; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G010480 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G010480
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionS-protein homolog
Genome locationCicolChr01:14886959..14887405
RNA-Seq ExpressionCcUC01G010480
SyntenyCcUC01G010480
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646231.1 hypothetical protein Csa_023825, partial [Cucumis sativus]1.9e-5077.59Show/hide
Query:  LAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIYL
        L KW IHVVN LSNGQILL HC+SKDNDLGE +L  G+EFNWRF+VNFWNTTLFWCYLQKPNG HSSF++FWIES SVWLY MC++ NCIW AKDDGIYL
Subjt:  LAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIYL

Query:  RDN-TNQKDVLIHKWE
        +DN    KD+LIHKWE
Subjt:  RDN-TNQKDVLIHKWE

XP_022143772.1 S-protein homolog 74-like [Momordica charantia]2.3e-5163.76Show/hide
Query:  MTKQMETRCMKKQCVVLLLLLCLAVLEETKA-AELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHS
        M++ M  R  KK  +V LL+L L +LE  +A +EL KWQIHVVN LSNGQ L VHC+SKDNDLGEH L+ G+EFNW F+VN WNTTLFWCYL KP+G  +
Subjt:  MTKQMETRCMKKQCVVLLLLLCLAVLEETKA-AELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHS

Query:  SFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE
        SFD FW+E  S+WL+  CY SNCIW AKDDGIYLRDN  Q+D+L+H+W+
Subjt:  SFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE

XP_031745090.1 S-protein homolog 1-like [Cucumis sativus]5.8e-6376.51Show/hide
Query:  MTKQMETRCMKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSS
        M KQ+E   MKKQCVVLL +LCLA+LEETKA EL KW IHVVN LSNGQILL HC+SKDNDLGE +L  G+EFNWRF+VNFWNTTLFWCYLQKPNG HSS
Subjt:  MTKQMETRCMKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSS

Query:  FDAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDN-TNQKDVLIHKWE
        F++FWIES SVWLY MC++ NCIW AKDDGIYL+DN    KD+LIHKWE
Subjt:  FDAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDN-TNQKDVLIHKWE

XP_038896421.1 S-protein homolog 1-like [Benincasa hispida]1.6e-5270.95Show/hide
Query:  MTKQMETRCMKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSS
        M KQME    KKQCVVLL  L L + EETKAAELAKWQIHVVN LS+GQIL VHC+SKD+DLGEHKLSVG+EFNW F+              KPN  HSS
Subjt:  MTKQMETRCMKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSS

Query:  FDAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE
        F+AFWIES SVWLY+MCYDSNCIW AKDDGIYL+DNT Q+D+LIHKWE
Subjt:  FDAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE

XP_038896594.1 S-protein homolog 1-like [Benincasa hispida]2.2e-7085.42Show/hide
Query:  METRCMKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAF
        ME RCM KQCVVL  +LCLA+L+E KAAELAKWQIHVVN LSNGQIL VHC+SKDNDLGEHKLSVG+EFNWRF+VNFWNTTLFWCYLQKPN  HSSF AF
Subjt:  METRCMKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAF

Query:  WIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE
        WIESTSVWLY+MCYDSNCIWIAKDDG+YL+DNTN +DVLIHKWE
Subjt:  WIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE

TrEMBL top hitse value%identityAlignment
A0A1S4E390 S-protein homolog2.6e-4558Show/hide
Query:  MTKQMET-RCMKKQCVV--LLLLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGL
        ++ ++ET R MK   +V   L +L LA+++ TKA  L +W IH+VN LSN Q L VHC+SKD+DLG+  LSVG+EFNW FK+NFW+TTLFWCYLQKPN  
Subjt:  MTKQMET-RCMKKQCVV--LLLLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGL

Query:  HSSFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
          SF+AFW+E  S+WL+  C+ SNCIW AKDDGIYL+DN   +D L+H W
Subjt:  HSSFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

A0A6J1CPR8 S-protein homolog5.7e-4863.24Show/hide
Query:  KQCVVLLLLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSV
        K  +V L +  LA++E+ +A  L+KWQIHV N LSN Q+L VHC+SK++DLGEH LSVG+EFNWRF+VN W+TTL+WCYLQKPNG   SFDAFW+E  S+
Subjt:  KQCVVLLLLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSV

Query:  WLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
        WLY  C +SNC W AKDDGIYLR+N + +DV +HKW
Subjt:  WLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

