUC01G006010
SyntenyCcUC01G006010
Gene Ontology termsGO:2000032 - regulation of secondary shoot formation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR005333 - Transcription factor, TCP
IPR017887 - Transcription factor TCP subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017140.1 Transcription factor TCP12, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-5754.19Show/hide
Query:  LDHLNPSTSSSMYQLEQYEDQFINSYDDLHFPHPFLDDDDLFLSHFLSQQQQQQQL-----------FEQEEKKDEVDE--------------TTRKMKT
        LDH+NPS+       +Q+E+   +SY  LHFPHPFL DDDLFL+HFLSQQQ+QQQ             +QE+++D+ D+               + ++K 
Subjt:  LDHLNPSTSSSMYQLEQYEDQFINSYDDLHFPHPFLDDDDLFLSHFLSQQQQQQQL-----------FEQEEKKDEVDE--------------TTRKMKT

Query:  KKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVY
        KKKKK S  NSNRKNG S TKR GKKDRHSKI TAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS+TIEWLL +SNSAIK LK    +NNSGVSHGS  
Subjt:  KKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVY

Query:  SGQSSEVVSEINNQDQEQEEAGGFTGSFKDKKGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLDHHLSGNNNNNNNNDTYLDYPTFSCPNSIFL
        SG SSEVVS        +++AGG  G+ K KKGRQL+T+GRE+R RARARAR+RT+LK +   QP     H+L       N+++T+L+     CP     
Subjt:  SGQSSEVVSEINNQDQEQEEAGGFTGSFKDKKGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLDHHLSGNNNNNNNNDTYLDYPTFSCPNSIFL

Query:  PSPLSLPYSF
           LS  ++F
Subjt:  PSPLSLPYSF

KGN51554.1 hypothetical protein Csa_008919 [Cucumis sativus]1.6e-8669.35Show/hide
Query:  QLEQYEDQ-FINSYDD---LHFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKKDEVDETTRKMKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYT
        Q +  EDQ  INSYDD    +FPHPFLDDDDLFLSHFLS   QQQQ FEQ ++  ++DETT+KM  KKKKK+ G +S+RKNG + TKRRGKKDRHSKIYT
Subjt:  QLEQYEDQ-FINSYDD---LHFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKKDEVDETTRKMKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYT

Query:  AQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINN-------------QDQEQEEA
        AQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS+TIEWLLLNSNSAIKDLKQ YF   S        SGQSSEVVSEIN+             Q+Q+QE+ 
Subjt:  AQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINN-------------QDQEQEEA

Query:  GGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSGNNN----NNNNNDTYLD-YPTFSCPN-SIFLPSPLSLPYS
          FTG FKDK K R LRTV REARDRARARARQRTLLKNT    PPI         HLSGNNN    +NNNN+TYLD YPTFSCP+ SIFLPSPL LPYS
Subjt:  GGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSGNNN----NNNNNDTYLD-YPTFSCPN-SIFLPSPLSLPYS

Query:  FSDSTLLKLP
        F+DSTLLKLP
Subjt:  FSDSTLLKLP

TYK00281.1 transcription factor CYCLOIDEA [Cucumis melo var. makuwa]5.7e-8467.19Show/hide
Query:  YQLEQYEDQ--FINSYD--DLH-FPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKKDEVDETTRKMKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKI
        +Q +Q+ +    INSYD  DLH FPHPFLDDDDLFLSHFLS   QQQQ FEQ ++  ++DETT+KM  KKKKK+ G +S+R NG + TKRRGKKDRHSKI
Subjt:  YQLEQYEDQ--FINSYD--DLH-FPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKKDEVDETTRKMKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKI

Query:  YTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEIN--------------NQDQEQ
        YTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS+TIEWLLLNSNSAIKDLKQ YF   S        SGQSSEVVSEIN              +Q Q+Q
Subjt:  YTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEIN--------------NQDQEQ

Query:  EEAGGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSGN--------NNNNNNNDTYLD-YPTFSCP-NSIFLPS
        E+   FTG FKDK K R LRT  REARDRARARARQRTLLKNT    PPI         HLSGN        NNNNNNN+TYLD YPTFSCP +S+FLPS
Subjt:  EEAGGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSGN--------NNNNNNNDTYLD-YPTFSCP-NSIFLPS

