; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC01G012560 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC01G012560
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionSenescence-associated protein
Genome locationCicolChr01:23928169..23957716
RNA-Seq ExpressionCcUC01G012560
SyntenyCcUC01G012560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1212992.1 putative uncharacterized protein ART2, partial [Morella rubra]2.1e-2859.23Show/hide
Query:  CRDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLML-
        CR   RRGL F+ +AR  +REA+V P   +         GA MRD QADVPSA+RL AQLAFK+S++RGILQFTPSIAFRYVLHRCESRDIRCRES  + 
Subjt:  CRDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLML-

Query:  ----RPPHAEAGAGGRQIHFKFLGATCAGV
            +P H  +GA G  +  KFLGA  AGV
Subjt:  ----RPPHAEAGAGGRQIHFKFLGATCAGV

KAB1223221.1 hypothetical protein CJ030_MR2G003178 [Morella rubra]2.1e-2859.23Show/hide
Query:  CRDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLML-
        CR   RRGL F+ +AR  +REA+V P   +         GA MRD QADVPSA+RL AQLAFK+S++RGILQFTPSIAFRYVLHRCESRDIRCRES  + 
Subjt:  CRDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLML-

Query:  ----RPPHAEAGAGGRQIHFKFLGATCAGV
            +P H  +GA G  +  KFLGA  AGV
Subjt:  ----RPPHAEAGAGGRQIHFKFLGATCAGV

KAG6384451.1 hypothetical protein SASPL_155737 [Salvia splendens]1.5e-2669.7Show/hide
Query:  CRDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLML
        CR D RRGL+F+P+    ARE S+ P P +   V     GA MRDAQADVPSA+ LRAQLAFKDS+V GILQFTPSIAFRYVLHRCESRDIRCRES  L
Subjt:  CRDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLML

TKR97778.1 senescence-associated protein [Populus alba]3.6e-2568Show/hide
Query:  RDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLMLRP
        R D RRGL+F P+A   ARE S+ P P +         GA MRD QADVPS RR RAQLAFKDS+V GILQFTPSIAFRYVLHRCESRDIRCRES  L P
Subjt:  RDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLMLRP

TKS06010.1 hypothetical protein D5086_0000127420 [Populus alba]2.7e-2855.84Show/hide
Query:  RDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLMLRP
        R D RRGL+F P+A   ARE S+ P P +         GA MRD QADVPS RR RAQLAFKDS+V GILQFTPSIAFRYVLHRCESRDIRCRES  L P
Subjt:  RDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLMLRP

Query:  PHAEAGA------GGRQIHFKFLGATCAGVWFRRAEGEGTH----REHASPRPP
           E GA       G  +   FLGA+ AGV  R A+G        R H    PP
Subjt:  PHAEAGA------GGRQIHFKFLGATCAGVWFRRAEGEGTH----REHASPRPP

TrEMBL top hitse value%identityAlignment
A0A6A1WDF0 Uncharacterized protein1.0e-2859.23Show/hide
Query:  CRDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLML-
        CR   RRGL F+ +AR  +REA+V P   +         GA MRD QADVPSA+RL AQLAFK+S++RGILQFTPSIAFRYVLHRCESRDIRCRES  + 
Subjt:  CRDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLML-

Query:  ----RPPHAEAGAGGRQIHFKFLGATCAGV
            +P H  +GA G  +  KFLGA  AGV
Subjt:  ----RPPHAEAGAGGRQIHFKFLGATCAGV

A0A6N2K2Z3 Uncharacterized protein2.0e-2955.56Show/hide
Query:  CRDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLMLR
        CR D RRGL+F+P+    ARE S+ P P +   V     GA MRD QADVPS RR RAQLAFKDS+V GILQFTPSIAFRYVLHRCESRDIRCRES  L 
Subjt:  CRDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLMLR

Query:  PPHA---EAGAGGRQIHFKFLGATCAGVWFRRAEG-----EGTHREHASPRPP
                 G  G  +   FLGA+ AGV +R   G      GT R H    PP
Subjt:  PPHA---EAGAGGRQIHFKFLGATCAGVWFRRAEG-----EGTHREHASPRPP

A0A6N2KY05 Uncharacterized protein3.4e-2954.67Show/hide
Query:  CRDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLMLR
        CR + RRGL+F+P+    ARE S+ P P +   V     GA MRD QADVPS RR RAQLAFKDS+V GILQFTPSIAFRYVLHRCESRDIRCRES  L 
Subjt:  CRDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLMLR

Query:  PPHAEAGAGGRQIHFKFLGATCAGVWFRRAEG-----EGTHREHASPRPP
                   ++   FLGA+ AGV +R   G      GT R H    PP
Subjt:  PPHAEAGAGGRQIHFKFLGATCAGVWFRRAEG-----EGTHREHASPRPP

A0A6N2MTU4 Uncharacterized protein7.7e-2957.78Show/hide
Query:  CRDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLMLR
        CR + RRGL+F+P+    ARE S+ P P +   V     GA MRD QADVPS RR RAQLAFKDS+V GILQFTPSIAFRYVLHRCESRDIRCRES  L 
Subjt:  CRDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLMLR

Query:  PPHA---EAGAGGRQIHFKFLGATCAGVWFRRAEG
                 G  G  +   FLGA+ AGV +R   G
Subjt:  PPHA---EAGAGGRQIHFKFLGATCAGVWFRRAEG

A0A6N2NEU6 Uncharacterized protein7.7e-2954.9Show/hide
Query:  CRDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLMLR
        CR + RRGL+F+P+    ARE S+ P P +   V     GA MRD QADVPS RR RAQLAFKDS+V GILQFTPSIAFRYVLHRCESRDIRCRES  L 
Subjt:  CRDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLMLR

Query:  PPHA---EAGAGGRQIHFKFLGATCAGVWFRRAEG-----EGTHREHASPRPP
                 G  G  +   FLGA+ AGV +R   G      GT R H    PP
Subjt:  PPHA---EAGAGGRQIHFKFLGATCAGVWFRRAEG-----EGTHREHASPRPP

SwissProt top hitse value%identityAlignment
O48905 Malate dehydrogenase, cytoplasmic8.2e-0470Show/hide
Query:  GLKIGEFSRAKMDATTKELIEEKNLAYSCL
        GL I EFSR K+D T +EL EEKNLA+SCL
Subjt:  GLKIGEFSRAKMDATTKELIEEKNLAYSCL

Q08062 Malate dehydrogenase, cytoplasmic1.7e-0476.67Show/hide
Query:  GLKIGEFSRAKMDATTKELIEEKNLAYSCL
        GL I EFSR KMDAT +EL EEK LAYSCL
Subjt:  GLKIGEFSRAKMDATTKELIEEKNLAYSCL

Q7XDC8 Malate dehydrogenase, cytoplasmic2.2e-0476.67Show/hide
Query:  GLKIGEFSRAKMDATTKELIEEKNLAYSCL
        GL I EFSR KMDAT +EL EEK LAYSCL
Subjt:  GLKIGEFSRAKMDATTKELIEEKNLAYSCL

Q9FSF0 Malate dehydrogenase8.2e-0473.33Show/hide
Query:  GLKIGEFSRAKMDATTKELIEEKNLAYSCL
        GL I EFSR K+DAT +EL EEK LAYSCL
Subjt:  GLKIGEFSRAKMDATTKELIEEKNLAYSCL

Arabidopsis top hitse value%identityAlignment
AT1G04410.1 Lactate/malate dehydrogenase family protein3.8e-0470Show/hide
Query:  GLKIGEFSRAKMDATTKELIEEKNLAYSCL
        GL I E SR KMD T +EL EEK+LAYSCL
Subjt:  GLKIGEFSRAKMDATTKELIEEKNLAYSCL

AT5G56720.1 Lactate/malate dehydrogenase family protein7.6e-0570Show/hide
Query:  GLKIGEFSRAKMDATTKELIEEKNLAYSCL
        GL I EFSR KMD + +EL EEK+LAYSCL
Subjt:  GLKIGEFSRAKMDATTKELIEEKNLAYSCL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCTGTCGCGACGACGTGCGCCGAGGACTCGAATTTAAGCCATCCGCACGACGGTGCGCACGGGAGGCCAGTGTGTGCCCCCTGCCTACGCAACGAGCCCGC
GTGGGGTGTTGTGTGGGGGGGGCAGCGATGCGTGACGCCCAGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCGC
GGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTAATGCTCCGCCCCCCGCAC
GCCGAGGCCGGGGCAGGGGGCAGGCAAATTCATTTCAAGTTCCTTGGCGCGACCTGCGCCGGGGTTTGGTTTAGGCGTGCAGAGGGGGAGGGGACACACAGAGAG
CATGCTTCCCCCCGCCCCCCGGGGCAGACAAAAATAGTAGCCAAAAGGAGACAAGCTCTTAACGAAGAAGCCACTACCATGCCACCACTAGAGGCTACAGTTCGG
ATGAAAGGAGGTAAGACCGGGTTCAACTCTAAACATTCTTCCTCCTCTTCTAAAACTAAAGTTCAAGGTGAATCTTTGCCATTAGAGGACTTCGCCAAAGAGAAT
GAGTTGGAGGCTTTGACTCAACATCCAGCAGGGCTCAAGATTGGTGAGTTTTCAAGAGCCAAGATGGATGCAACAACAAAAGAGTTGATTGAGGAGAAAAATTTG
GCTTATTCCTGCCTTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCTGTCGCGACGACGTGCGCCGAGGACTCGAATTTAAGCCATCCGCACGACGGTGCGCACGGGAGGCCAGTGTGTGCCCCCTGCCTACGCAACGAGCCCGC
GTGGGGTGTTGTGTGGGGGGGGCAGCGATGCGTGACGCCCAGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCGC
GGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTAATGCTCCGCCCCCCGCAC
GCCGAGGCCGGGGCAGGGGGCAGGCAAATTCATTTCAAGTTCCTTGGCGCGACCTGCGCCGGGGTTTGGTTTAGGCGTGCAGAGGGGGAGGGGACACACAGAGAG
CATGCTTCCCCCCGCCCCCCGGGGCAGACAAAAATAGTAGCCAAAAGGAGACAAGCTCTTAACGAAGAAGCCACTACCATGCCACCACTAGAGGCTACAGTTCGG
ATGAAAGGAGGTAAGACCGGGTTCAACTCTAAACATTCTTCCTCCTCTTCTAAAACTAAAGTTCAAGGTGAATCTTTGCCATTAGAGGACTTCGCCAAAGAGAAT
GAGTTGGAGGCTTTGACTCAACATCCAGCAGGGCTCAAGATTGGTGAGTTTTCAAGAGCCAAGATGGATGCAACAACAAAAGAGTTGATTGAGGAGAAAAATTTG
GCTTATTCCTGCCTTGGTTGA
Protein sequenceShow/hide protein sequence
MRCRDDVRRGLEFKPSARRCAREASVCPLPTQRARVGCCVGGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESLMLRPPH
AEAGAGGRQIHFKFLGATCAGVWFRRAEGEGTHREHASPRPPGQTKIVAKRRQALNEEATTMPPLEATVRMKGGKTGFNSKHSSSSSKTKVQGESLPLEDFAKEN
ELEALTQHPAGLKIGEFSRAKMDATTKELIEEKNLAYSCLG