CuGenDBv2

Gene ID	CcUC01G010400
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Ribosomal protein S14
Genome location	CicolChr01:14675017..14678607
RNA-Seq Expression	CcUC01G010400
Synteny	CcUC01G010400
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001209 - Ribosomal protein S14

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7032953.1 Ribosomal protein S14, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]

9.9e-14

55.29

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Query:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD
        +EDKRNILD+Y +QLAAKFE K KL+KA+CND SLPND        L+                FT RPR VYQLF VS IVFRD
Subjt:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD

XP_022134507.1 uncharacterized protein LOC111006733 [Momordica charantia]

2.6e-14

57.65

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Query:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD
        S DKRNILD+Y +QLAAKFE K KLYKA+CND SLPND        L+                FT RPRAVYQLF VS IVFRD
Subjt:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD

XP_022938933.1 uncharacterized protein LOC111444996 [Cucurbita moschata]

3.4e-14

56.47

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Query:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD
        +EDKRNILD+Y +QLAAKFE K KLYKA+CND SLPND        L+                FT RPR VYQLF VS IVFRD
Subjt:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD

XP_023550870.1 uncharacterized protein LOC111808878 [Cucurbita pepo subsp. pepo]

3.4e-14

56.47

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Query:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD
        +EDKRNILD+Y +QLAAKFE K KLYKA+CND SLPND        L+                FT RPR VYQLF VS IVFRD
Subjt:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD

XP_038884392.1 ribosomal protein S14, mitochondrial [Benincasa hispida]

5.3e-15

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Query:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD
        SEDKRNILD+Y +QLAAKFE K KLYKAICND SLPND        L+                FT RPRAVYQLF VS IVFRD
Subjt:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LSR8 Uncharacterized protein

1.5e-12

52.94

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Query:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD
        S DKRNILDNY +QLAAKFE K  L+KAICND SLP D        L+                FT RPR VYQLF +S IVFR+
Subjt:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD

A0A1S4E169 ribosomal protein S14, mitochondrial

4.5e-12

52.94

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Query:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD
        S DKRNILDNY +QLAAKFE K  L+KAICND SLP D        L+                FT RPR VYQLF +S IVFR+
Subjt:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD

A0A5D3CKB3 Ribosomal protein S14

4.5e-12

52.94

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Query:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD
        S DKRNILDNY +QLAAKFE K  L+KAICND SLP D        L+                FT RPR VYQLF +S IVFR+
Subjt:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD

A0A6J1C264 uncharacterized protein LOC111006733

1.3e-14

57.65

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Query:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD
        S DKRNILD+Y +QLAAKFE K KLYKA+CND SLPND        L+                FT RPRAVYQLF VS IVFRD
Subjt:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD

A0A6J1FKA4 uncharacterized protein LOC111444996

1.7e-14

56.47

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Query:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD
        +EDKRNILD+Y +QLAAKFE K KLYKA+CND SLPND        L+                FT RPR VYQLF VS IVFRD
Subjt:  SEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD

SwissProt top hits

e value

%identity

Alignment

P05716 Ribosomal protein S14, mitochondrial

1.0e-08

41.46

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Query:  DKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFR
        +KRNI D+  + LAAK+E + KLYKA C D  LP+D        L+                 T RPR+VY+LF +S IVFR
Subjt:  DKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFR

P14875 Ribosomal protein S14, mitochondrial

2.2e-08

40.24

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Query:  DKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFR
        +KRNI D+  + LA K+E + KLYKA CND +LP+D        L+                 T RPR+VY+ F +S IVFR
Subjt:  DKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFR

P26873 Ribosomal protein S14, mitochondrial

2.1e-06

39.24

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Query:  ILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD
        I D+  + L AK+E K   YKAIC D +LPN   +     L+                FT RPR+VY+LF +S IVFR+
Subjt:  ILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFRD

P49387 Ribosomal protein S14, mitochondrial

1.8e-05

36.59

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Query:  DKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFR
        +K+N  D+  + LAAKFE + KLYKA C D  LP+D        L+                 T RPR+V + F +  IVFR
Subjt:  DKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFR

Arabidopsis top hits

e value

%identity

Alignment

AT2G34520.1 mitochondrial ribosomal protein S14

1.1e-07

39.51

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Query:  KRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFR
        KRN  D+  + LAA+FE + KLYKA C D  LP++        L+                FT R R+V +LF VS IVFR
Subjt:  KRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLN----------------FTDRPRAVYQLFNVSCIVFR

Sequences

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CDS sequence

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ATGCCATTGAACGAATCGGAGGACAAGCGAAACATTCTTGACAATTATCACCAACAGCTTGCTGCGAAGTTTGAGTTTAAGTGGAAGCTTTACAAAGCCATTTGCAACGA
TCTGAGTCTTCCCAACGATTTTGTTCACTCGACTGAGGAATCACTGAATTTCACCGATCGACCTAGGGCTGTCTACCAGCTTTTCAATGTTTCTTGTATTGTTTTCCGTG
ATTGGCATCCAAAG

mRNA sequence

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Protein sequence

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MPLNESEDKRNILDNYHQQLAAKFEFKWKLYKAICNDLSLPNDFVHSTEESLNFTDRPRAVYQLFNVSCIVFRDWHPK

CcUC01G010400 (gene) of Watermelon (PI 537277) v1 genome