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CcUC01G011900 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G011900
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr01:20855033..20868314
RNA-Seq ExpressionCcUC01G011900
SyntenyCcUC01G011900
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027900.1 hypothetical protein SDJN02_09079, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-0864.91Show/hide
Query:  MPSPHIRKMMAGSKMVGNMDCLLGLLNEVCQIFVKSTEGNGIGKVKSKFLRTVTNEC
        MPSPH + MMA SKMVGNM CLLGLL+EV QI VKSTEGN I KV    + T    C
Subjt:  MPSPHIRKMMAGSKMVGNMDCLLGLLNEVCQIFVKSTEGNGIGKVKSKFLRTVTNEC
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGTCCGATCGCGCCAGCCGTCGTTACACACACGTTGCCGGTCTTTAACGATGCTGTCAGTTCTGCCACCACCATGATTTCACTGTCACCGCTTGTCGAACCTAG
TTGGATTGGATGGAACTACCAAGGAATCAGAAGTTTCACTATCATCATCATCATCATCTCTGTTGCAGCGGCTCTGCAACTAAATACTATGCCATCTCCACATATAAGGA
AGATGATGGCTGGAAGCAAGATGGTCGGCAATATGGACTGCTTGCTCGGTCTCTTGAATGAGGTTTGTCAGATTTTTGTGAAGTCCACGGAAGGAAATGGAATTGGAAAA
GTGAAATCCAAATTCCTAAGAACAGTGACGAATGAATGTTCATCACAACGGTGTAGTTATAAAGATCCAACGGTCGAGGATGAAGCATTGATGTCAACATTTTTCTTTCC
GTGGAAGCCTTTCACATCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGTCCGATCGCGCCAGCCGTCGTTACACACACGTTGCCGGTCTTTAACGATGCTGTCAGTTCTGCCACCACCATGATTTCACTGTCACCGCTTGTCGAACCTAG
TTGGATTGGATGGAACTACCAAGGAATCAGAAGTTTCACTATCATCATCATCATCATCTCTGTTGCAGCGGCTCTGCAACTAAATACTATGCCATCTCCACATATAAGGA
AGATGATGGCTGGAAGCAAGATGGTCGGCAATATGGACTGCTTGCTCGGTCTCTTGAATGAGGTTTGTCAGATTTTTGTGAAGTCCACGGAAGGAAATGGAATTGGAAAA
GTGAAATCCAAATTCCTAAGAACAGTGACGAATGAATGTTCATCACAACGGTGTAGTTATAAAGATCCAACGGTCGAGGATGAAGCATTGATGTCAACATTTTTCTTTCC
GTGGAAGCCTTTCACATCGTGA
Protein sequenceShow/hide protein sequence
MESPIAPAVVTHTLPVFNDAVSSATTMISLSPLVEPSWIGWNYQGIRSFTIIIIIISVAAALQLNTMPSPHIRKMMAGSKMVGNMDCLLGLLNEVCQIFVKSTEGNGIGK
VKSKFLRTVTNECSSQRCSYKDPTVEDEALMSTFFFPWKPFTS