; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G010660 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G010660
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationCicolChr01:15746490..15842241
RNA-Seq ExpressionCcUC01G010660
SyntenyCcUC01G010660
Gene Ontology termsGO:0009791 - post-embryonic development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065439.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]4.0e-1185.71Show/hide
Query:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPS
        EY CDTTSC TSTLWKHLK QCKKYPYKE E GQTILTLQ S
Subjt:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPS
KAA0067548.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]4.0e-1185.71Show/hide
Query:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPS
        EY CDTTSC TSTLWKHLK QCKKYPYKE E GQTILTLQ S
Subjt:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPS
KAE8648052.1 hypothetical protein Csa_005813 [Cucumis sativus]2.8e-1284.09Show/hide
Query:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPSHG
        EY CDTTSC TSTLWKHLK QCKKYPYKE E GQTILTL+PS G
Subjt:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPSHG
TYK16769.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]4.0e-1185.71Show/hide
Query:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPS
        EY CDTTSC TSTLWKHLK QCKKYPYKE E GQTILTLQ S
Subjt:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPS
TYK26605.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]4.0e-1185.71Show/hide
Query:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPS
        EY CDTTSC TSTLWKHLK QCKKYPYKE E GQTILTLQ S
Subjt:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPS
TrEMBL top hitse value%identityAlignment
A0A5A7SRD2 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.9e-1185.71Show/hide
Query:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPS
        EY CDTTSC TSTLWKHLK QCKKYPYKE E GQTILTLQ S
Subjt:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPS
A0A5A7VIJ7 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.9e-1185.71Show/hide
Query:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPS
        EY CDTTSC TSTLWKHLK QCKKYPYKE E GQTILTLQ S
Subjt:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPS
A0A5D3C9B8 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.9e-1185.71Show/hide
Query:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPS
        EY CDTTSC TSTLWKHLK QCKKYPYKE E GQTILTLQ S
Subjt:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPS
A0A5D3D2K8 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.9e-1185.71Show/hide
Query:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPS
        EY CDTTSC TSTLWKHLK QCKKYPYKE E GQTILTLQ S
Subjt:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPS
A0A5D3DTE1 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.9e-1185.71Show/hide
Query:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPS
        EY CDTTSC TSTLWKHLK QCKKYPYKE E GQTILTLQ S
Subjt:  EYACDTTSCRTSTLWKHLKKQCKKYPYKEEEKGQTILTLQPS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCCACTGACCAAATCTAACTGTGACCTTGCCGCTATGATTGACAATATCGACACAAAGAGGAGAAGTGAAGCCATGAAAAAAAGAAACCTAGCCATTGTGATCAA
GTTTGAAGCTGATGATGAAGAGTATTTGATGGGTTTTGAAAGAAGAGATGATTTTAATTTACATTTGAATTACTATCCAACTTCAGTTTTTGAAAAGTTAAAAACTGTGT
TTTTAAGACATAATTTCGAGTATGCATGTGATACTACTTCTTGTAGAACTAGCACATTATGGAAACACTTAAAAAAACAGTGTAAGAAGTATCCATATAAGGAGGAGGAA
AAAGGACAAACTATTTTGACTCTTCAACCTTCTCATGGAAATGTAGCGACCAAAATGCAATTGCATGATTATCTTTTAATATTTAATGATGGTAAGGATTTGAATTTTAA
TAAGTTCAAACATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGCCACTGACCAAATCTAACTGTGACCTTGCCGCTATGATTGACAATATCGACACAAAGAGGAGAAGTGAAGCCATGAAAAAAAGAAACCTAGCCATTGTGATCAA
GTTTGAAGCTGATGATGAAGAGTATTTGATGGGTTTTGAAAGAAGAGATGATTTTAATTTACATTTGAATTACTATCCAACTTCAGTTTTTGAAAAGTTAAAAACTGTGT
TTTTAAGACATAATTTCGAGTATGCATGTGATACTACTTCTTGTAGAACTAGCACATTATGGAAACACTTAAAAAAACAGTGTAAGAAGTATCCATATAAGGAGGAGGAA
AAAGGACAAACTATTTTGACTCTTCAACCTTCTCATGGAAATGTAGCGACCAAAATGCAATTGCATGATTATCTTTTAATATTTAATGATGGTAAGGATTTGAATTTTAA
TAAGTTCAAACATTAA
Protein sequenceShow/hide protein sequence
MMPLTKSNCDLAAMIDNIDTKRRSEAMKKRNLAIVIKFEADDEEYLMGFERRDDFNLHLNYYPTSVFEKLKTVFLRHNFEYACDTTSCRTSTLWKHLKKQCKKYPYKEEE
KGQTILTLQPSHGNVATKMQLHDYLLIFNDGKDLNFNKFKH