; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G009660 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G009660
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionWRKY domain-containing protein
Genome locationCicolChr01:11618496..11624985
RNA-Seq ExpressionCcUC01G009660
SyntenyCcUC01G009660
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR003657 - WRKY domain
IPR036576 - WRKY domain superfamily
IPR044810 - WRKY transcription factor, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13362.1 putative WRKY transcription factor 35 [Cucumis melo var. makuwa]3.3e-2268.87Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQ--SKNNNITTTTTSTTPPT--PISSKLSQDHHHKNK-------EDKEHQ
        CSSSKGCSARKQVE+SRTDPNMLVITYTSE+NH PW TQRNAL GSSRS Q  SKNN  TTTTT+TT  T  P SSKL    HHKNK       ED++H+
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQ--SKNNNITTTTTSTTPPT--PISSKLSQDHHHKNK-------EDKEHQ

Query:  DQNNRT
        + NN T
Subjt:  DQNNRT

XP_004134891.2 probable WRKY transcription factor 35 [Cucumis sativus]2.8e-2167.65Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSR-SQQSKNNNITTTTTSTTPPTPISSKLSQDHHHKNK----EDKEHQDQNNRT
        CSSSKGCSARKQVE+SRTDPNMLVITYTSE+NH PW TQRNAL GSSR SQQS  NN +T TT++T   P SSKL    HHKNK    E++E QD  N  
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSR-SQQSKNNNITTTTTSTTPPTPISSKLSQDHHHKNK----EDKEHQDQNNRT

Query:  LG
         G
Subjt:  LG

XP_008439520.1 PREDICTED: probable WRKY transcription factor 35 [Cucumis melo]1.5e-2268.27Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQ--SKNNNITTTTTSTTPPTPISSKLSQDHHHKNK-------EDKEHQDQ
        CSSSKGCSARKQVE+SRTDPNMLVITYTSE+NH PW TQRNAL GSSRS Q  SKNN  TTTTT++T   P SSKL    HHKNK       ED++H++ 
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQ--SKNNNITTTTTSTTPPTPISSKLSQDHHHKNK-------EDKEHQDQ

Query:  NNRT
        NN T
Subjt:  NNRT

XP_010504968.1 PREDICTED: probable WRKY transcription factor 35 [Camelina sativa]2.2e-1861.36Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTTTTSTTPPTPISSKLSQDHHHKNKEDKEH
        CSSSKGCSARKQVE+SRTDPNMLVITYTSE+NH PW TQRNAL GS+RS  S ++N+++  ++ T  T  SS+ SQ++++K++ +K H
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTTTTSTTPPTPISSKLSQDHHHKNKEDKEH

XP_038881354.1 probable WRKY transcription factor 35 [Benincasa hispida]1.2e-2474.49Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTTTTSTTP-PTPISSKLSQDHHHKNKED----KEHQDQNN
        CSSSKGCSARKQVE+SRTDPNMLVITYTSE+NH PW TQRNAL GSSRSQQSKNNN T+ TT+TTP  + +SS  +QD HHKNKE+    +E QDQNN
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTTTTSTTP-PTPISSKLSQDHHHKNKED----KEHQDQNN

TrEMBL top hitse value%identityAlignment
A0A0A0KKY7 WRKY domain-containing protein1.4e-2167.65Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSR-SQQSKNNNITTTTTSTTPPTPISSKLSQDHHHKNK----EDKEHQDQNNRT
        CSSSKGCSARKQVE+SRTDPNMLVITYTSE+NH PW TQRNAL GSSR SQQS  NN +T TT++T   P SSKL    HHKNK    E++E QD  N  
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSR-SQQSKNNNITTTTTSTTPPTPISSKLSQDHHHKNK----EDKEHQDQNNRT

Query:  LG
         G
Subjt:  LG

A0A1S3AZL1 probable WRKY transcription factor 357.3e-2368.27Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQ--SKNNNITTTTTSTTPPTPISSKLSQDHHHKNK-------EDKEHQDQ
        CSSSKGCSARKQVE+SRTDPNMLVITYTSE+NH PW TQRNAL GSSRS Q  SKNN  TTTTT++T   P SSKL    HHKNK       ED++H++ 
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQ--SKNNNITTTTTSTTPPTPISSKLSQDHHHKNK-------EDKEHQDQ

Query:  NNRT
        NN T
Subjt:  NNRT

A0A5D3CPQ3 Putative WRKY transcription factor 351.6e-2268.87Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQ--SKNNNITTTTTSTTPPT--PISSKLSQDHHHKNK-------EDKEHQ
        CSSSKGCSARKQVE+SRTDPNMLVITYTSE+NH PW TQRNAL GSSRS Q  SKNN  TTTTT+TT  T  P SSKL    HHKNK       ED++H+
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQ--SKNNNITTTTTSTTPPT--PISSKLSQDHHHKNK-------EDKEHQ

Query:  DQNNRT
        + NN T
Subjt:  DQNNRT

A0A7J7C542 WRKY transcription factor 35 family protein1.2e-1761.05Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTTTTSTTPPTPISSKLSQDHHHKNKEDKEHQDQNNRT
        CSSSKGCSARKQVE+SRT+PNMLVITYTSE+NH PW TQRNAL GS+RSQ  K N    TTTSTT  +  SS  S  H  + KE+++    N+ +
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTTTTSTTPPTPISSKLSQDHHHKNKEDKEHQDQNNRT

R0HCF3 WRKY domain-containing protein3.2e-1861.8Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITT-TTTSTTPPTPISSKLSQDHHHKNKEDKEH
        CSSSKGCSARKQVE+SRTDPNMLVITYTSE+NH PW TQRNAL GS+RS  S ++N++T ++T+    T  SS++SQ++++K++ +K H
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITT-TTTSTTPPTPISSKLSQDHHHKNKEDKEH

SwissProt top hitse value%identityAlignment
O04609 WRKY transcription factor 224.7e-1150Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQS--KNNNITTTTTSTTPPTPISS
        CS+SKGC ARKQVE++R+DP M ++TYT+E+NH P  T RN+L GS+R + S  + +   TTT +T   +P++S
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQS--KNNNITTTTTSTTPPTPISS

O64747 Probable WRKY transcription factor 352.0e-1756.82Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTTTTSTTPPTPISSKLSQDHHHKNKEDKEH
        CSSSKGCSARKQVE+SRTDPNMLVITYTSE+NH PW TQRNAL GS+RS  S + N ++ +++    T  SS++ Q++  K++ +  +
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTTTTSTTPPTPISSKLSQDHHHKNKEDKEH

Q9FL92 Disease resistance protein RRS1B1.7e-1354.55Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTTTTSTTPPTPISSKLSQDHHHKNKEDKEH
        C+SSKGC ARKQVE+SRTDPN+ VITY SE+NH P+ T RN L GS+RS  SK +++TT+ +ST         +SQD   K   DK H
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTTTTSTTPPTPISSKLSQDHHHKNKEDKEH

Q9FLX8 Probable WRKY transcription factor 278.9e-1045.57Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTTTTSTTPPTPISSKLSQDHH
        CSSSKGC ARKQVE+S  DPN+ ++TYT E+ H P  T RN+L GS+R++    N +    TS     P+S  + ++ H
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTTTTSTTPPTPISSKLSQDHH

Q9SA80 Probable WRKY transcription factor 141.8e-1546.55Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTT--------------------TTSTTPPTPISSKLSQDHHH
        CSSSKGCSARKQVE+SRTDPNMLVITYTSE+NH PW  QRNAL GS+RS  S ++N   +                     +STTPP  +SS   +D   
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTT--------------------TTSTTPPTPISSKLSQDHHH