A0A6J1CQH6 S-protein homolog5.3e-4658.33Show/hide
Query:  METRCMKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAF
        M  R +KK  +V+LL L LA++E   + EL +W IHVVN L NG++L VHC+S+D+DLGE  L  G+EF+W F+VN  +TTLFWC+L+KP+    SFDAF
Subjt:  METRCMKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAF

Query:  WIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE
        W+E TS+WL+  CYD+NCIW AKDDG+YLRDN  Q+DVL+HKW+
Subjt:  WIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE

A0A6J1CRU0 S-protein homolog1.1e-5163.76Show/hide
Query:  MTKQMETRCMKKQCVVLLLLLCLAVLEETKA-AELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHS
        M++ M  R  KK  +V LL+L L +LE  +A +EL KWQIHVVN LSNGQ L VHC+SKDNDLGEH L+ G+EFNW F+VN WNTTLFWCYL KP+G  +
Subjt:  MTKQMETRCMKKQCVVLLLLLCLAVLEETKA-AELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHS

Query:  SFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE
        SFD FW+E  S+WL+  CY SNCIW AKDDGIYLRDN  Q+D+L+H+W+
Subjt:  SFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE

A0A6J1HAC3 S-protein homolog2.4e-3851.03Show/hide
Query:  QMETRCMKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDA
        +M    +K Q +V L+   LA+     +   +KW+IH+ N LSNGQ + VHC+SKDNDLGEH L+ G+EF W FKVNFW+TTLFWCYL+KPNG   +FDA
Subjt:  QMETRCMKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDA

Query:  FWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE
        FW+E  + WL   C  + C W A+D+GIYL+DN+   D  +H W+
Subjt:  FWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 61.1e-1132.33Show/hide
Query:  VVLLLLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSVWLY
        V++ L+ C  +  + K   +      VV    N  +L VHC+S+D+D G H L  G  + W F VNF N+TL++C   +       FD +        + 
Subjt:  VVLLLLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSVWLY

Query:  DMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
        D     NC W AK+DGIY      +K+ L +KW
Subjt:  DMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

F4JLS0 S-protein homolog 13.8e-2543.97Show/hide
Query:  ELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIY
        ++++WQ+ VVN L+ G+ L +HC+SK++DLGE  L   + F+W F  N  ++T FWCY+ K NG H + + FW     V L+  C   NCIW AK DG+Y
Subjt:  ELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIY

Query:  LRDNTNQKDVLIHKWE
        L ++ + +DVL  KWE
Subjt:  LRDNTNQKDVLIHKWE

P0DN92 S-protein homolog 241.8e-1130.6Show/hide
Query:  VVLLLLLCLAVLEETKAAELAKWQI-HVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSVWL
        +V++ L+C   L+  +A E  +  +  V  +  N  +L +HC+S+D+DLG H L+ G  F W+F VNF  +TL++C   +       F+ +         
Subjt:  VVLLLLLCLAVLEETKAAELAKWQI-HVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSVWL

Query:  YDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
         D    +NC W A+ DGIY       K  L + W
Subjt:  YDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

Q2HQ46 S-protein homolog 742.1e-2341.38Show/hide
Query:  ELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIY
        ++++WQ+ V N L+ G+ L +HC+SK+NDLG+  L     F+W F  N  ++TLFWCY+ K +G H +   FW     V L+  C   NC+W AK+DG+Y
Subjt:  ELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIY

Query:  LRDNTNQKDVLIHKWE
        L ++   +DVL  KW+
Subjt:  LRDNTNQKDVLIHKWE

Q9LW22 S-protein homolog 213.1e-1137.5Show/hide
Query:  KWQIHVVNRLS--NGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIYL
        K  I V N L+  N  IL VHC+SK+ND+G   L +G   ++ FK NFW TT FWC L K             ++  ++  D    S+  W+A+DDGIY 
Subjt:  KWQIHVVNRLS--NGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIYL

Query:  RDNT
          ++
Subjt:  RDNT

Arabidopsis top hitse value%identityAlignment
AT3G26880.1 Plant self-incompatibility protein S1 family2.2e-1237.5Show/hide
Query:  KWQIHVVNRLS--NGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIYL
        K  I V N L+  N  IL VHC+SK+ND+G   L +G   ++ FK NFW TT FWC L K             ++  ++  D    S+  W+A+DDGIY 
Subjt:  KWQIHVVNRLS--NGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIYL

Query:  RDNT
          ++
Subjt:  RDNT

AT4G16295.1 S-protein homologue 12.7e-2643.97Show/hide
Query:  ELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIY
        ++++WQ+ VVN L+ G+ L +HC+SK++DLGE  L   + F+W F  N  ++T FWCY+ K NG H + + FW     V L+  C   NCIW AK DG+Y
Subjt:  ELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIY

Query:  LRDNTNQKDVLIHKWE
        L ++ + +DVL  KWE
Subjt:  LRDNTNQKDVLIHKWE

AT4G29035.1 Plant self-incompatibility protein S1 family1.5e-2441.38Show/hide
Query:  ELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIY
        ++++WQ+ V N L+ G+ L +HC+SK+NDLG+  L     F+W F  N  ++TLFWCY+ K +G H +   FW     V L+  C   NC+W AK+DG+Y
Subjt:  ELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIY

Query:  LRDNTNQKDVLIHKWE
        L ++   +DVL  KW+
Subjt:  LRDNTNQKDVLIHKWE

AT5G04347.1 Plant self-incompatibility protein S1 family1.7e-1245.74Show/hide
Query:  VVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQK-PN-GLHSSFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIY
        V N L+N ++L V CRSKD++LG+H L VG      F  N W  TLFWC L K P+  LH +FDA+     S W  D+      +WIA++DGIY
Subjt:  VVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQK-PN-GLHSSFDAFWIESTSVWLYDMCYDSNCIWIAKDDGIY

AT5G04350.1 Plant self-incompatibility protein S1 family5.3e-1436.44Show/hide
Query:  LLLLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYL-QKPNGLHS-SFDAFWIESTSVWLY
        +++ LC+ V       E+ + ++ + N+L + ++L VHCRSKD+DLGEH L +G ++ + F  N W TT F C + Q PN  H   F A+    TS   +
Subjt:  LLLLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYL-QKPNGLHS-SFDAFWIESTSVWLY

Query:  DMCYDSNCIWIAKDDGIY
            +++C WI ++DGIY
Subjt:  DMCYDSNCIWIAKDDGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAAGCAAATGGAAACGAGATGTATGAAAAAGCAGTGTGTGGTGTTGTTATTACTGTTGTGTTTGGCAGTACTTGAAGAAACCAAGGCTGCAGAGCTTGCAAAATG
GCAGATCCATGTTGTGAATCGGCTAAGCAATGGCCAAATCCTGTTGGTTCATTGCAGATCCAAAGACAATGATTTAGGAGAACACAAGCTTAGTGTTGGATCTGAATTCA
ATTGGAGATTTAAAGTAAACTTTTGGAATACGACACTATTTTGGTGTTACTTGCAGAAGCCAAATGGACTACATTCGTCATTCGATGCCTTTTGGATTGAGAGCACATCG
GTTTGGCTCTATGATATGTGCTACGATTCTAACTGCATTTGGATAGCGAAAGATGATGGAATTTATTTGAGAGACAACACTAATCAAAAAGATGTTTTGATTCATAAGTG
GGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAAGCAAATGGAAACGAGATGTATGAAAAAGCAGTGTGTGGTGTTGTTATTACTGTTGTGTTTGGCAGTACTTGAAGAAACCAAGGCTGCAGAGCTTGCAAAATG
GCAGATCCATGTTGTGAATCGGCTAAGCAATGGCCAAATCCTGTTGGTTCATTGCAGATCCAAAGACAATGATTTAGGAGAACACAAGCTTAGTGTTGGATCTGAATTCA
ATTGGAGATTTAAAGTAAACTTTTGGAATACGACACTATTTTGGTGTTACTTGCAGAAGCCAAATGGACTACATTCGTCATTCGATGCCTTTTGGATTGAGAGCACATCG
GTTTGGCTCTATGATATGTGCTACGATTCTAACTGCATTTGGATAGCGAAAGATGATGGAATTTATTTGAGAGACAACACTAATCAAAAAGATGTTTTGATTCATAAGTG
GGAATAA
Protein sequenceShow/hide protein sequence
MTKQMETRCMKKQCVVLLLLLCLAVLEETKAAELAKWQIHVVNRLSNGQILLVHCRSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHSSFDAFWIESTS
VWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE