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CcUC01G007750 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G007750
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationCicolChr01:8223827..8224303
RNA-Seq ExpressionCcUC01G007750
SyntenyCcUC01G007750
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]4.1e-5985.71Show/hide
Query:  MNELHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLFLQNAFPRTALL
        MNEL+SFITAINERNP INSLPICI MQRP PANSS+T+NN+GKTILGLTFQAVLALFI++P+SSPP LTHLF AAVLISFAVSFAG+FLQN FPR ALL
Subjt:  MNELHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLFLQNAFPRTALL

Query:  FEKIGALIAAIGVCIIASLLLIHQNFAWISCLACGLSLMAFILSFRG
        FEKIGALIAAIGVCI+AS LLIHQNFAWIS LA G SLMAF+LSFRG
Subjt:  FEKIGALIAAIGVCIIASLLLIHQNFAWISCLACGLSLMAFILSFRG

KAG6579136.1 hypothetical protein SDJN03_23584, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3255.41Show/hide
Query:  MESSSQQISLNMNELHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLF
        M S+ Q +S++MN+  S    I   + G++  P              + +NNLGK + GLTFQAVLALFISTP+S PP L +LF AA+LIS A+S A LF
Subjt:  MESSSQQISLNMNELHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLF

Query:  LQNAFPRTALLFEKIGALIAAIGVCIIASLLLIHQNFAWISCLACGLSLMAFILSFR
        LQ AFPR AL F KIGA++AA+G CI+ASLLL HQNF+WI  LACG +LMAFILSF+
Subjt:  LQNAFPRTALLFEKIGALIAAIGVCIIASLLLIHQNFAWISCLACGLSLMAFILSFR

KAG6579137.1 hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3456.69Show/hide
Query:  MESSSQQISLNMNELHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLF
        M S+ Q +S++MN+    I   ++  P   ++P     + PPP +SS+T+NNLGK + GLTFQAVLALFIS P+S PP L H+F AA+LISFA+S A LF
Subjt:  MESSSQQISLNMNELHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLF

Query:  LQNAFPRTALLFEKIGALIAAIGVCIIASLLLIHQNFAWISCLACGLSLMAFILSFR
        LQ A+PR AL   KIGAL+AAIG C I S+LL HQ+F+WI  LACG +LMAFILSF+
Subjt:  LQNAFPRTALLFEKIGALIAAIGVCIIASLLLIHQNFAWISCLACGLSLMAFILSFR

KGN49803.1 hypothetical protein Csa_004681 [Cucumis sativus]2.4e-5981.01Show/hide
Query:  MESSSQQISLNMNELHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLF
        MESSSQQIS++MN L+S IT+INERNP IN LPICIIMQ   PANSS+T+NN+G TILGLTFQAVLALFI++ +SSPP LTHLFGAAVLISFAVSF G+F
Subjt:  MESSSQQISLNMNELHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLF

Query:  LQNAFPRTALLFEKIGALIAAIGVCIIASLLLIHQNFAWISCLACGLSLMAFILSFRG
        LQ+ FPR ALLFEKIGALIAAIGVCI+AS LLIHQNFAWIS LACG SLMAF+LSFRG
Subjt:  LQNAFPRTALLFEKIGALIAAIGVCIIASLLLIHQNFAWISCLACGLSLMAFILSFRG

KGN49808.1 hypothetical protein Csa_004650 [Cucumis sativus]4.5e-3758.18Show/hide
Query:  MESSSQQISLNMNELHSFITAINERNPGI-------NSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFIST-PSSSPPFLTHLFGAAVLISF
        M S+S Q SL+M+   SFI  I++RN G+       N LP+ I MQ+ P A +  +Q  LGK IL L+FQAVLALFIS+ P+S PP L H F AAV ISF
Subjt:  MESSSQQISLNMNELHSFITAINERNPGI-------NSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFIST-PSSSPPFLTHLFGAAVLISF

Query:  AVSFAGLFLQNAFPRTALLFEKIGALIAAIGVCIIASLLLIHQNFAWISCLACGLSLMAFILSFR
        AVSFA LFL N+FPRTA LFEK+GAL +A GVC IAS LL+HQNFAWI  +AC  S++ F LSF+
Subjt:  AVSFAGLFLQNAFPRTALLFEKIGALIAAIGVCIIASLLLIHQNFAWISCLACGLSLMAFILSFR

TrEMBL top hitse value%identityAlignment
A0A0A0KJN8 Uncharacterized protein1.2e-5981.01Show/hide
Query:  MESSSQQISLNMNELHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLF
        MESSSQQIS++MN L+S IT+INERNP IN LPICIIMQ   PANSS+T+NN+G TILGLTFQAVLALFI++ +SSPP LTHLFGAAVLISFAVSF G+F
Subjt:  MESSSQQISLNMNELHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLF

Query:  LQNAFPRTALLFEKIGALIAAIGVCIIASLLLIHQNFAWISCLACGLSLMAFILSFRG
        LQ+ FPR ALLFEKIGALIAAIGVCI+AS LLIHQNFAWIS LACG SLMAF+LSFRG
Subjt:  LQNAFPRTALLFEKIGALIAAIGVCIIASLLLIHQNFAWISCLACGLSLMAFILSFRG