Query:  KNKEDKEHQDQNNRTL
         + E +   D ++  +
Subjt:  KNKEDKEHQDQNNRTL

Arabidopsis top hitse value%identityAlignment
AT1G30650.1 WRKY DNA-binding protein 141.3e-1646.55Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTT--------------------TTSTTPPTPISSKLSQDHHH
        CSSSKGCSARKQVE+SRTDPNMLVITYTSE+NH PW  QRNAL GS+RS  S ++N   +                     +STTPP  +SS   +D   
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTT--------------------TTSTTPPTPISSKLSQDHHH

Query:  KNKEDKEHQDQNNRTL
         + E +   D ++  +
Subjt:  KNKEDKEHQDQNNRTL

AT2G34830.1 WRKY DNA-binding protein 351.4e-1856.82Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTTTTSTTPPTPISSKLSQDHHHKNKEDKEH
        CSSSKGCSARKQVE+SRTDPNMLVITYTSE+NH PW TQRNAL GS+RS  S + N ++ +++    T  SS++ Q++  K++ +  +
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTTTTSTTPPTPISSKLSQDHHHKNKEDKEH

AT4G01250.1 WRKY family transcription factor3.3e-1250Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQS--KNNNITTTTTSTTPPTPISS
        CS+SKGC ARKQVE++R+DP M ++TYT+E+NH P  T RN+L GS+R + S  + +   TTT +T   +P++S
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQS--KNNNITTTTTSTTPPTPISS

AT5G45050.1 Disease resistance protein (TIR-NBS-LRR class)1.2e-1454.55Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTTTTSTTPPTPISSKLSQDHHHKNKEDKEH
        C+SSKGC ARKQVE+SRTDPN+ VITY SE+NH P+ T RN L GS+RS  SK +++TT+ +ST         +SQD   K   DK H
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTTTTSTTPPTPISSKLSQDHHHKNKEDKEH

AT5G45050.2 Disease resistance protein (TIR-NBS-LRR class)1.2e-1454.55Show/hide
Query:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTTTTSTTPPTPISSKLSQDHHHKNKEDKEH
        C+SSKGC ARKQVE+SRTDPN+ VITY SE+NH P+ T RN L GS+RS  SK +++TT+ +ST         +SQD   K   DK H
Subjt:  CSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTTTTSTTPPTPISSKLSQDHHHKNKEDKEH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATGCAGCAGCTCAAAGGGATGTTCAGCAAGAAAACAAGTGGAGAAAAGTAGAACAGATCCAAACATGCTGGTGATTACTTACACATCTGAGTATAACCATCGTCC
ATGGGAAACTCAAAGAAATGCTCTTGTTGGTTCTTCAAGGTCCCAACAATCCAAAAACAACAATATTACTACTACTACTACTTCAACAACACCACCAACACCCATTTCTT
CAAAACTCTCTCAAGATCATCATCACAAAAATAAGGAAGATAAAGAACATCAAGATCAAAACAATAGAACATTAGGGTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTATGCAGCAGCTCAAAGGGATGTTCAGCAAGAAAACAAGTGGAGAAAAGTAGAACAGATCCAAACATGCTGGTGATTACTTACACATCTGAGTATAACCATCGTCC
ATGGGAAACTCAAAGAAATGCTCTTGTTGGTTCTTCAAGGTCCCAACAATCCAAAAACAACAATATTACTACTACTACTACTTCAACAACACCACCAACACCCATTTCTT
CAAAACTCTCTCAAGATCATCATCACAAAAATAAGGAAGATAAAGAACATCAAGATCAAAACAATAGAACATTAGGGTTCTAG
Protein sequenceShow/hide protein sequence
MLCSSSKGCSARKQVEKSRTDPNMLVITYTSEYNHRPWETQRNALVGSSRSQQSKNNNITTTTTSTTPPTPISSKLSQDHHHKNKEDKEHQDQNNRTLGF