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CcUC01G006570 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G006570
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 17-like
Genome locationCicolChr01:6864088..6864378
RNA-Seq ExpressionCcUC01G006570
SyntenyCcUC01G006570
Gene Ontology termsGO:0010078 - maintenance of root meristem identity (biological process)
GO:0010088 - phloem development (biological process)
GO:0045595 - regulation of cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR033249 - CLAVATA3/ESR (CLE)-related protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579251.1 hypothetical protein SDJN03_23699, partial [Cucurbita argyrosperma subsp. sororia]6.7e-2069.47Show/hide
Query:  MRVRTETCSRHGAGA--TTALLFFFWVLLILPPASLCLHLPRPPPPPPSRKLARFSAASFRHAPPAT---ELLDRRQSAAD-AAAYGDDKRLIHT
        MRVRT TCSRHGAGA  TTAL+ F WVLLIL PA+  L    PP P   RKL RFS ASFRHAP AT   ELL RRQS+A  AAAYGD+KRLIHT
Subjt:  MRVRTETCSRHGAGA--TTALLFFFWVLLILPPASLCLHLPRPPPPPPSRKLARFSAASFRHAPPAT---ELLDRRQSAAD-AAAYGDDKRLIHT

KAG6601877.1 CLAVATA3/ESR (CLE)-related protein 16, partial [Cucurbita argyrosperma subsp. sororia]5.1e-2065.59Show/hide
Query:  TCSRHGAGATT--ALLFFFWVLLILPPASLCLHLPRPPPPPPSRKLARFSAASFRHAPPATELLDRR-QSAADAAAYGDDKRLIHTGPNPLHN
        T + H + ATT  A L FFWVLLI PP +LCLHL  PPPPP SRKL  FS AS  HA    ELL  R  SAA AA Y DDKRLIHTGPNPLHN
Subjt:  TCSRHGAGATT--ALLFFFWVLLILPPASLCLHLPRPPPPPPSRKLARFSAASFRHAPPATELLDRR-QSAADAAAYGDDKRLIHTGPNPLHN

KAG7016766.1 hypothetical protein SDJN02_21876, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-2672.55Show/hide
Query:  MRVRTETCSRHGAGA--TTALLFFFWVLLILPPASLCLHLPRPPPPPPSRKLARFSAASFRHAPPAT---ELLDRRQSAAD-AAAYGDDKRLIHTGPNPL
        MRVRT TCSRHGAGA  TTAL+ F WVLLIL PA+  L    PP P   RKL RFS ASFRHAPPAT   ELL RRQS+A  AAAYGD+KRLIHTGPNPL
Subjt:  MRVRTETCSRHGAGA--TTALLFFFWVLLILPPASLCLHLPRPPPPPPSRKLARFSAASFRHAPPAT---ELLDRRQSAAD-AAAYGDDKRLIHTGPNPL

Query:  HN
        HN
Subjt:  HN

XP_008437694.1 PREDICTED: CLAVATA3/ESR (CLE)-related protein 17-like [Cucumis melo]2.5e-2772.28Show/hide
Query:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPRPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH
        M  +T T SRH A  TTALL FFWVLLIL P +LCLHL  PPPPPPSRKLARFS ASFRHAPP T     ELLDRRQ    A+AY +DKRLIHTGPNPLH
Subjt:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPRPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH

Query:  N
        N
Subjt:  N

XP_011656246.1 CLAVATA3/ESR (CLE)-related protein 17 [Cucumis sativus]1.6e-2669.31Show/hide
Query:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPRPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH
        M   T T SRH    TTAL  FFWVLLI  P +LCLHL  PPPPPPSRKLARFS A F HAPP T     EL DR QSAA AAAYG++KRLIHTGPNPLH
Subjt:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPRPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH

Query:  N
        N
Subjt:  N

TrEMBL top hitse value%identityAlignment
A0A0A0KSY2 Uncharacterized protein8.0e-2769.31Show/hide
Query:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPRPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH
        M   T T SRH    TTAL  FFWVLLI  P +LCLHL  PPPPPPSRKLARFS A F HAPP T     EL DR QSAA AAAYG++KRLIHTGPNPLH
Subjt:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPRPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH

Query:  N
        N
Subjt:  N

A0A178WDE5 CLE173.9e-0549.18Show/hide
Query:  LHLPRPPPPPPSRKLARFSAASFRHAPPATELLDRRQSAADAAAYGDDKRLIHTGPNPLHN
        LHL   PPPPP RK  R+S A FR      ++            YGDDKR++HTGPNPLHN
Subjt:  LHLPRPPPPPPSRKLARFSAASFRHAPPATELLDRRQSAADAAAYGDDKRLIHTGPNPLHN

A0A1S3AUM2 CLAVATA3/ESR (CLE)-related protein 17-like1.2e-2772.28Show/hide
Query:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPRPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH
        M  +T T SRH A  TTALL FFWVLLIL P +LCLHL  PPPPPPSRKLARFS ASFRHAPP T     ELLDRRQ    A+AY +DKRLIHTGPNPLH
Subjt:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPRPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH

Query:  N
        N
Subjt:  N

A0A5A7TY55 CLAVATA3/ESR (CLE)-related protein 17-like1.2e-2772.28Show/hide
Query:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPRPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH
        M  +T T SRH A  TTALL FFWVLLIL P +LCLHL  PPPPPPSRKLARFS ASFRHAPP T     ELLDRRQ    A+AY +DKRLIHTGPNPLH
Subjt:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPRPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH

Query:  N
        N
Subjt:  N

A0A6J5TNN3 Uncharacterized protein8.6e-0539.62Show/hide
Query:  SRHGAG-ATTALLFFFWVLLILPPAS-LCLHLPRPPPP------------PPSRKLARFSAASFRHAPPATELLDRRQ----SAADAAAYGDDKRLIHTG
        SRHG G A    +FFFWV+LI  P S L +   R                PP+RK       SF +AP +T   D       +      YGDDKR++HTG
Subjt:  SRHGAG-ATTALLFFFWVLLILPPAS-LCLHLPRPPPP------------PPSRKLARFSAASFRHAPPATELLDRRQ----SAADAAAYGDDKRLIHTG

Query:  PNPLHN
        PNPLHN
Subjt:  PNPLHN

SwissProt top hitse value%identityAlignment
Q8L9H6 CLAVATA3/ESR (CLE)-related protein 171.0e-0749.18Show/hide
Query:  LHLPRPPPPPPSRKLARFSAASFRHAPPATELLDRRQSAADAAAYGDDKRLIHTGPNPLHN
        LHL   PPPPP RK  R+S A FR      ++            YGDDKR++HTGPNPLHN
Subjt:  LHLPRPPPPPPSRKLARFSAASFRHAPPATELLDRRQSAADAAAYGDDKRLIHTGPNPLHN

Arabidopsis top hitse value%identityAlignment
AT1G70895.1 CLAVATA3/ESR-RELATED 177.4e-0949.18Show/hide
Query:  LHLPRPPPPPPSRKLARFSAASFRHAPPATELLDRRQSAADAAAYGDDKRLIHTGPNPLHN
        LHL   PPPPP RK  R+S A FR      ++            YGDDKR++HTGPNPLHN
Subjt:  LHLPRPPPPPPSRKLARFSAASFRHAPPATELLDRRQSAADAAAYGDDKRLIHTGPNPLHN

AT1G70895.2 CLAVATA3/ESR-RELATED 177.4e-0949.18Show/hide
Query:  LHLPRPPPPPPSRKLARFSAASFRHAPPATELLDRRQSAADAAAYGDDKRLIHTGPNPLHN
        LHL   PPPPP RK  R+S A FR      ++            YGDDKR++HTGPNPLHN
Subjt:  LHLPRPPPPPPSRKLARFSAASFRHAPPATELLDRRQSAADAAAYGDDKRLIHTGPNPLHN

AT2G01505.1 CLAVATA3/ESR-RELATED 165.5e-0443.28Show/hide
Query:  ASLCLHLPRPPPPPPSRKLARFSAASFRHAPPATELL--DRRQSAADAAAYGDDKRLIHTGPNPLHN
        +S  L  P   P  P RK   F   +   AP AT      RR+       Y DDKRL+HTGPNPLHN
Subjt:  ASLCLHLPRPPPPPPSRKLARFSAASFRHAPPATELL--DRRQSAADAAAYGDDKRLIHTGPNPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTACGAACCGAAACCTGCAGTCGCCACGGTGCCGGAGCCACCACCGCGCTTCTTTTCTTCTTCTGGGTCCTTCTCATTTTACCTCCGGCTAGCCTCTGT
CTTCACCTGCCACGGCCACCGCCGCCGCCACCGTCGAGGAAATTAGCCCGATTCTCCGCGGCATCGTTTCGCCATGCACCGCCTGCAACTGAGCTTCTCGACCGC
CGTCAGTCAGCCGCCGACGCCGCCGCTTACGGCGACGACAAACGGTTAATTCATACGGGTCCGAATCCTCTTCACAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTACGAACCGAAACCTGCAGTCGCCACGGTGCCGGAGCCACCACCGCGCTTCTTTTCTTCTTCTGGGTCCTTCTCATTTTACCTCCGGCTAGCCTCTGT
CTTCACCTGCCACGGCCACCGCCGCCGCCACCGTCGAGGAAATTAGCCCGATTCTCCGCGGCATCGTTTCGCCATGCACCGCCTGCAACTGAGCTTCTCGACCGC
CGTCAGTCAGCCGCCGACGCCGCCGCTTACGGCGACGACAAACGGTTAATTCATACGGGTCCGAATCCTCTTCACAACTAA
Protein sequenceShow/hide protein sequence
MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPRPPPPPPSRKLARFSAASFRHAPPATELLDRRQSAADAAAYGDDKRLIHTGPNPLHN