A0A0A0KJP2 Uncharacterized protein2.2e-3758.18Show/hide
Query:  MESSSQQISLNMNELHSFITAINERNPGI-------NSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFIST-PSSSPPFLTHLFGAAVLISF
        M S+S Q SL+M+   SFI  I++RN G+       N LP+ I MQ+ P A +  +Q  LGK IL L+FQAVLALFIS+ P+S PP L H F AAV ISF
Subjt:  MESSSQQISLNMNELHSFITAINERNPGI-------NSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFIST-PSSSPPFLTHLFGAAVLISF

Query:  AVSFAGLFLQNAFPRTALLFEKIGALIAAIGVCIIASLLLIHQNFAWISCLACGLSLMAFILSFR
        AVSFA LFL N+FPRTA LFEK+GAL +A GVC IAS LL+HQNFAWI  +AC  S++ F LSF+
Subjt:  AVSFAGLFLQNAFPRTALLFEKIGALIAAIGVCIIASLLLIHQNFAWISCLACGLSLMAFILSFR

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter2.0e-5985.71Show/hide
Query:  MNELHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLFLQNAFPRTALL
        MNEL+SFITAINERNP INSLPICI MQRP PANSS+T+NN+GKTILGLTFQAVLALFI++P+SSPP LTHLF AAVLISFAVSFAG+FLQN FPR ALL
Subjt:  MNELHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLFLQNAFPRTALL

Query:  FEKIGALIAAIGVCIIASLLLIHQNFAWISCLACGLSLMAFILSFRG
        FEKIGALIAAIGVCI+AS LLIHQNFAWIS LA G SLMAF+LSFRG
Subjt:  FEKIGALIAAIGVCIIASLLLIHQNFAWISCLACGLSLMAFILSFRG

A0A5D3BEH8 Putative Ileal sodium/bile acid cotransporter4.8e-2950.6Show/hide
Query:  ESSSQQISLNMNELHSFITAINERNPGINS----------LPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAAVLIS
        E+   +ISL+MNEL+SFITA+  RNPGI+S          LPI I MQRP P NS +     G T +   FQA+L LF++ P S PP L+ L G  +L +
Subjt:  ESSSQQISLNMNELHSFITAINERNPGINS----------LPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAAVLIS

Query:  FAVSFAGLFLQNAFPRTALLFEKIGALIAAIGVCIIASLLLIHQNFAWISCLACGLSLMAFILSFR
        F  SF G+ LQ  FP+ A L +  GAL+AAIGVCI+ S LL H N  WI  LACGL L AFI SF+
Subjt:  FAVSFAGLFLQNAFPRTALLFEKIGALIAAIGVCIIASLLLIHQNFAWISCLACGLSLMAFILSFR

A0A6J1CY58 uncharacterized protein LOC1110156586.1e-3269.29Show/hide
Query:  MESSSQQISLNMNELHSFITAINERNPGINS-------------LPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAA
        M S+ QQ S++MN L SFITAINERN GI+S             LPICI MQRPPPA SS+   +LGKTILGLTFQAVLALFIS PSS P   T LFGAA
Subjt:  MESSSQQISLNMNELHSFITAINERNPGINS-------------LPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAA

Query:  VLISFAVSFAGLFLQNAFPRTALLFEK
        VLISFAVSFAGLFLQ A+PR ALLFEK
Subjt:  VLISFAVSFAGLFLQNAFPRTALLFEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCAAGTTCACAGCAAATTTCCCTAAATATGAATGAACTTCATTCCTTCATCACAGCAATTAATGAAAGAAATCCTGGAATCAACAGCTTACCAATTTGTATAAT
AATGCAGAGGCCTCCACCAGCCAACAGCTCTGAGACTCAGAATAATCTTGGGAAGACAATTCTTGGCCTTACTTTTCAGGCAGTTTTAGCCTTGTTCATTAGCACACCCA
GTTCATCCCCTCCATTTTTGACACATCTCTTTGGTGCTGCAGTCTTGATTAGCTTTGCAGTTTCATTTGCTGGACTTTTCCTTCAAAATGCATTCCCGAGAACCGCACTT
TTGTTTGAAAAGATCGGTGCTCTTATCGCTGCAATTGGTGTGTGCATCATAGCAAGTCTTCTTCTAATCCATCAGAACTTTGCCTGGATCTCTTGCCTGGCATGTGGCTT
GTCCTTGATGGCTTTTATTCTATCATTTAGAGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATCAAGTTCACAGCAAATTTCCCTAAATATGAATGAACTTCATTCCTTCATCACAGCAATTAATGAAAGAAATCCTGGAATCAACAGCTTACCAATTTGTATAAT
AATGCAGAGGCCTCCACCAGCCAACAGCTCTGAGACTCAGAATAATCTTGGGAAGACAATTCTTGGCCTTACTTTTCAGGCAGTTTTAGCCTTGTTCATTAGCACACCCA
GTTCATCCCCTCCATTTTTGACACATCTCTTTGGTGCTGCAGTCTTGATTAGCTTTGCAGTTTCATTTGCTGGACTTTTCCTTCAAAATGCATTCCCGAGAACCGCACTT
TTGTTTGAAAAGATCGGTGCTCTTATCGCTGCAATTGGTGTGTGCATCATAGCAAGTCTTCTTCTAATCCATCAGAACTTTGCCTGGATCTCTTGCCTGGCATGTGGCTT
GTCCTTGATGGCTTTTATTCTATCATTTAGAGGGTAG
Protein sequenceShow/hide protein sequence
MESSSQQISLNMNELHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLFLQNAFPRTAL
LFEKIGALIAAIGVCIIASLLLIHQNFAWISCLACGLSLMAFILSFRG