Query:  PLSLPYSFSDSTLLKLP
        PL LPYSFSDST+LKLP
Subjt:  PLSLPYSFSDSTLLKLP

XP_011656248.2 transcription factor TCP12 [Cucumis sativus]5.3e-9868.68Show/hide
Query:  MMMMKQQDIFCCNNNITEINQIVLDHLNPSTSS--SMYQLEQYEDQ-FINSYDD---LHFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKKDEVDETTR
        MMMMK QD+F CN NITEIN I+L+ LNPS SS     Q +  EDQ  INSYDD    +FPHPFLDDDDLFLSHFLS   QQQQ FEQ ++  ++DETT+
Subjt:  MMMMKQQDIFCCNNNITEINQIVLDHLNPSTSS--SMYQLEQYEDQ-FINSYDD---LHFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKKDEVDETTR

Query:  KMKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSH
        KM  KKKKK+ G +S+RKNG + TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS+TIEWLLLNSNSAIKDLKQ YF   S    
Subjt:  KMKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSH

Query:  GSVYSGQSSEVVSEINN-------------QDQEQEEAGGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSGNN
            SGQSSEVVSEIN+             Q+Q+QE+   FTG FKDK K R LRTV REARDRARARARQRTLLKNT    PPI         HLSGNN
Subjt:  GSVYSGQSSEVVSEINN-------------QDQEQEEAGGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSGNN

Query:  N----NNNNNDTYLD-YPTFSCPN-SIFLPSPLSLPYSFSDSTLLKLP
        N    +NNNN+TYLD YPTFSCP+ SIFLPSPL LPYSF+DSTLLKLP
Subjt:  N----NNNNNDTYLD-YPTFSCPN-SIFLPSPLSLPYSFSDSTLLKLP

XP_023550518.1 transcription factor CYCLOIDEA-like [Cucurbita pepo subsp. pepo]1.4e-5856.27Show/hide
Query:  LHFPHPFLDDDDLFLSHFLSQQQQQQQLF----------EQEEKKDEVDET------------TRKMKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSK
        LHFPHPFLDD+DLFL+HFLSQQQQQQQ            +QE+++++ D+              R ++ KKKKK S  NSNRKNG S TKR GKKDRHSK
Subjt:  LHFPHPFLDDDDLFLSHFLSQQQQQQQLF----------EQEEKKDEVDET------------TRKMKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSK

Query:  IYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDK
        I TAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS+TIEWLL +SNSAIK LK    +NNSGVSHGS  SG SSEVVS        +++AGG  G+ K K
Subjt:  IYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDK

Query:  KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLDHHLSGNNNNNNNNDTYLDYPTFSCPNSIFLPSPLSLPYSF
        KGRQL+T+GRE+R RARARAR+RT+LK +     PI++  H        N+++T+L+     CP        LS  ++F
Subjt:  KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLDHHLSGNNNNNNNNDTYLDYPTFSCPNSIFLPSPLSLPYSF

TrEMBL top hitse value%identityAlignment
A0A0A0KRR2 TCP domain-containing protein7.8e-8769.35Show/hide
Query:  QLEQYEDQ-FINSYDD---LHFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKKDEVDETTRKMKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYT
        Q +  EDQ  INSYDD    +FPHPFLDDDDLFLSHFLS   QQQQ FEQ ++  ++DETT+KM  KKKKK+ G +S+RKNG + TKRRGKKDRHSKIYT
Subjt:  QLEQYEDQ-FINSYDD---LHFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKKDEVDETTRKMKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYT

Query:  AQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINN-------------QDQEQEEA
        AQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS+TIEWLLLNSNSAIKDLKQ YF   S        SGQSSEVVSEIN+             Q+Q+QE+ 
Subjt:  AQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINN-------------QDQEQEEA

Query:  GGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSGNNN----NNNNNDTYLD-YPTFSCPN-SIFLPSPLSLPYS
          FTG FKDK K R LRTV REARDRARARARQRTLLKNT    PPI         HLSGNNN    +NNNN+TYLD YPTFSCP+ SIFLPSPL LPYS
Subjt:  GGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSGNNN----NNNNNDTYLD-YPTFSCPN-SIFLPSPLSLPYS

