; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G009680 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G009680
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionnon-specific lipid-transfer protein 2-like
Genome locationCicolChr01:11635580..11635855
RNA-Seq ExpressionCcUC01G009680
SyntenyCcUC01G009680
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU46076.1 hypothetical protein TSUD_180120 [Trifolium subterraneum]4.4e-1343.96Show/hide
Query:  MKGMCLLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC
        MK +C ++L++ ++V    +VEAV C   ELRP L A T +  PS+ CCN +KE   C CGY KN  + PY+     K + S CGV TP+C
Subjt:  MKGMCLLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC

KAE8648143.1 hypothetical protein Csa_023893, partial [Cucumis sativus]8.6e-1749.4Show/hide
Query:  LVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC
        ++++V V + QL  A  C+  E+R  ++AYT S  PSS+CC+MV++HR CYC Y+KN   Q YLQ   TK II+QCG+T P C
Subjt:  LVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC

KAE8648147.1 hypothetical protein Csa_023900, partial [Cucumis sativus]9.5e-1654.79Show/hide
Query:  QLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC
        QL  A  C+  E+R  ++AYT S  PSS+CC+MV++HR CYC Y+KN   Q YLQ   TK IISQCG+T P C
Subjt:  QLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC

KGN66906.1 hypothetical protein Csa_006987 [Cucumis sativus]1.6e-1854.95Show/hide
Query:  MKGMCLLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC
        M+G+ LLV    V++N+TQ+ +AVKC+  ELRP   ++TMS+EPSS CC  V +HR CYC Y KN K QPYL+  AT+ IIS CGV  P C
Subjt:  MKGMCLLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC

XP_038904866.1 non-specific lipid-transfer protein 2-like [Benincasa hispida]4.4e-1344.19Show/hide
Query:  LLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC
        LLV+ M+ L+   +L EAV C   EL P + A+T +  PS+ CC+ +KE + C+CGY KN K+  Y++    K +IS CGV+ PKC
Subjt:  LLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC

TrEMBL top hitse value%identityAlignment
A0A0A0M3W7 AAI domain-containing protein7.6e-1954.95Show/hide
Query:  MKGMCLLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC
        M+G+ LLV    V++N+TQ+ +AVKC+  ELRP   ++TMS+EPSS CC  V +HR CYC Y KN K QPYL+  AT+ IIS CGV  P C
Subjt:  MKGMCLLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC

A0A2Z6NR57 AAI domain-containing protein2.1e-1343.96Show/hide
Query:  MKGMCLLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC
        MK +C ++L++ ++V    +VEAV C   ELRP L A T +  PS+ CCN +KE   C CGY KN  + PY+     K + S CGV TP+C
Subjt:  MKGMCLLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC

A0A6P6A4M9 non-specific lipid-transfer protein 2-like4.0e-1241.38Show/hide
Query:  CLLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC
        C + LV+ +   +T+  EAV C+A +L P L A T S  PS+TCC+ +KE + C+CGY KN  ++ ++    +K + S CGV  PKC
Subjt:  CLLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC

A0A6P6A579 non-specific lipid-transfer protein 2-like4.0e-1242.53Show/hide
Query:  CLLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC
        C   LV+ +   +T+ VEAV C+  +L P L A T S  PS+TCC+ +KE + C+CGY KN  I+ ++    +K + S CGV  PKC
Subjt:  CLLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC

I1N5L5 AAI domain-containing protein9.0e-1241.57Show/hide
Query:  GMCLLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC
        G  ++V+    LV  + + EAV C   EL P L A T S  PS+TCC  V+E R C CGY KN  ++PY+    ++ + S CGV  P C
Subjt:  GMCLLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC

SwissProt top hitse value%identityAlignment
P82353 Non-specific lipid-transfer protein 23.8e-0733.82Show/hide
Query:  VKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC
        V C   +L P L          +TCC  ++E R C CGY KN  ++ Y+     + + S CGV  P+C
Subjt:  VKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC

Q43681 Probable non-specific lipid-transfer protein AKCS93.3e-1137.36Show/hide
Query:  MKGMCLLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC
        M  +C +V+V   L++   + EAV C   EL   + A T   +PSSTCC+ +K    C C Y KN  ++ Y+     K ++S CGVT P C
Subjt:  MKGMCLLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC

Arabidopsis top hitse value%identityAlignment
AT1G07747.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein8.6e-0733.33Show/hide
Query:  LVLVMSVLVNQ--TQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC
        LV V  VL +   T+  E   C   +L+  L        PS+ CC  +K+ + C+C Y KN  I PY+   + K ++  CGV  P C
Subjt:  LVLVMSVLVNQ--TQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC

AT1G43667.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein5.0e-0733.82Show/hide
Query:  VKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC
        V C   EL+P L +     +PS+ CC  +KE   C+C Y +N +   Y+   A K I++ C +  P C
Subjt:  VKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC

AT3G57310.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.8e-0528.41Show/hide
Query:  MCLLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC
        M  L    + +V    + E   C    L   L A     +P + CC M+KE + C CGY K+     Y+       +++ CG+  PKC
Subjt:  MCLLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.5e-0632.35Show/hide
Query:  VKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC
        V C+A +L          V PS+ CC  +KE + C+C Y K+ +   Y+     K  ++ CGV  P C
Subjt:  VKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGCATGTGCCTTTTGGTTCTCGTGATGAGTGTGCTTGTGAATCAAACTCAACTGGTGGAAGCAGTGAAATGCGAAGCAAAAGAACTGAGGCCATTTCTTTTTGC
ATACACAATGTCGGTAGAGCCATCGTCAACTTGTTGCAACATGGTGAAGGAGCACAGACAATGCTACTGTGGGTATCAGAAGAATCAAAAGATTCAACCTTATTTACAAG
AGCATGCGACCAAAATAATTATTTCTCAATGTGGAGTTACCACCCCCAAATGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGCATGTGCCTTTTGGTTCTCGTGATGAGTGTGCTTGTGAATCAAACTCAACTGGTGGAAGCAGTGAAATGCGAAGCAAAAGAACTGAGGCCATTTCTTTTTGC
ATACACAATGTCGGTAGAGCCATCGTCAACTTGTTGCAACATGGTGAAGGAGCACAGACAATGCTACTGTGGGTATCAGAAGAATCAAAAGATTCAACCTTATTTACAAG
AGCATGCGACCAAAATAATTATTTCTCAATGTGGAGTTACCACCCCCAAATGCTAA
Protein sequenceShow/hide protein sequence
MKGMCLLVLVMSVLVNQTQLVEAVKCEAKELRPFLFAYTMSVEPSSTCCNMVKEHRQCYCGYQKNQKIQPYLQEHATKIIISQCGVTTPKC