; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G010600 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G010600
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionmitochondrial import inner membrane translocase subunit PAM16 like 2-like
Genome locationCicolChr01:15589469..15619154
RNA-Seq ExpressionCcUC01G010600
SyntenyCcUC01G010600
Gene Ontology termsGO:0030150 - protein import into mitochondrial matrix (biological process)
GO:0005744 - TIM23 mitochondrial import inner membrane translocase complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR005341 - Mitochondrial import inner membrane translocase subunit Tim16
IPR036869 - Chaperone J-domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035623.1 mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo var. makuwa]9.4e-3390.7Show/hide
Query:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS
        +ASKSGVAQET+Q+TV RASKVMTEQEARQILGVTEE PWEEVVKKYD LFERNAQTGSFYLQSKV RAKERLETLYQ+KGQDAPS
Subjt:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS

KAA0057966.1 mitochondrial import inner membrane translocase subunit Tim16-like isoform X2 [Cucumis melo var. makuwa]4.2e-3389.66Show/hide
Query:  QDASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS
        +DASKSGVAQETIQ+TV RASKVMTEQEARQILGVTEEMPWEE+VKKYD+LFERNAQTGSFYLQSKV RAKERLETLY SK QD PS
Subjt:  QDASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS

KAG7011201.1 Mitochondrial import inner membrane translocase subunit PAM16 like 2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-3290.7Show/hide
Query:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS
        +ASKSGVAQETIQ+TV RASKVMTEQEARQILGVT E PWEE+VKKYD LFERNAQTGSFYLQSKV RAKERLETLYQSKGQDAPS
Subjt:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS

XP_016901365.1 PREDICTED: mitochondrial import inner membrane translocase subunit Tim16-like isoform X2 [Cucumis melo]1.9e-3388.76Show/hide
Query:  PSQDASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS
        P +DASKSGVAQETIQ+TV RASKVMTEQEARQILGVTEEMPWEE+VKKYD+LFERNAQTGSFYLQSKV RAKERLETLY SK QD PS
Subjt:  PSQDASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS

XP_038878395.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Benincasa hispida]9.4e-3389.53Show/hide
Query:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS
        +A+KSGVAQETIQ+TV R SKVMTEQEARQILGVTEEMPWEEV+KKYD LFERNAQTGSFYLQSKV RAKERLET+YQSKGQDAPS
Subjt:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS

TrEMBL top hitse value%identityAlignment
A0A1S3CJP3 mitochondrial import inner membrane translocase subunit tim161.0e-3290.7Show/hide
Query:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS
        +ASKSGVAQET+Q+TV RASKVMTEQEARQILGVTEE PWEEVVKKYD LFERNAQTGSFYLQSKV RAKERLETLYQ KGQDAPS
Subjt:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS

A0A1S4E056 mitochondrial import inner membrane translocase subunit Tim16-like isoform X29.2e-3488.76Show/hide
Query:  PSQDASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS
        P +DASKSGVAQETIQ+TV RASKVMTEQEARQILGVTEEMPWEE+VKKYD+LFERNAQTGSFYLQSKV RAKERLETLY SK QD PS
Subjt:  PSQDASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS

A0A5A7UUY0 Mitochondrial import inner membrane translocase subunit Tim16-like isoform X22.0e-3389.66Show/hide
Query:  QDASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS
        +DASKSGVAQETIQ+TV RASKVMTEQEARQILGVTEEMPWEE+VKKYD+LFERNAQTGSFYLQSKV RAKERLETLY SK QD PS
Subjt:  QDASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS

A0A5D3E4Y7 Mitochondrial import inner membrane translocase subunit tim164.6e-3390.7Show/hide
Query:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS
        +ASKSGVAQET+Q+TV RASKVMTEQEARQILGVTEE PWEEVVKKYD LFERNAQTGSFYLQSKV RAKERLETLYQ+KGQDAPS
Subjt:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS

A0A6J1DR54 mitochondrial import inner membrane translocase subunit PAM16 like 2-like7.8e-3390.7Show/hide
Query:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS
        +ASKSGVAQETIQ+TV RASKVMTEQEARQILGVTEE PWEE+VKKYDTLFERNAQ GSFYLQSKV RAKERLETLYQSK QDAPS
Subjt:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS

SwissProt top hitse value%identityAlignment
Q5M995 Mitochondrial import inner membrane translocase subunit tim16-B3.9e-0560.78Show/hide
Query:  QEARQILGVTEEMPWEEVVKKYDTLFERN--AQTGSFYLQSKVQRAKERLE
        QEA+QIL V++  P EE+ K Y+ LF+ N  A  GSFYLQSKV RAKERL+
Subjt:  QEARQILGVTEEMPWEEVVKKYDTLFERN--AQTGSFYLQSKVQRAKERLE