Query:  FSDSTLLKLP
        F+DSTLLKLP
Subjt:  FSDSTLLKLP

A0A5D3BKD8 Transcription factor CYCLOIDEA2.8e-8467.19Show/hide
Query:  YQLEQYEDQ--FINSYD--DLH-FPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKKDEVDETTRKMKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKI
        +Q +Q+ +    INSYD  DLH FPHPFLDDDDLFLSHFLS   QQQQ FEQ ++  ++DETT+KM  KKKKK+ G +S+R NG + TKRRGKKDRHSKI
Subjt:  YQLEQYEDQ--FINSYD--DLH-FPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKKDEVDETTRKMKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKI

Query:  YTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEIN--------------NQDQEQ
        YTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS+TIEWLLLNSNSAIKDLKQ YF   S        SGQSSEVVSEIN              +Q Q+Q
Subjt:  YTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEIN--------------NQDQEQ

Query:  EEAGGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSGN--------NNNNNNNDTYLD-YPTFSCP-NSIFLPS
        E+   FTG FKDK K R LRT  REARDRARARARQRTLLKNT    PPI         HLSGN        NNNNNNN+TYLD YPTFSCP +S+FLPS
Subjt:  EEAGGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSGN--------NNNNNNNDTYLD-YPTFSCP-NSIFLPS

Query:  PLSLPYSFSDSTLLKLP
        PL LPYSFSDST+LKLP
Subjt:  PLSLPYSFSDSTLLKLP

A0A6J1EQ72 transcription factor CYCLOIDEA-like7.1e-5654.76Show/hide
Query:  EQYEDQFINSYDDLHFPHPFLDDDDLFLSHFLSQQQQQQQL-----------FEQEEKKDEVDETTRKMK-------------TKKKKKVSGGNSNRKNG
        +Q+E+   +SY  LHFPHPFLDDDDLFL+HFLSQQQ+QQQ             ++E+++D+ D+     K              KKKKK S  NSNRKNG
Subjt:  EQYEDQFINSYDDLHFPHPFLDDDDLFLSHFLSQQQQQQQL-----------FEQEEKKDEVDETTRKMK-------------TKKKKKVSGGNSNRKNG

Query:  RSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQ
         S TKR GKKDRHSKI TAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS+TIEWLL +SNSAIK L     +NNSGVSHGS  SG SSEVVS       
Subjt:  RSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQ

Query:  EQEEAGGFTGSFKDKKGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLDHHLSGNNNNNNNNDTYLDYPTFSCPNSIFLPSPLSLPYSF
         +++AGG  G+ K KKGRQL+T+GRE+R RARARAR+RT+LK +   QP     H+L       N+++T+L+     CP        LS  ++F
Subjt:  EQEEAGGFTGSFKDKKGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLDHHLSGNNNNNNNNDTYLDYPTFSCPNSIFLPSPLSLPYSF

A0A6J1HX83 transcription factor TCP12-like1.8e-5155.72Show/hide
Query:  LHFPHPFLDDDDLFLSHFLSQQQQ-------QQQLFEQEEKKDEVDETTRKMKTKK-------KKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYTAQGPR
        LHFPHPFL DDDLFL+H LSQQQQ        +   +++EK+D+V    ++   KK       KKK    NSNRKNG S TKR  KKDRHSKI TAQGPR
Subjt:  LHFPHPFLDDDDLFLSHFLSQQQQ-------QQQLFEQEEKKDEVDETTRKMKTKK-------KKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYTAQGPR

Query:  DRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDKKGRQLRTV
        DRRMRLSLQIARKFFDLQDMLGFDKAS+TIEWLL +SNSAIK LK    +NNSGVSHGS  SG SSEVVS        +++AGG  G+ K KKGRQL+T+
Subjt:  DRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDKKGRQLRTV

Query:  GREARDRARARARQRTLLKNTSFLQPPINLDHHLSGNNNNNNNNDTYLDYPTFSCPNSIFLPSPLSLPYSF
        GRE+R RARARAR+RT+LK +     PI++  H        N+++T+L+     CP        LS  ++F
Subjt:  GREARDRARARARQRTLLKNTSFLQPPINLDHHLSGNNNNNNNNDTYLDYPTFSCPNSIFLPSPLSLPYSF

