; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G007790 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G007790
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationCicolChr01:8247143..8247640
RNA-Seq ExpressionCcUC01G007790
SyntenyCcUC01G007790
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]3.4e-4066.89Show/hide
Query:  SFSPTINQRNYGISIFSTPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFISSPTSSPPFLTHLFGAAVLISFAVSFAALFLQNSFPRIA
        SF   IN+RN  I       + LPICITM +   A  S +  ++GKTILGLTFQA+LALFI+SP SSPP LTHLF AAVLISFAVSFA +FLQN FPRIA
Subjt:  SFSPTINQRNYGISIFSTPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFISSPTSSPPFLTHLFGAAVLISFAVSFAALFLQNSFPRIA

Query:  RLFEKIGALFAAIGVCIIASFLLVHQNFAWICWLACAFSFIVFGLSFK
         LFEKIGAL AAIGVCI+AS LL+HQNFAWI WLA  FS + F LSF+
Subjt:  RLFEKIGALFAAIGVCIIASFLLVHQNFAWICWLACAFSFIVFGLSFK

KAG6579132.1 hypothetical protein SDJN03_23580, partial [Cucurbita argyrosperma subsp. sororia]4.8e-3462.88Show/hide
Query:  FSTPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFISSPTSSPPFLTHLFGAAVLISFAVSFAALFLQNSFPRIARLFEKIGALFAAIGV
        FSTP DCLP  I   +  +  P     ++GK I+GLT QA+LA+FISSP+SSPP L  LFGA + ISF +SFA +FL+N+FP+ ARLFEK+GALFAAIGV
Subjt:  FSTPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFISSPTSSPPFLTHLFGAAVLISFAVSFAALFLQNSFPRIARLFEKIGALFAAIGV

Query:  CIIASFLLVHQNFAWICWLACAFSFIVFGLSF
         IIASFLL+H+N+AWI  LAC FS IVFGLS+
Subjt:  CIIASFLLVHQNFAWICWLACAFSFIVFGLSF

KGN49803.1 hypothetical protein Csa_004681 [Cucumis sativus]1.2e-4063.64Show/hide
Query:  MASTSHQTSLDMNALSSSFSPTINQRNYGISIFSTPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFISSPTSSPPFLTHLFGAAVLISF
        M S+S Q S+DMN L S  + +IN+RN  I       + LPICI M  +  A  S +  ++G TILGLTFQA+LALFI+S TSSPP LTHLFGAAVLISF
Subjt:  MASTSHQTSLDMNALSSSFSPTINQRNYGISIFSTPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFISSPTSSPPFLTHLFGAAVLISF

Query:  AVSFAALFLQNSFPRIARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWLACAFSFIVFGLSFK
        AVSF  +FLQ+ FPRIA LFEKIGAL AAIGVCI+AS LL+HQNFAWI WLAC FS + F LSF+
Subjt:  AVSFAALFLQNSFPRIARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWLACAFSFIVFGLSFK

KGN49808.1 hypothetical protein Csa_004650 [Cucumis sativus]5.5e-5474.7Show/hide
Query:  MASTSHQTSLDMNALSSSFSPTINQRNYGISIFSTPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFISS-PTSSPPFLTHLFGAAVLIS
        MASTSHQTSLDM+A  SSF  TI+QRNYG+    TPS+CLP+ I M QSPQAT  SS Q LGK IL L+FQA+LALFISS PTS PP L H F AAV IS
Subjt:  MASTSHQTSLDMNALSSSFSPTINQRNYGISIFSTPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFISS-PTSSPPFLTHLFGAAVLIS

Query:  FAVSFAALFLQNSFPRIARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWLACAFSFIVFGLSFK
        FAVSFAALFL NSFPR A LFEK+GALF+A GVC IASFLLVHQNFAWICW+AC FS IVF LSFK
Subjt:  FAVSFAALFLQNSFPRIARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWLACAFSFIVFGLSFK

XP_022146444.1 uncharacterized protein LOC111015658 [Momordica charantia]1.1e-3067.97Show/hide
Query:  MASTSHQTSLDMNALSSSFSPTINQRNYGISIF------STPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFISSPTSSPPFLTHLFGA
        MAST  QTS+DMNAL SSF   IN+RN GIS F      STPSDCLPICI M + P   P+ S Q LGKTILGLTFQA+LALFIS P+S P   T LFGA
Subjt:  MASTSHQTSLDMNALSSSFSPTINQRNYGISIF------STPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFISSPTSSPPFLTHLFGA

Query:  AVLISFAVSFAALFLQNSFPRIARLFEK
        AVLISFAVSFA LFLQ ++PR+A LFEK
Subjt:  AVLISFAVSFAALFLQNSFPRIARLFEK

TrEMBL top hitse value%identityAlignment
A0A0A0KJN8 Uncharacterized protein5.7e-4163.64Show/hide
Query:  MASTSHQTSLDMNALSSSFSPTINQRNYGISIFSTPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFISSPTSSPPFLTHLFGAAVLISF
        M S+S Q S+DMN L S  + +IN+RN  I       + LPICI M  +  A  S +  ++G TILGLTFQA+LALFI+S TSSPP LTHLFGAAVLISF
Subjt:  MASTSHQTSLDMNALSSSFSPTINQRNYGISIFSTPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFISSPTSSPPFLTHLFGAAVLISF

Query:  AVSFAALFLQNSFPRIARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWLACAFSFIVFGLSFK
        AVSF  +FLQ+ FPRIA LFEKIGAL AAIGVCI+AS LL+HQNFAWI WLAC FS + F LSF+
Subjt:  AVSFAALFLQNSFPRIARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWLACAFSFIVFGLSFK

A0A0A0KJP2 Uncharacterized protein2.7e-5474.7Show/hide
Query:  MASTSHQTSLDMNALSSSFSPTINQRNYGISIFSTPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFISS-PTSSPPFLTHLFGAAVLIS
        MASTSHQTSLDM+A  SSF  TI+QRNYG+    TPS+CLP+ I M QSPQAT  SS Q LGK IL L+FQA+LALFISS PTS PP L H F AAV IS
Subjt:  MASTSHQTSLDMNALSSSFSPTINQRNYGISIFSTPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFISS-PTSSPPFLTHLFGAAVLIS

Query:  FAVSFAALFLQNSFPRIARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWLACAFSFIVFGLSFK
        FAVSFAALFL NSFPR A LFEK+GALF+A GVC IASFLLVHQNFAWICW+AC FS IVF LSFK
Subjt:  FAVSFAALFLQNSFPRIARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWLACAFSFIVFGLSFK

A0A0A0KQ03 Uncharacterized protein1.9e-2350.59Show/hide
Query:  MAST-SHQTSLDMNALSSSFSPTINQRNYGISIFS---TPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFIS-SPTSSPPFLTHLFGAA
        MA T  H+ SLDMN L+S      N RN GIS  +     SDCLPI I M Q P  +P +SPQ  G T L LTFQAI+ LF+S +P+SS P  + LF A 
Subjt:  MAST-SHQTSLDMNALSSSFSPTINQRNYGISIFS---TPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFIS-SPTSSPPFLTHLFGAA

Query:  VLISFAVSFAALFLQNSFPRIARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWLACAFSFIVFGLSFK
        +L SF  S+  + LQ  FP+ A+L +  GALFAAIG CII S LL++ NF WICWLA       F +SFK
Subjt:  VLISFAVSFAALFLQNSFPRIARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWLACAFSFIVFGLSFK

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter1.7e-4066.89Show/hide
Query:  SFSPTINQRNYGISIFSTPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFISSPTSSPPFLTHLFGAAVLISFAVSFAALFLQNSFPRIA
        SF   IN+RN  I       + LPICITM +   A  S +  ++GKTILGLTFQA+LALFI+SP SSPP LTHLF AAVLISFAVSFA +FLQN FPRIA
Subjt:  SFSPTINQRNYGISIFSTPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFISSPTSSPPFLTHLFGAAVLISFAVSFAALFLQNSFPRIA

Query:  RLFEKIGALFAAIGVCIIASFLLVHQNFAWICWLACAFSFIVFGLSFK
         LFEKIGAL AAIGVCI+AS LL+HQNFAWI WLA  FS + F LSF+
Subjt:  RLFEKIGALFAAIGVCIIASFLLVHQNFAWICWLACAFSFIVFGLSFK

A0A6J1CY58 uncharacterized protein LOC1110156585.4e-3167.97Show/hide
Query:  MASTSHQTSLDMNALSSSFSPTINQRNYGISIF------STPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFISSPTSSPPFLTHLFGA
        MAST  QTS+DMNAL SSF   IN+RN GIS F      STPSDCLPICI M + P   P+ S Q LGKTILGLTFQA+LALFIS P+S P   T LFGA
Subjt:  MASTSHQTSLDMNALSSSFSPTINQRNYGISIF------STPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFISSPTSSPPFLTHLFGA

Query:  AVLISFAVSFAALFLQNSFPRIARLFEK
        AVLISFAVSFA LFLQ ++PR+A LFEK
Subjt:  AVLISFAVSFAALFLQNSFPRIARLFEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAACTTCACACCAAACCTCTTTAGATATGAATGCACTTTCCTCCTCCTTTAGCCCTACAATCAACCAAAGAAACTATGGAATCAGCATCTTCTCCACACCATC
AGATTGTTTACCAATTTGCATTACAATGCTACAAAGCCCTCAAGCAACACCCAGTAGTAGCCCTCAAGATCTTGGCAAGACAATTCTTGGGCTTACTTTTCAAGCAATTT
TGGCCTTGTTCATCAGCTCACCAACTTCTTCTCCTCCATTTTTGACTCATCTTTTTGGTGCTGCTGTTTTGATTAGCTTTGCAGTTTCATTTGCTGCTCTTTTCCTTCAA
AACTCGTTCCCGAGAATCGCCCGTTTGTTCGAAAAGATCGGTGCGCTTTTTGCTGCCATTGGTGTGTGTATCATAGCAAGTTTTCTTCTAGTCCATCAGAACTTTGCTTG
GATATGTTGGTTGGCATGTGCCTTCTCCTTCATTGTCTTTGGTCTATCATTTAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAACTTCACACCAAACCTCTTTAGATATGAATGCACTTTCCTCCTCCTTTAGCCCTACAATCAACCAAAGAAACTATGGAATCAGCATCTTCTCCACACCATC
AGATTGTTTACCAATTTGCATTACAATGCTACAAAGCCCTCAAGCAACACCCAGTAGTAGCCCTCAAGATCTTGGCAAGACAATTCTTGGGCTTACTTTTCAAGCAATTT
TGGCCTTGTTCATCAGCTCACCAACTTCTTCTCCTCCATTTTTGACTCATCTTTTTGGTGCTGCTGTTTTGATTAGCTTTGCAGTTTCATTTGCTGCTCTTTTCCTTCAA
AACTCGTTCCCGAGAATCGCCCGTTTGTTCGAAAAGATCGGTGCGCTTTTTGCTGCCATTGGTGTGTGTATCATAGCAAGTTTTCTTCTAGTCCATCAGAACTTTGCTTG
GATATGTTGGTTGGCATGTGCCTTCTCCTTCATTGTCTTTGGTCTATCATTTAAGTAA
Protein sequenceShow/hide protein sequence
MASTSHQTSLDMNALSSSFSPTINQRNYGISIFSTPSDCLPICITMLQSPQATPSSSPQDLGKTILGLTFQAILALFISSPTSSPPFLTHLFGAAVLISFAVSFAALFLQ
NSFPRIARLFEKIGALFAAIGVCIIASFLLVHQNFAWICWLACAFSFIVFGLSFK