Q6PBL0 Mitochondrial import inner membrane translocase subunit tim163.0e-0557.41Show/hide
Query:  MTEQEARQILGVTEEMPWEEVVKKYDTLFERN--AQTGSFYLQSKVQRAKERLE
        MT QEA+QIL ++   P EE+ K Y+ LF+ N  A  GSFY+QSKV RAKERL+
Subjt:  MTEQEARQILGVTEEMPWEEVVKKYDTLFERN--AQTGSFYLQSKVQRAKERLE

Q93VV9 Mitochondrial import inner membrane translocase subunit PAM16 like 24.9e-2466.28Show/hide
Query:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS
        +ASKSGVAQE +Q+ V +A K +TEQEARQILGVTE+  WEE+++KYD LFE NA+ GSFYLQSKV RAKE LE +Y+S+G   PS
Subjt:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS

Q93W66 Mitochondrial import inner membrane translocase subunit PAM16 like 14.7e-1967.95Show/hide
Query:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQ
        +ASK+GVA E  Q T+ R   +  E EARQILGVTE+  W+E++KKYDTLFERNAQ GSFYLQSKV RAKE LET YQ
Subjt:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQ

Q9Y3D7 Mitochondrial import inner membrane translocase subunit TIM163.9e-0547.3Show/hide
Query:  HTVSRASKV--MTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQT--GSFYLQSKVQRAKERLETLYQSKGQD
        H  + AS +  ++ QEA+QIL V++  P EEV K Y+ LF+ N ++  GSFYLQSKV RAKERL+   + + Q+
Subjt:  HTVSRASKV--MTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQT--GSFYLQSKVQRAKERLETLYQSKGQD

Arabidopsis top hitse value%identityAlignment
AT3G59280.1 Protein Transporter, Pam163.5e-2566.28Show/hide
Query:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS
        +ASKSGVAQE +Q+ V +A K +TEQEARQILGVTE+  WEE+++KYD LFE NA+ GSFYLQSKV RAKE LE +Y+S+G   PS
Subjt:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQSKGQDAPS

AT5G61880.1 Protein Transporter, Pam163.4e-2067.95Show/hide
Query:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQ
        +ASK+GVA E  Q T+ R   +  E EARQILGVTE+  W+E++KKYDTLFERNAQ GSFYLQSKV RAKE LET YQ
Subjt:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQ

AT5G61880.2 Protein Transporter, Pam163.4e-2067.95Show/hide
Query:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQ
        +ASK+GVA E  Q T+ R   +  E EARQILGVTE+  W+E++KKYDTLFERNAQ GSFYLQSKV RAKE LET YQ
Subjt:  DASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVQRAKERLETLYQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAAGCCGCTCGACAAGTATTGGTTCTTCTCACCGGCTCCTGGCGGCAGACATAGCCAAGCTCCGCCACCACCCCACAACCATATTTCATTTCTTTCTCTCCCTCT
CCATCGCTGCAAACCTCCATCTCAAGATGCTTCAAAGTCGGGTGTTGCTCAAGAAACAATACAACACACTGTTAGTAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCGA
GGCAGATTCTCGGCGTTACCGAGGAAATGCCTTGGGAAGAAGTTGTGAAGAAATATGACACTTTGTTTGAAAGGAATGCTCAAACTGGAAGCTTTTATCTTCAGTCAAAA
GTTCAGAGAGCCAAGGAACGATTAGAAACTCTCTATCAGAGCAAAGGTCAAGATGCCCCTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCAAGCCGCTCGACAAGTATTGGTTCTTCTCACCGGCTCCTGGCGGCAGACATAGCCAAGCTCCGCCACCACCCCACAACCATATTTCATTTCTTTCTCTCCCTCT
CCATCGCTGCAAACCTCCATCTCAAGATGCTTCAAAGTCGGGTGTTGCTCAAGAAACAATACAACACACTGTTAGTAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCGA
GGCAGATTCTCGGCGTTACCGAGGAAATGCCTTGGGAAGAAGTTGTGAAGAAATATGACACTTTGTTTGAAAGGAATGCTCAAACTGGAAGCTTTTATCTTCAGTCAAAA
GTTCAGAGAGCCAAGGAACGATTAGAAACTCTCTATCAGAGCAAAGGTCAAGATGCCCCTAGTTGAGGACCCCGAGGAATGTGTTGTGTTTTGCACATTTTACTCATCTT
GTATAATTTTTATTTTGGTCATGGTTCGTAAGAATGATGAAATTAGTGCTAAGTCTTTTCTCATTTACATATCATTTCCTTTCTAATTCAAGCCAAGGTAGTATGTAAAT
TATCATTTGGACAATTGCATATCGCAATCTAACACAATAATAGAAAAGTCAACTCAATTCAAAGCTATTTGCAAATATTGCAGAATTTTAATTTCAATCCGTATGAGGAC
CTATCAATTTTAGAGATGTATCACAGATGTAC
Protein sequenceShow/hide protein sequence
MCKPLDKYWFFSPAPGGRHSQAPPPPHNHISFLSLPLHRCKPPSQDASKSGVAQETIQHTVSRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSK
VQRAKERLETLYQSKGQDAPS