; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G008580 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G008580
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionPrefoldin subunit
Genome locationCicolChr01:9187319..9193150
RNA-Seq ExpressionCcUC01G008580
SyntenyCcUC01G008580
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006457 - protein folding (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016272 - prefoldin complex (cellular component)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR004127 - Prefoldin alpha-like
IPR009053 - Prefoldin
IPR011599 - Prefoldin alpha subunit, archaea-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149870.1 probable prefoldin subunit 5 [Cucumis sativus]1.4e-7093.08Show/hide
Query:  MASRK-GSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDV
        MASRK GSS GEG RSLELELEKMSVEQL+A KEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGK+MLVPLTASLYVPGTLDEADKVLVDV
Subjt:  MASRK-GSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDV

Query:  GTGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAAT
        GTGYFIEKTMA+GKDYC+RKIKLLRSNFDQLIEIATKKKKVADEAG+ILQAKL+QM AT
Subjt:  GTGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAAT

XP_022938455.1 probable prefoldin subunit 5 [Cucurbita moschata]2.1e-7194.97Show/hide
Query:  MASRKGSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG
        MASRKG SAGEG RS  LELEKMSVEQLKA KEQ DMEVNLLHDSLNNIRTATSRLDIA+AALHDLSLRPQGKKMLVPLTASLYVPGTLD+ADKVLVDVG
Subjt:  MASRKGSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG

Query:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT
        TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT
Subjt:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT

XP_022993145.1 probable prefoldin subunit 5 [Cucurbita maxima]4.0e-7093.71Show/hide
Query:  MASRKGSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG
        MASRKG SAGEG RS  LELEKMSVEQLKA KEQTDMEVNLLHDSLNNIRTATSRLDIA+A LHDLSLRPQGKKMLVPLTASLYVPGTLD+ADKV VDVG
Subjt:  MASRKGSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG

Query:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT
        TGYFIEKTMAEGKDYCD KIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT
Subjt:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT

XP_023549859.1 probable prefoldin subunit 5 [Cucurbita pepo subsp. pepo]4.3e-7295.6Show/hide
Query:  MASRKGSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG
        MASRKG SAGEG RS  LELEKMSVEQLKA KEQTDMEVNLLHDSLNNIRTATSRLDIA+AALHDLSLRPQGKKMLVPLTASLYVPGTLD+ADKVLVDVG
Subjt:  MASRKGSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG

Query:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT
        TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT
Subjt:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT

XP_038875894.1 probable prefoldin subunit 5 isoform X1 [Benincasa hispida]3.5e-7497.47Show/hide
Query:  MASRKGSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG
        MASRKG SAGEG RSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIAS ALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG
Subjt:  MASRKGSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG

Query:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAAT
        TGYFIEKTMAEGKDYCDRKIKLL+SNFDQLIEIATKKKKVADEAGVILQAKLKQMAAT
Subjt:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAAT

TrEMBL top hitse value%identityAlignment
A0A0A0KMS5 Uncharacterized protein6.7e-7193.08Show/hide
Query:  MASRK-GSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDV
        MASRK GSS GEG RSLELELEKMSVEQL+A KEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGK+MLVPLTASLYVPGTLDEADKVLVDV
Subjt:  MASRK-GSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDV

Query:  GTGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAAT
        GTGYFIEKTMA+GKDYC+RKIKLLRSNFDQLIEIATKKKKVADEAG+ILQAKL+QM AT
Subjt:  GTGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAAT

A0A6J1FD74 probable prefoldin subunit 51.0e-7194.97Show/hide
Query:  MASRKGSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG
        MASRKG SAGEG RS  LELEKMSVEQLKA KEQ DMEVNLLHDSLNNIRTATSRLDIA+AALHDLSLRPQGKKMLVPLTASLYVPGTLD+ADKVLVDVG
Subjt:  MASRKGSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG

Query:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT
        TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT
Subjt:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT

A0A6J1H3F5 probable prefoldin subunit 53.3e-7092.45Show/hide
Query:  MASRKGSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG
        MASRKG SAGEG RS  LELEKMSVEQLKA+KEQTDMEVNLLHDSLNNIRTATSRLD ASAALHDLSLRPQGKKMLVPLTASLYVPGTLD+ADKVLVDVG
Subjt:  MASRKGSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG

Query:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT
        TGYFIEKTMAEGKDYCDRKIKLL+SNFDQLIE+A KKK +ADEAGVILQAKLKQMAATT
Subjt:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT

A0A6J1JP08 probable prefoldin subunit 53.3e-7092.45Show/hide
Query:  MASRKGSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG
        MASRKG SAGEG RS  LELEKMSVEQLKA+KEQTDMEVNLLHDSLNNIRTATSRLD ASAALHDLSLRPQGKKMLVPLTASLYVPGTLD+ADKVLVDVG
Subjt:  MASRKGSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG

Query:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT
        TGYFIEKTMAEGKDYCDRKIKLL+SNFDQLIE+A KKK +ADEAGVILQAKLKQMAATT
Subjt:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT

A0A6J1JVI6 probable prefoldin subunit 51.9e-7093.71Show/hide
Query:  MASRKGSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG
        MASRKG SAGEG RS  LELEKMSVEQLKA KEQTDMEVNLLHDSLNNIRTATSRLDIA+A LHDLSLRPQGKKMLVPLTASLYVPGTLD+ADKV VDVG
Subjt:  MASRKGSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG

Query:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT
        TGYFIEKTMAEGKDYCD KIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT
Subjt:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT

SwissProt top hitse value%identityAlignment
P57742 Probable prefoldin subunit 52.8e-5880.85Show/hide
Query:  ELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCDR
        E+EKM ++QLKALKEQ D+EVNLL DSLNNIRTAT RLD A+AAL+DLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVD+GTGYFIEKTM +GKDYC R
Subjt:  ELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCDR

Query:  KIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT
        KI LL+SNFDQL E+A KKK VADEAG++LQAK+KQ+ A T
Subjt:  KIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT

Q5RAY0 Prefoldin subunit 56.3e-1833.57Show/hide
Query:  LELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCD
        + + ++++ QL+ LK Q D EV  L  S+  ++   ++   A   L+ L+   +GK++LVPLT+S+YVPG L + + VL+DVGTGY++EKT  + KD+  
Subjt:  LELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCD

Query:  RKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAA
        RKI  L    +++     +K  +      ++  K++Q+ A
Subjt:  RKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAA

Q8HYI9 Prefoldin subunit 52.4e-1733.33Show/hide
Query:  LELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCD
        + + ++++ QL+ LK Q D EV  L  S+  ++   ++   A   L+ L    +GK++LVPLT+S+YVPG L + + VL+DVGTGY++EKT  + KD+  
Subjt:  LELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCD

Query:  RKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQM
        RKI  L    +++     +K  +      ++  K++Q+
Subjt:  RKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQM

Q99471 Prefoldin subunit 58.3e-1833.57Show/hide
Query:  LELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCD
        + + ++++ QL+ LK Q D EV  L  S+  ++   ++   A   L+ L+   +GK++LVPLT+S+YVPG L + + VL+DVGTGY++EKT  + KD+  
Subjt:  LELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCD

Query:  RKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAA
        RKI  L    +++     +K  +      ++  K++Q+ A
Subjt:  RKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAA

Q9WU28 Prefoldin subunit 58.3e-1833.57Show/hide
Query:  LELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCD
        + + ++++ QL+ LK Q D EV  L  S+  ++   ++   A   L+ L+   +GK++LVPLT+S+YVPG L + + VL+DVGTGY++EKT  + KD+  
Subjt:  LELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCD

Query:  RKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAA
        RKI  L    +++     +K  +      ++  K++Q+ A
Subjt:  RKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAA

Arabidopsis top hitse value%identityAlignment
AT5G23290.1 prefoldin 52.0e-5980.85Show/hide
Query:  ELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCDR
        E+EKM ++QLKALKEQ D+EVNLL DSLNNIRTAT RLD A+AAL+DLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVD+GTGYFIEKTM +GKDYC R
Subjt:  ELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCDR

Query:  KIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT
        KI LL+SNFDQL E+A KKK VADEAG++LQAK+KQ+ A T
Subjt:  KIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGAGAAAAGGAAGCAGCGCCGGTGAAGGGGCGAGATCGTTGGAGTTGGAGTTGGAGAAGATGAGTGTCGAGCAACTCAAAGCTCTCAAGGAACAGACTGATAT
GGAAGTCAATCTCCTTCACGACAGCCTTAACAACATTCGCACAGCCACTTCTCGCCTTGACATTGCCTCCGCTGCCCTACACGATCTCTCGCTCCGTCCTCAAGGAAAGA
AGATGTTGGTGCCTCTTACTGCGTCGCTTTATGTTCCTGGGACGCTTGATGAGGCCGATAAGGTCTTGGTGGATGTAGGCACTGGATACTTCATTGAGAAAACAATGGCT
GAAGGAAAAGATTACTGTGATCGAAAGATCAAATTGCTGAGGTCGAATTTTGACCAACTAATCGAGATTGCTACTAAAAAGAAGAAAGTAGCAGATGAAGCTGGGGTGAT
CTTACAAGCAAAACTGAAGCAGATGGCTGCCACAACATAG
mRNA sequenceShow/hide mRNA sequence
CTCGTCTTTAAACCCGAGGAACCGAACCAAAAGAAAGGTCAAGAAGAAAGAAATCTCGTATGGGACTCGCAGATTGTAGAGAGTTCTGAGATTGAGGAAAGTGATTCCAA
ACGCGAGTGGAAACAATGGCGTCGAGAAAAGGAAGCAGCGCCGGTGAAGGGGCGAGATCGTTGGAGTTGGAGTTGGAGAAGATGAGTGTCGAGCAACTCAAAGCTCTCAA
GGAACAGACTGATATGGAAGTCAATCTCCTTCACGACAGCCTTAACAACATTCGCACAGCCACTTCTCGCCTTGACATTGCCTCCGCTGCCCTACACGATCTCTCGCTCC
GTCCTCAAGGAAAGAAGATGTTGGTGCCTCTTACTGCGTCGCTTTATGTTCCTGGGACGCTTGATGAGGCCGATAAGGTCTTGGTGGATGTAGGCACTGGATACTTCATT
GAGAAAACAATGGCTGAAGGAAAAGATTACTGTGATCGAAAGATCAAATTGCTGAGGTCGAATTTTGACCAACTAATCGAGATTGCTACTAAAAAGAAGAAAGTAGCAGA
TGAAGCTGGGGTGATCTTACAAGCAAAACTGAAGCAGATGGCTGCCACAACATAGGAAGATGTGTGACCATGTAATATGTAAGGCATTGATTGGTTAGTTAAACACAAGC
CTTGAAGAATTTCAGAATACCAAAACTTTTATAGGGTAGAGATATGCGGGTTGAAATAAGAGGGTCGGGTTCAGGTCGTATTTGAGGTGTCGGTAAAACTGTAAACTTCT
TCCAAGTACTCAGTGGATAGTTAGAACTAGAATTTCCATTTCTCTTCTATGTGGTAAATGGTGACTTGGTGAGGAGAGGAAGATCTATAAGGCCACTAGAACATGTTGAA
AGAAGATTTAATGACTCATCTTTTTTCAATCCATGATATGAATGTTGTATTTTTAGTTAGCCTGTCTGCCACTTGAATTTGTTTATGAAGAAATTTTGCCCCATCAATTT
CATATGTAGAGTTTTTTTTTTCTTTTTTCTTTTTGGTCGTTTCGTCATCGTCCA
Protein sequenceShow/hide protein sequence
MASRKGSSAGEGARSLELELEKMSVEQLKALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMA
EGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQMAATT