; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G012500 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G012500
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionStress-response A/B barrel domain-containing protein
Genome locationCicolChr01:23701756..23703022
RNA-Seq ExpressionCcUC01G012500
SyntenyCcUC01G012500
Gene Ontology termsNA
InterPro domainsIPR011008 - Dimeric alpha-beta barrel
IPR013097 - Stress responsive alpha-beta barrel
IPR044662 - Stress-response A/B barrel domain-containing protein HS1/DABB1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040939.1 stress-response A/B barrel domain-containing protein [Cucumis melo var. makuwa]6.7e-5368.75Show/hide
Query:  KTTMAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFS
        +TTM EFKHLVV KFKEGVNVDEIVEQVEKMVSDIDSVK FEW                                      GHD+EGQDMLTQGFTHVFS
Subjt:  KTTMAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFS

Query:  MTFDDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSPPPPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPAPTPASAS
        MTFDDKEAITSFLTHPKHLEFCPTFSAAID+IVVLDFPS+LVK  APPPS PP PP  E TPE ALPPVLTST L  P P  A APTPASAS
Subjt:  MTFDDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSPPPPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPAPTPASAS

XP_004139472.2 stress-response A/B barrel domain-containing protein At5g22580 [Cucumis sativus]2.4e-5062.8Show/hide
Query:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTF
        M EFKHLVV KFKEG+NVDEIV QVEKMVSDIDSVKSFEW                                      GHD+EGQDMLTQGFTHVFSMTF
Subjt:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTF

Query:  DDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSP------------------PPPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPA
        DDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPS+LVK   PPPSP                  P PPP +E TPE ALPPVLTSTPL  P P  A A
Subjt:  DDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSP------------------PPPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPA

Query:  PTPASAS
         TPASAS
Subjt:  PTPASAS

XP_008461858.1 PREDICTED: stress-response A/B barrel domain-containing protein At5g22580-like [Cucumis melo]1.3e-5168.78Show/hide
Query:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTF
        M EFKHLVV KFKEGVNVDEIVEQVEKMVSDIDSVK FEW                                      GHD+EGQDMLTQGFTHVFSMTF
Subjt:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTF

Query:  DDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSPPPPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPAPTPASAS
        DDKEAITSFLTHPKHLEFCPTFSAAID+IVVLDFPS+LVK  APPPS PP PP  E TPE ALPPVLTST L  P P  A APTPASAS
Subjt:  DDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSPPPPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPAPTPASAS

XP_022142413.1 stress-response A/B barrel domain-containing protein At5g22580-like [Momordica charantia]1.3e-4864.21Show/hide
Query:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTF
        M EFKHLV+ KFKEGVNV+EIVEQVEK+VSDIDSVKSFEW                                      GH+ EGQ+MLTQGFTHV SMTF
Subjt:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTF

Query:  DDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPP--PSPPPPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPAPTPASA
        DDKE ITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVK P PP  P PP PP     +PE   PP LTSTPL PPVPT A APT ASA
Subjt:  DDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPP--PSPPPPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPAPTPASA

XP_038893880.1 stress-response A/B barrel domain-containing protein At5g22580-like [Benincasa hispida]2.5e-5571.2Show/hide
Query:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTF
        MAEFKHLVVVKFKEGVNVDEIVEQVEKMVS IDSVKSFEW                                      GHD+EGQDMLTQGFTHVFSMTF
Subjt:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTF

Query:  DDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSPP--PPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPAPTPASAS
        DDKEAITSFLTHPKH+EFCPTFSAAIDKIVVLDFPSLLVK PAPPPS P  PPPP VE  PE A PPVLTSTPL  P P  APAPTPASAS
Subjt:  DDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSPP--PPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPAPTPASAS

TrEMBL top hitse value%identityAlignment
A0A0A0LY53 Stress-response A/B barrel domain-containing protein3.6e-5268.78Show/hide
Query:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTF
        M EFKHLVV KFKEG+NVDEIV QVEKMVSDIDSVKSFEW                                      GHD+EGQDMLTQGFTHVFSMTF
Subjt:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTF

Query:  DDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSPPPPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPAPTPASAS
        DDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPS+LVK   PPPSP PPP L E TPE ALPPVLTSTPL  P P  A A TPASAS
Subjt:  DDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSPPPPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPAPTPASAS

A0A1S3CFK4 stress-response A/B barrel domain-containing protein At5g22580-like6.1e-5268.78Show/hide
Query:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTF
        M EFKHLVV KFKEGVNVDEIVEQVEKMVSDIDSVK FEW                                      GHD+EGQDMLTQGFTHVFSMTF
Subjt:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTF

Query:  DDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSPPPPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPAPTPASAS
        DDKEAITSFLTHPKHLEFCPTFSAAID+IVVLDFPS+LVK  APPPS PP PP  E TPE ALPPVLTST L  P P  A APTPASAS
Subjt:  DDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSPPPPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPAPTPASAS

A0A5A7TI03 Stress-response A/B barrel domain-containing protein3.2e-5368.75Show/hide
Query:  KTTMAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFS
        +TTM EFKHLVV KFKEGVNVDEIVEQVEKMVSDIDSVK FEW                                      GHD+EGQDMLTQGFTHVFS
Subjt:  KTTMAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFS

Query:  MTFDDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSPPPPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPAPTPASAS
        MTFDDKEAITSFLTHPKHLEFCPTFSAAID+IVVLDFPS+LVK  APPPS PP PP  E TPE ALPPVLTST L  P P  A APTPASAS
Subjt:  MTFDDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSPPPPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPAPTPASAS

A0A6J1CN73 stress-response A/B barrel domain-containing protein At5g22580-like6.3e-4964.21Show/hide
Query:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTF
        M EFKHLV+ KFKEGVNV+EIVEQVEK+VSDIDSVKSFEW                                      GH+ EGQ+MLTQGFTHV SMTF
Subjt:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTF

Query:  DDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPP--PSPPPPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPAPTPASA
        DDKE ITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVK P PP  P PP PP     +PE   PP LTSTPL PPVPT A APT ASA
Subjt:  DDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPP--PSPPPPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPAPTPASA

A0A6J1I2Y7 stress-response A/B barrel domain-containing protein At5g22580-like2.5e-4562.5Show/hide
Query:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTF
        MAEFKHLV+ KFKE VNV+EIVEQVEKMVSDID VKSFEW                                      GHD+EGQDM+TQGFTHVFSMTF
Subjt:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTF

Query:  DDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPA-PPPSPPPPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPAP
        DDKEAI SFLTHPKHLEFCPTFSAAIDKI+VLDFPSLLVK PA PPPSP   PP V  +  +  PP   S P  PP PTPA AP
Subjt:  DDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPA-PPPSPPPPPPLVEMTPEVALPPVLTSTPLSPPVPTPAPAP

SwissProt top hitse value%identityAlignment
Q9FK81 Stress-response A/B barrel domain-containing protein At5g225806.8e-2444.93Show/hide
Query:  FKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTFDDK
        FKHLVVVKFKE   VDEI++ +E +VS ID+VKSFEW                                      G D E  DML QGFTH FSMTF++K
Subjt:  FKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTFDDK

Query:  EAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKT
        +   +F +HP H+EF   F+A IDKIV+LDFP   VK+
Subjt:  EAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKT

Q9LUV2 Stress-response A/B barrel domain-containing protein HS16.2e-0936.59Show/hide
Query:  PQVLLELEMGNANILLL-----GLDRGHDMEGQDMLTQGFTHVFSMTFDDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDF
        P+ + EL  G AN++ L         G D+  ++ L QG+TH+F  TF+ KEA+  ++ HP H+EF   F  ++DK++V+D+
Subjt:  PQVLLELEMGNANILLL-----GLDRGHDMEGQDMLTQGFTHVFSMTFDDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDF

Arabidopsis top hitse value%identityAlignment
AT3G17210.1 heat stable protein 14.4e-1036.59Show/hide
Query:  PQVLLELEMGNANILLL-----GLDRGHDMEGQDMLTQGFTHVFSMTFDDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDF
        P+ + EL  G AN++ L         G D+  ++ L QG+TH+F  TF+ KEA+  ++ HP H+EF   F  ++DK++V+D+
Subjt:  PQVLLELEMGNANILLL-----GLDRGHDMEGQDMLTQGFTHVFSMTFDDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDF

AT5G22580.1 Stress responsive A/B Barrel Domain4.8e-2544.93Show/hide
Query:  FKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTFDDK
        FKHLVVVKFKE   VDEI++ +E +VS ID+VKSFEW                                      G D E  DML QGFTH FSMTF++K
Subjt:  FKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLLELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTFDDK

Query:  EAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKT
        +   +F +HP H+EF   F+A IDKIV+LDFP   VK+
Subjt:  EAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCAGTCAACATGGAAACAAAGCCAAGCATTACTGCATCAGCCATAGCCAATTTTAGGCGATTGATTGCTACAATAAGAAAAGCCAACCCGGAAAATGGAACGTG
GGGTGTGTCAGCGGACAGAGGGGGAAAAACCACCATGGCCGAGTTCAAGCACCTTGTTGTTGTCAAGTTTAAGGAGGGTGTGAATGTGGATGAAATTGTGGAGCAAGTGG
AGAAGATGGTTTCTGATATTGACTCTGTCAAGTCCTTTGAGTGGTATTTCTCCCGTTTTAAGTCCCCTTTCTCACCCCTACTCATGCATACTATCCCTCAAGTGTTGTTG
GAACTTGAAATGGGTAATGCAAATATACTACTGCTTGGCTTGGACAGGGGACATGATATGGAAGGCCAAGACATGCTGACACAAGGCTTCACGCACGTCTTCTCAATGAC
GTTTGATGACAAAGAAGCCATCACTTCATTTCTTACCCATCCTAAGCATCTTGAATTCTGTCCCACTTTCAGTGCAGCCATTGACAAGATTGTAGTCCTTGATTTCCCAT
CACTTCTTGTCAAGACACCTGCACCACCTCCATCACCGCCACCGCCACCGCCACTAGTGGAAATGACACCGGAAGTTGCTTTACCACCAGTGCTGACATCCACACCTCTA
TCACCACCAGTACCAACACCTGCCCCTGCCCCTACACCGGCATCTGCTTCAGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCAGTCAACATGGAAACAAAGCCAAGCATTACTGCATCAGCCATAGCCAATTTTAGGCGATTGATTGCTACAATAAGAAAAGCCAACCCGGAAAATGGAACGTG
GGGTGTGTCAGCGGACAGAGGGGGAAAAACCACCATGGCCGAGTTCAAGCACCTTGTTGTTGTCAAGTTTAAGGAGGGTGTGAATGTGGATGAAATTGTGGAGCAAGTGG
AGAAGATGGTTTCTGATATTGACTCTGTCAAGTCCTTTGAGTGGTATTTCTCCCGTTTTAAGTCCCCTTTCTCACCCCTACTCATGCATACTATCCCTCAAGTGTTGTTG
GAACTTGAAATGGGTAATGCAAATATACTACTGCTTGGCTTGGACAGGGGACATGATATGGAAGGCCAAGACATGCTGACACAAGGCTTCACGCACGTCTTCTCAATGAC
GTTTGATGACAAAGAAGCCATCACTTCATTTCTTACCCATCCTAAGCATCTTGAATTCTGTCCCACTTTCAGTGCAGCCATTGACAAGATTGTAGTCCTTGATTTCCCAT
CACTTCTTGTCAAGACACCTGCACCACCTCCATCACCGCCACCGCCACCGCCACTAGTGGAAATGACACCGGAAGTTGCTTTACCACCAGTGCTGACATCCACACCTCTA
TCACCACCAGTACCAACACCTGCCCCTGCCCCTACACCGGCATCTGCTTCAGTATGA
Protein sequenceShow/hide protein sequence
MDAVNMETKPSITASAIANFRRLIATIRKANPENGTWGVSADRGGKTTMAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPLLMHTIPQVLL
ELEMGNANILLLGLDRGHDMEGQDMLTQGFTHVFSMTFDDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSPPPPPPLVEMTPEVALPPVLTSTPL
SPPVPTPAPAPTPASASV