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CcUC01G010530 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G010530
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionNADH-ubiquinone oxidoreductase chain 1
Genome locationCicolChr01:15265663..15267914
RNA-Seq ExpressionCcUC01G010530
SyntenyCcUC01G010530
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGC78971.1 hypothetical protein [Vicia faba]2.4e-0947.62Show/hide
Query:  STKTLVPRSAYRGIEREEMEPELVG-----------------------------------------LGALRSTTQMVPYEVSIGFILIVRLVSAFGFAKA
        S   ++PRSAYRGIERE+  PE VG                                         LGALRS  QMV YEVSIG ILIVRLVSAFG AKA
Subjt:  STKTLVPRSAYRGIEREEMEPELVG-----------------------------------------LGALRSTTQMVPYEVSIGFILIVRLVSAFGFAKA

Query:  IARMF
        IARMF
Subjt:  IARMF

EEF27089.1 conserved hypothetical protein [Ricinus communis]2.3e-1260.24Show/hide
Query:  SHLDSTKTLVPRSAYRGIEREEMEPELVGLG---------------ALRSTTQMVPYEVSIGFILIVRLVSAFGFAKAIARMF
        S  D+   ++P+SAYRGIERE+  PE VGLG               ALRS  QMV YEVSIG ILIVRLVSAFG AKAIARMF
Subjt:  SHLDSTKTLVPRSAYRGIEREEMEPELVGLG---------------ALRSTTQMVPYEVSIGFILIVRLVSAFGFAKAIARMF

KAA0055673.1 hypothetical protein E6C27_scaffold181G00480 [Cucumis melo var. makuwa]2.3e-1272.06Show/hide
Query:  LVPRSAYRGIEREEMEPELV-------GLGALRSTTQMVPYEVSIGFILIVRLVSAFGFAKAIARMFS
        ++ RSAY+GIEREE+E ELV       G GALRST QMVPYEVSI  ILIVRLVSAFG AKAIA MFS
Subjt:  LVPRSAYRGIEREEMEPELV-------GLGALRSTTQMVPYEVSIGFILIVRLVSAFGFAKAIARMFS

KAB1203708.1 hypothetical protein CJ030_MR8G009968 [Morella rubra]3.0e-1265.33Show/hide
Query:  LVPRSAYRGIEREEMEPELVGLG---------------ALRSTTQMVPYEVSIGFILIVRLVSAFGFAKAIARMF
        ++PRSAYRGIERE+  PE VGLG               ALRS  QMV YEVSIG ILIVRLVSAFG AKAIARMF
Subjt:  LVPRSAYRGIEREEMEPELVGLG---------------ALRSTTQMVPYEVSIGFILIVRLVSAFGFAKAIARMF

KAF3452161.1 hypothetical protein FNV43_RR08259 [Rhamnella rubrinervis]1.8e-0964.29Show/hide
Query:  AYRGIEREEMEPELVGLG---------------ALRSTTQMVPYEVSIGFILIVRLVSAFGFAKAIARMF
        A RGIERE++ PE VGLG               ALRS  QMVPYEVSIG ILIVRLVSA G AKAIARMF
Subjt:  AYRGIEREEMEPELVGLG---------------ALRSTTQMVPYEVSIGFILIVRLVSAFGFAKAIARMF

TrEMBL top hitse value%identityAlignment
A0A288W7C9 Orf341.5e-0948.51Show/hide
Query:  LVPRSAYRGIEREEMEPELVG-----------------------------------------LGALRSTTQMVPYEVSIGFILIVRLVSAFGFAKAIARM
        ++PRSAYRGIERE+  PE VG                                         LGALRS  QMV YEVSIG ILIVRLVSAFG AKAIARM
Subjt:  LVPRSAYRGIEREEMEPELVG-----------------------------------------LGALRSTTQMVPYEVSIGFILIVRLVSAFGFAKAIARM

Query:  F
        F
Subjt:  F

A0A5A7UIF7 Uncharacterized protein1.1e-1272.06Show/hide
Query:  LVPRSAYRGIEREEMEPELV-------GLGALRSTTQMVPYEVSIGFILIVRLVSAFGFAKAIARMFS
        ++ RSAY+GIEREE+E ELV       G GALRST QMVPYEVSI  ILIVRLVSAFG AKAIA MFS
Subjt:  LVPRSAYRGIEREEMEPELV-------GLGALRSTTQMVPYEVSIGFILIVRLVSAFGFAKAIARMFS

A0A6A1UV48 Uncharacterized protein1.5e-1265.33Show/hide
Query:  LVPRSAYRGIEREEMEPELVGLG---------------ALRSTTQMVPYEVSIGFILIVRLVSAFGFAKAIARMF
        ++PRSAYRGIERE+  PE VGLG               ALRS  QMV YEVSIG ILIVRLVSAFG AKAIARMF
Subjt:  LVPRSAYRGIEREEMEPELVGLG---------------ALRSTTQMVPYEVSIGFILIVRLVSAFGFAKAIARMF

B9TAM6 Uncharacterized protein1.1e-1260.24Show/hide
Query:  SHLDSTKTLVPRSAYRGIEREEMEPELVGLG---------------ALRSTTQMVPYEVSIGFILIVRLVSAFGFAKAIARMF
        S  D+   ++P+SAYRGIERE+  PE VGLG               ALRS  QMV YEVSIG ILIVRLVSAFG AKAIARMF
Subjt:  SHLDSTKTLVPRSAYRGIEREEMEPELVGLG---------------ALRSTTQMVPYEVSIGFILIVRLVSAFGFAKAIARMF

R4IV52 Uncharacterized protein1.2e-0947.62Show/hide
Query:  STKTLVPRSAYRGIEREEMEPELVG-----------------------------------------LGALRSTTQMVPYEVSIGFILIVRLVSAFGFAKA
        S   ++PRSAYRGIERE+  PE VG                                         LGALRS  QMV YEVSIG ILIVRLVSAFG AKA
Subjt:  STKTLVPRSAYRGIEREEMEPELVG-----------------------------------------LGALRSTTQMVPYEVSIGFILIVRLVSAFGFAKA

Query:  IARMF
        IARMF
Subjt:  IARMF

SwissProt top hitse value%identityAlignment
P08834 NADH-ubiquinone oxidoreductase chain 19.2e-0484.62Show/hide
Query:  LGALRSTTQMVPYEVSIGFILIVRLV
        LGALRS  QMVPYEVSIG ILIVRL+
Subjt:  LGALRSTTQMVPYEVSIGFILIVRLV

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAATTCACATGTAGAAGAGGTACACAACTCCAAGCCAGTAAGTGAGATTTCTGCTCATTGCAGTCACTCCCAGGGTTCTTCGCACCTGGATAGTACCAAG
ACCCTTGTGCCCCGGTCCGCTTACCGAGGAATAGAAAGGGAAGAAATGGAGCCAGAGCTAGTTGGGTTGGGAGCATTACGATCTACAACTCAAATGGTCCCTTAT
GAAGTCTCTATTGGTTTTATTCTTATTGTGCGCCTTGTGAGCGCATTTGGATTCGCGAAGGCAATCGCTCGGATGTTCTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAATTCACATGTAGAAGAGGTACACAACTCCAAGCCAGTAAGTGAGATTTCTGCTCATTGCAGTCACTCCCAGGGTTCTTCGCACCTGGATAGTACCAAG
ACCCTTGTGCCCCGGTCCGCTTACCGAGGAATAGAAAGGGAAGAAATGGAGCCAGAGCTAGTTGGGTTGGGAGCATTACGATCTACAACTCAAATGGTCCCTTAT
GAAGTCTCTATTGGTTTTATTCTTATTGTGCGCCTTGTGAGCGCATTTGGATTCGCGAAGGCAATCGCTCGGATGTTCTCCTAA
Protein sequenceShow/hide protein sequence
MNNSHVEEVHNSKPVSEISAHCSHSQGSSHLDSTKTLVPRSAYRGIEREEMEPELVGLGALRSTTQMVPYEVSIGFILIVRLVSAFGFAKAIARMFS