A0A6J1IDD5 transcription factor CYCLOIDEA-like1.3e-4955.07Show/hide
Query:  MKQQDIFCCNNNITEINQIVLDHLNPSTSSSMYQLEQYEDQFINSYDDLHFPHPFLDDDDLFLSHFLSQQQ---------QQQQLFEQEEKKDEVDETTR
        M   ++F  NNN T+ N I L H            EQ+E+   N Y  LHFPHPFLD DDLFL+H LS QQ         +Q+Q  E ++ K   ++   
Subjt:  MKQQDIFCCNNNITEINQIVLDHLNPSTSSSMYQLEQYEDQFINSYDDLHFPHPFLDDDDLFLSHFLSQQQ---------QQQQLFEQEEKKDEVDETTR

Query:  KMKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSH
        ++  KKKKK SG   NRKNG S  K+ GKKDRHSKIYTAQGPRDRR+RLSLQIARKFFDLQDMLGFDKAS TIEWLL NS SAIKDL+ +  +NNSG  +
Subjt:  KMKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSH

Query:  GSVYSGQSSEVVSEI---NNQDQEQEEAGGFTGSFKDKKGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINL
        GSV  G S+E VSE+   NN      +   F  + K K+ R LR VGRE+RDRARARARQRT+LK T   QP  NL
Subjt:  GSVYSGQSSEVVSEI---NNQDQEQEEAGGFTGSFKDKKGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINL

SwissProt top hitse value%identityAlignment
A0AQW4 Transcription factor TCP122.7e-2040.95Show/hide
Query:  HFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKKDEVDETTRK------MKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQ
        H+  P       FL  F       Q L +Q++    V E+  K      +K K +K V G  S     R   K   K+DRHSKI TAQGPRDRRMRLSLQ
Subjt:  HFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKKDEVDETTRK------MKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQ

Query:  IARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDKKGRQLRTVGREARDRAR
        IARKFFDLQDMLGFDKAS+TIEWL   S ++IK LK+   ++  G        G+       +   ++E++E      S +  K  +     +E+R+RAR
Subjt:  IARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDKKGRQLRTVGREARDRAR

Query:  ARARQRTLLK
         RAR+RT+ K
Subjt:  ARARQRTLLK

O49250 Transcription factor CYCLOIDEA5.5e-2148.91Show/hide
Query:  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQE
        TK+  KKDRHSKIYT+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK S+T++WLL  S +AIK+L Q    + S  S+ S       EVVS  +    +  
Subjt:  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQE

Query:  EAGGFTGSFKDKKGRQL-RTVGREARDRARARARQRT
        +      + K K+     +   +E+R +ARARAR+RT
Subjt:  EAGGFTGSFKDKKGRQL-RTVGREARDRARARARQRT

Q9SBV6 Transcription factor CYCLOIDEA (Fragment)5.5e-2148.91Show/hide
Query:  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQE
        TK+  KKDRHSKIYT+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK S+T++WLL  S +AIK+L Q    + S  S+ S       EVVS  +    +  
Subjt:  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQE

Query:  EAGGFTGSFKDKKGRQL-RTVGREARDRARARARQRT
        +      + K K+     +   +E+R +ARARAR+RT
Subjt:  EAGGFTGSFKDKKGRQL-RTVGREARDRARARARQRT

Q9SBV9 Transcription factor CYCLOIDEA (Fragment)7.1e-2148.18Show/hide
Query:  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQE
        TK+  KKDRHSKIYT+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK S+T++WLL  S +A+K+L Q    + S  S+ S       EVVS  +    +  
Subjt:  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQE

Query:  EAGGFTGSFKDKKGRQL-RTVGREARDRARARARQRT
        +      + K K+     +   +E+R +ARARAR+RT
Subjt:  EAGGFTGSFKDKKGRQL-RTVGREARDRARARARQRT

Q9SNW8 Transcription factor DICHOTOMA3.0e-1950Show/hide
Query:  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVS-EINNQDQEQE
        K   KKDRHSKI   QGPRDRR+RLS+ IARKFFDLQ+MLGFDK S+T++WLL  S  AIK+L Q+  S+ S +S+    S    EV+S ++      + 
Subjt:  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVS-EINNQDQEQE

Query:  EAGGFTGSFKDKKGRQLRTVGREARDRARARARQRT
        +A     S K K GR    + +E+R +ARARAR+RT
Subjt:  EAGGFTGSFKDKKGRQLRTVGREARDRARARARQRT

Arabidopsis top hitse value%identityAlignment
AT1G67260.1 TCP family transcription factor4.4e-1843.92Show/hide
Query:  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSG-QSSEVVSEINNQDQ---
        K+  KKDRHSKI TAQG RDRR+RLS+ IAR+FFDLQDMLGFDKAS+T++WLL  S  AIK++ Q    NN     G++    +  E   E +N D+   
Subjt:  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSG-QSSEVVSEINNQDQ---

Query:  --------EQEEAGGFTGSFKDKKGRQLRTVGREARD-RARARARQRT
                E+E     T +   KK  +LR +  +    +AR +A++RT
Subjt:  --------EQEEAGGFTGSFKDKKGRQLRTVGREARD-RARARARQRT

AT1G67260.2 TCP family transcription factor4.4e-1843.92Show/hide
Query:  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSG-QSSEVVSEINNQDQ---
        K+  KKDRHSKI TAQG RDRR+RLS+ IAR+FFDLQDMLGFDKAS+T++WLL  S  AIK++ Q    NN     G++    +  E   E +N D+   
Subjt:  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSG-QSSEVVSEINNQDQ---

Query:  --------EQEEAGGFTGSFKDKKGRQLRTVGREARD-RARARARQRT
                E+E     T +   KK  +LR +  +    +AR +A++RT
Subjt:  --------EQEEAGGFTGSFKDKKGRQLRTVGREARD-RARARARQRT

AT1G68800.1 TCP domain protein 121.9e-2140.95Show/hide
Query:  HFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKKDEVDETTRK------MKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQ
        H+  P       FL  F       Q L +Q++    V E+  K      +K K +K V G  S     R   K   K+DRHSKI TAQGPRDRRMRLSLQ
Subjt:  HFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKKDEVDETTRK------MKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQ

Query:  IARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDKKGRQLRTVGREARDRAR
        IARKFFDLQDMLGFDKAS+TIEWL   S ++IK LK+   ++  G        G+       +   ++E++E      S +  K  +     +E+R+RAR
Subjt:  IARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDKKGRQLRTVGREARDRAR

Query:  ARARQRTLLK
         RAR+RT+ K
Subjt:  ARARQRTLLK

AT3G18550.1 TCP family transcription factor1.4e-1131.9Show/hide
Query:  EKKDEVDETTRKMKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQ
        E+  E  ET   ++  ++   S     +K      K+  + DRHSKI TA+G RDRRMRLSL +A++ F LQDMLGFDKAS+T+EWLL  +   I  +  
Subjt:  EKKDEVDETTRKMKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQ

Query:  TYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQ-----------EEAGGFTG------------SFKDKKGRQ------LRTVGREARDRARARARQRTL
        T         HG   SG  S +   + + D              ++ G  T             S + K+ R       L+ + +E R +AR RA+ RT+
Subjt:  TYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQ-----------EEAGGFTG------------SFKDKKGRQ------LRTVGREARDRARARARQRTL

Query:  ------LKNTSFLQPPINLDHHLSGNNNNNNN
              +K  S L   +  D H  G    NNN
Subjt:  ------LKNTSFLQPPINLDHHLSGNNNNNNN

AT3G18550.2 TCP family transcription factor1.1e-1132.89Show/hide
Query:  EKKDEVDETTRKMKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQ
        E+  E  ET   ++  ++   S     +K      K+  + DRHSKI TA+G RDRRMRLSL +A++ F LQDMLGFDKAS+T+EWLL  +   I  +  
Subjt:  EKKDEVDETTRKMKTKKKKKVSGGNSNRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQ

Query:  TYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQ-------EEAGGFTG------------SFKDKKGRQ------LRTVGREARDRARARARQRTL----
        T         HG   SG  S + S   + D  +       ++ G  T             S + K+ R       L+ + +E R +AR RA+ RT+    
Subjt:  TYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQ-------EEAGGFTG------------SFKDKKGRQ------LRTVGREARDRARARARQRTL----

