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CcUC01G006580 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G006580
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 17-like
Genome locationCicolChr01:6864769..6865059
RNA-Seq ExpressionCcUC01G006580
SyntenyCcUC01G006580
Gene Ontology termsGO:0010078 - maintenance of root meristem identity (biological process)
GO:0010088 - phloem development (biological process)
GO:0045595 - regulation of cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR033249 - CLAVATA3/ESR (CLE)-related protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579251.1 hypothetical protein SDJN03_23699, partial [Cucurbita argyrosperma subsp. sororia]2.3e-2070.53Show/hide
Query:  MRVRTETCSRHGAGA--TTALLFFFWVLLILPPASLCLHLPLPPPPPPSRKLARFSAASFRHAPPAT---ELLDRRQSAAD-AAAYGDDKRLIHT
        MRVRT TCSRHGAGA  TTAL+ F WVLLIL PA+  L   LPP P   RKL RFS ASFRHAP AT   ELL RRQS+A  AAAYGD+KRLIHT
Subjt:  MRVRTETCSRHGAGA--TTALLFFFWVLLILPPASLCLHLPLPPPPPPSRKLARFSAASFRHAPPAT---ELLDRRQSAAD-AAAYGDDKRLIHT

KAG6601877.1 CLAVATA3/ESR (CLE)-related protein 16, partial [Cucurbita argyrosperma subsp. sororia]6.7e-2065.59Show/hide
Query:  TCSRHGAGATT--ALLFFFWVLLILPPASLCLHLPLPPPPPPSRKLARFSAASFRHAPPATELLDRR-QSAADAAAYGDDKRLIHTGPNPLHN
        T + H + ATT  A L FFWVLLI PP +LCLH  LPPPPP SRKL  FS AS  HA    ELL  R  SAA AA Y DDKRLIHTGPNPLHN
Subjt:  TCSRHGAGATT--ALLFFFWVLLILPPASLCLHLPLPPPPPPSRKLARFSAASFRHAPPATELLDRR-QSAADAAAYGDDKRLIHTGPNPLHN

KAG7016766.1 hypothetical protein SDJN02_21876, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-2673.53Show/hide
Query:  MRVRTETCSRHGAGA--TTALLFFFWVLLILPPASLCLHLPLPPPPPPSRKLARFSAASFRHAPPAT---ELLDRRQSAAD-AAAYGDDKRLIHTGPNPL
        MRVRT TCSRHGAGA  TTAL+ F WVLLIL PA+  L   LPP P   RKL RFS ASFRHAPPAT   ELL RRQS+A  AAAYGD+KRLIHTGPNPL
Subjt:  MRVRTETCSRHGAGA--TTALLFFFWVLLILPPASLCLHLPLPPPPPPSRKLARFSAASFRHAPPAT---ELLDRRQSAAD-AAAYGDDKRLIHTGPNPL

Query:  HN
        HN
Subjt:  HN

XP_008437694.1 PREDICTED: CLAVATA3/ESR (CLE)-related protein 17-like [Cucumis melo]3.3e-2772.28Show/hide
Query:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPLPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH
        M  +T T SRH A  TTALL FFWVLLIL P +LCLH  LPPPPPPSRKLARFS ASFRHAPP T     ELLDRRQ    A+AY +DKRLIHTGPNPLH
Subjt:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPLPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH

Query:  N
        N
Subjt:  N

XP_011656246.1 CLAVATA3/ESR (CLE)-related protein 17 [Cucumis sativus]2.2e-2669.31Show/hide
Query:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPLPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH
        M   T T SRH    TTAL  FFWVLLI  P +LCLH  LPPPPPPSRKLARFS A F HAPP T     EL DR QSAA AAAYG++KRLIHTGPNPLH
Subjt:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPLPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH

Query:  N
        N
Subjt:  N

TrEMBL top hitse value%identityAlignment
A0A0A0KSY2 Uncharacterized protein1.0e-2669.31Show/hide
Query:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPLPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH
        M   T T SRH    TTAL  FFWVLLI  P +LCLH  LPPPPPPSRKLARFS A F HAPP T     EL DR QSAA AAAYG++KRLIHTGPNPLH
Subjt:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPLPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH

Query:  N
        N
Subjt:  N

A0A178WDE5 CLE173.9e-0549.18Show/hide
Query:  LHLPLPPPPPPSRKLARFSAASFRHAPPATELLDRRQSAADAAAYGDDKRLIHTGPNPLHN
        LHL   PPPPP RK  R+S A FR      ++            YGDDKR++HTGPNPLHN
Subjt:  LHLPLPPPPPPSRKLARFSAASFRHAPPATELLDRRQSAADAAAYGDDKRLIHTGPNPLHN

A0A1S3AUM2 CLAVATA3/ESR (CLE)-related protein 17-like1.6e-2772.28Show/hide
Query:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPLPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH
        M  +T T SRH A  TTALL FFWVLLIL P +LCLH  LPPPPPPSRKLARFS ASFRHAPP T     ELLDRRQ    A+AY +DKRLIHTGPNPLH
Subjt:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPLPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH

Query:  N
        N
Subjt:  N

A0A2K1ZGE7 Uncharacterized protein3.3e-0442.86Show/hide
Query:  RHGAGATTALLFFFWVLLILPPASLCL---HLPLPPPPPPSRKLARFSAASFRHAPPATEL-LDRRQSAADAAAYGDDKRLIHTGPNPLHN
        R  +GA  A++F FW+LLIL    L +   H           + ARF    F HAPP+ +  LD  +   D   Y DDKR+IHTGPNPLHN
Subjt:  RHGAGATTALLFFFWVLLILPPASLCL---HLPLPPPPPPSRKLARFSAASFRHAPPATEL-LDRRQSAADAAAYGDDKRLIHTGPNPLHN

A0A5A7TY55 CLAVATA3/ESR (CLE)-related protein 17-like1.6e-2772.28Show/hide
Query:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPLPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH
        M  +T T SRH A  TTALL FFWVLLIL P +LCLH  LPPPPPPSRKLARFS ASFRHAPP T     ELLDRRQ    A+AY +DKRLIHTGPNPLH
Subjt:  MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPLPPPPPPSRKLARFSAASFRHAPPAT-----ELLDRRQSAADAAAYGDDKRLIHTGPNPLH

Query:  N
        N
Subjt:  N

SwissProt top hitse value%identityAlignment
Q8L9H6 CLAVATA3/ESR (CLE)-related protein 171.0e-0749.18Show/hide
Query:  LHLPLPPPPPPSRKLARFSAASFRHAPPATELLDRRQSAADAAAYGDDKRLIHTGPNPLHN
        LHL   PPPPP RK  R+S A FR      ++            YGDDKR++HTGPNPLHN
Subjt:  LHLPLPPPPPPSRKLARFSAASFRHAPPATELLDRRQSAADAAAYGDDKRLIHTGPNPLHN

Arabidopsis top hitse value%identityAlignment
AT1G70895.1 CLAVATA3/ESR-RELATED 177.4e-0949.18Show/hide
Query:  LHLPLPPPPPPSRKLARFSAASFRHAPPATELLDRRQSAADAAAYGDDKRLIHTGPNPLHN
        LHL   PPPPP RK  R+S A FR      ++            YGDDKR++HTGPNPLHN
Subjt:  LHLPLPPPPPPSRKLARFSAASFRHAPPATELLDRRQSAADAAAYGDDKRLIHTGPNPLHN

AT1G70895.2 CLAVATA3/ESR-RELATED 177.4e-0949.18Show/hide
Query:  LHLPLPPPPPPSRKLARFSAASFRHAPPATELLDRRQSAADAAAYGDDKRLIHTGPNPLHN
        LHL   PPPPP RK  R+S A FR      ++            YGDDKR++HTGPNPLHN
Subjt:  LHLPLPPPPPPSRKLARFSAASFRHAPPATELLDRRQSAADAAAYGDDKRLIHTGPNPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTACGAACCGAAACCTGCAGTCGCCACGGTGCCGGAGCCACCACCGCGCTTCTTTTCTTCTTCTGGGTCCTTCTCATTTTACCTCCGGCTAGCCTCTGTCTTCA
CCTGCCACTGCCACCGCCGCCGCCACCGTCGAGGAAATTAGCCCGATTCTCCGCGGCATCGTTTCGCCATGCACCGCCTGCAACTGAGCTTCTCGACCGCCGTCAGTCAG
CCGCCGACGCCGCCGCTTACGGCGACGACAAACGGTTAATTCATACGGGTCCGAATCCTCTTCACAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTACGAACCGAAACCTGCAGTCGCCACGGTGCCGGAGCCACCACCGCGCTTCTTTTCTTCTTCTGGGTCCTTCTCATTTTACCTCCGGCTAGCCTCTGTCTTCA
CCTGCCACTGCCACCGCCGCCGCCACCGTCGAGGAAATTAGCCCGATTCTCCGCGGCATCGTTTCGCCATGCACCGCCTGCAACTGAGCTTCTCGACCGCCGTCAGTCAG
CCGCCGACGCCGCCGCTTACGGCGACGACAAACGGTTAATTCATACGGGTCCGAATCCTCTTCACAACTAA
Protein sequenceShow/hide protein sequence
MRVRTETCSRHGAGATTALLFFFWVLLILPPASLCLHLPLPPPPPPSRKLARFSAASFRHAPPATELLDRRQSAADAAAYGDDKRLIHTGPNPLHN