Query:  --LKNTSFLQPPINLDHHLSGNNNNNNN
          +K  S L   +  D H  G    NNN
Subjt:  --LKNTSFLQPPINLDHHLSGNNNNNNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGATGAAACAACAAGATATATTTTGTTGTAACAACAACATCACTGAAATTAATCAAATTGTTTTAGATCATCTAAACCCTAGTACCTCCTCATCAATGTATCA
ACTAGAACAATATGAGGATCAGTTCATCAACTCATATGATGATCTACATTTCCCACATCCTTTTCTCGACGATGATGACCTATTTTTAAGCCACTTTTTATCACAACAGC
AGCAGCAACAACAACTCTTCGAACAAGAAGAAAAAAAAGATGAGGTTGATGAAACAACGAGAAAGATGAAGACGAAGAAGAAGAAGAAAGTAAGCGGTGGTAATAGTAAT
AGAAAAAATGGAAGGAGCTGCACAAAGAGAAGAGGGAAGAAGGACAGACATAGTAAGATCTACACAGCACAAGGCCCAAGAGACCGTAGAATGAGGCTGTCCCTTCAAAT
TGCAAGGAAATTCTTCGACCTTCAAGACATGCTAGGCTTTGACAAAGCTAGCCAAACCATAGAGTGGCTTCTTCTTAACTCAAATTCAGCCATTAAAGATCTCAAACAAA
CCTACTTCTCAAACAATAGTGGGGTTAGCCATGGCAGTGTTTATTCTGGCCAATCAAGTGAGGTTGTGTCAGAGATTAATAATCAAGATCAAGAACAAGAAGAAGCTGGT
GGTTTTACGGGCAGTTTCAAAGACAAAAAGGGCAGGCAATTACGTACTGTTGGTAGAGAGGCAAGGGATAGGGCAAGAGCTAGGGCAAGACAGAGAACACTCTTGAAAAA
TACTTCATTCCTACAGCCTCCTATTAATTTGGATCATCATCTCTCAGGTAATAATAATAATAATAATAATAATGACACCTATCTTGATTATCCAACATTTTCTTGCCCTA
ATTCCATTTTCCTTCCCTCTCCACTTTCCTTACCGTACTCTTTTTCTGATTCCACATTACTCAAATTGCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGATGATGAAACAACAAGATATATTTTGTTGTAACAACAACATCACTGAAATTAATCAAATTGTTTTAGATCATCTAAACCCTAGTACCTCCTCATCAATGTATCA
ACTAGAACAATATGAGGATCAGTTCATCAACTCATATGATGATCTACATTTCCCACATCCTTTTCTCGACGATGATGACCTATTTTTAAGCCACTTTTTATCACAACAGC
AGCAGCAACAACAACTCTTCGAACAAGAAGAAAAAAAAGATGAGGTTGATGAAACAACGAGAAAGATGAAGACGAAGAAGAAGAAGAAAGTAAGCGGTGGTAATAGTAAT
AGAAAAAATGGAAGGAGCTGCACAAAGAGAAGAGGGAAGAAGGACAGACATAGTAAGATCTACACAGCACAAGGCCCAAGAGACCGTAGAATGAGGCTGTCCCTTCAAAT
TGCAAGGAAATTCTTCGACCTTCAAGACATGCTAGGCTTTGACAAAGCTAGCCAAACCATAGAGTGGCTTCTTCTTAACTCAAATTCAGCCATTAAAGATCTCAAACAAA
CCTACTTCTCAAACAATAGTGGGGTTAGCCATGGCAGTGTTTATTCTGGCCAATCAAGTGAGGTTGTGTCAGAGATTAATAATCAAGATCAAGAACAAGAAGAAGCTGGT
GGTTTTACGGGCAGTTTCAAAGACAAAAAGGGCAGGCAATTACGTACTGTTGGTAGAGAGGCAAGGGATAGGGCAAGAGCTAGGGCAAGACAGAGAACACTCTTGAAAAA
TACTTCATTCCTACAGCCTCCTATTAATTTGGATCATCATCTCTCAGGTAATAATAATAATAATAATAATAATGACACCTATCTTGATTATCCAACATTTTCTTGCCCTA
ATTCCATTTTCCTTCCCTCTCCACTTTCCTTACCGTACTCTTTTTCTGATTCCACATTACTCAAATTGCCCTAA
Protein sequenceShow/hide protein sequence
MMMMKQQDIFCCNNNITEINQIVLDHLNPSTSSSMYQLEQYEDQFINSYDDLHFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKKDEVDETTRKMKTKKKKKVSGGNSN
RKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAG
GFTGSFKDKKGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLDHHLSGNNNNNNNNDTYLDYPTFSCPNSIFLPSPLSLPYSFSDSTLLKLP